RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 A0A087WV48 116 aa11.38□□□□□ -0.59
TPM1-209ENST00000558072 FAM47E-STBD1D6RA91 191 aa11.38□□□□□ -0.59
TPM1-209ENST00000558072 GNGT2O14610 69 aa11.38□□□□□ -0.59
TPM1-209ENST00000558072 MGRN1O60291 552 aa11.38□□□□□ -0.59
TPM1-209ENST00000558072 FADS1O60427 444 aa11.38□□□□□ -0.59
TPM1-209ENST00000558072 MAN1A2O60476 641 aa11.38□□□□□ -0.59
TPM1-209ENST00000558072 ICOSLGO75144 302 aa11.38□□□□□ -0.59
TPM1-209ENST00000558072 OPN1SWP03999 348 aa11.38□□□□□ -0.59
TPM1-209ENST00000558072 THRBP10828 461 aa11.38□□□□□ -0.59
TPM1-209ENST00000558072 MAGEA2P43356 314 aa11.38□□□□□ -0.59
TPM1-209ENST00000558072 CCL11P51671 97 aa11.38□□□□□ -0.59
TPM1-209ENST00000558072 RGS8P57771 180 aaPredicted RBP11.38□□□□□ -0.59
TPM1-209ENST00000558072 FBXW4P57775 412 aa11.38□□□□□ -0.59
TPM1-209ENST00000558072 MRPL2Q5T653 305 aaKnown RBP11.38□□□□□ -0.59
TPM1-209ENST00000558072 FCRLBQ6BAA4 426 aa11.38□□□□□ -0.59
TPM1-209ENST00000558072 BORAQ6PGQ7 559 aa11.38□□□□□ -0.59
TPM1-209ENST00000558072 LYPD8Q6UX82 237 aa11.38□□□□□ -0.59
TPM1-209ENST00000558072 PACS2Q86VP3 889 aa11.38□□□□□ -0.59
TPM1-209ENST00000558072 CARM1Q86X55 608 aa11.38□□□□□ -0.59
TPM1-209ENST00000558072 VRK2Q86Y07 508 aa11.38□□□□□ -0.59
TPM1-209ENST00000558072 ZDHHC21Q8IVQ6 265 aa11.38□□□□□ -0.59
TPM1-209ENST00000558072 POGLUT1Q8NBL1 392 aa11.38□□□□□ -0.59
TPM1-209ENST00000558072 OR4C3Q8NH37 302 aa11.38□□□□□ -0.59
TPM1-209ENST00000558072 HAS2Q92819 552 aa11.38□□□□□ -0.59
TPM1-209ENST00000558072 ARHGDIGQ99819 225 aa11.38□□□□□ -0.59
TPM1-209ENST00000558072 ZNF559Q9BR84 538 aa11.38□□□□□ -0.59
TPM1-209ENST00000558072 OSBPL11Q9BXB4 747 aa11.38□□□□□ -0.59
TPM1-209ENST00000558072 OSBPL10Q9BXB5 764 aa11.38□□□□□ -0.59
TPM1-209ENST00000558072 TRIM2Q9C040 744 aa11.38□□□□□ -0.59
TPM1-209ENST00000558072 LAT2Q9GZY6 243 aa11.38□□□□□ -0.59
TPM1-209ENST00000558072 PTGES2Q9H7Z7 377 aa11.38□□□□□ -0.59
TPM1-209ENST00000558072 TMEM27Q9HBJ8 222 aa11.38□□□□□ -0.59
TPM1-209ENST00000558072 SACM1LQ9NTJ5 587 aa11.38□□□□□ -0.59
TPM1-209ENST00000558072 FBXO34Q9NWN3 711 aa11.38□□□□□ -0.59
TPM1-209ENST00000558072 LRFN1Q9P244 771 aa11.38□□□□□ -0.59
TPM1-209ENST00000558072 PCDHGA9Q9Y5G4 932 aaKnown RBP11.38□□□□□ -0.59
TPM1-209ENST00000558072 KCNMB2Q9Y691 235 aa11.38□□□□□ -0.59
TPM1-209ENST00000558072 ASPMQ8IZT6 3477 aa11.37□□□□□ -0.59
TPM1-209ENST00000558072 OR5H15A6NDH6 313 aa11.37□□□□□ -0.59
TPM1-209ENST00000558072 MKRN2OSH3BPM6 223 aa11.37□□□□□ -0.59
TPM1-209ENST00000558072 FAAHO00519 579 aa11.37□□□□□ -0.59
TPM1-209ENST00000558072 CEACAM4O75871 244 aa11.37□□□□□ -0.59
TPM1-209ENST00000558072 OR6B1O95007 311 aa11.37□□□□□ -0.59
TPM1-209ENST00000558072 ZIC2O95409 532 aaPredicted RBP11.37□□□□□ -0.59
TPM1-209ENST00000558072 ANGPTL1O95841 491 aa11.37□□□□□ -0.59
TPM1-209ENST00000558072 LDLRP01130 860 aa11.37□□□□□ -0.59
TPM1-209ENST00000558072 ITGB2P05107 769 aa11.37□□□□□ -0.59
TPM1-209ENST00000558072 CD46P15529 392 aa11.37□□□□□ -0.59
TPM1-209ENST00000558072 PGCP20142 388 aa11.37□□□□□ -0.59
TPM1-209ENST00000558072 ELAVL4P26378 380 aaKnown RBP11.37□□□□□ -0.59
TPM1-209ENST00000558072 FOXK2Q01167 660 aa11.37□□□□□ -0.59
TPM1-209ENST00000558072 CBFBQ13951 182 aa11.37□□□□□ -0.59
TPM1-209ENST00000558072 NRF1Q16656 503 aa11.37□□□□□ -0.59
TPM1-209ENST00000558072 ENPP6Q6UWR7 440 aa11.37□□□□□ -0.59
TPM1-209ENST00000558072 ZNF836Q6ZNA1 936 aa11.37□□□□□ -0.59
TPM1-209ENST00000558072 BEST3Q8N1M1 668 aa11.37□□□□□ -0.59
TPM1-209ENST00000558072 LINC00471Q8N535 108 aa11.37□□□□□ -0.59
TPM1-209ENST00000558072 PIK3C3Q8NEB9 887 aa11.37□□□□□ -0.59
TPM1-209ENST00000558072 RNF138Q8WVD3 245 aa11.37□□□□□ -0.59
TPM1-209ENST00000558072 SNRNP27Q8WVK2 155 aaKnown RBP11.37□□□□□ -0.59
TPM1-209ENST00000558072 TMEM234Q8WY98 164 aa11.37□□□□□ -0.59
TPM1-209ENST00000558072 SDCCAG3Q96C92 435 aa11.37□□□□□ -0.59
TPM1-209ENST00000558072 C5orf34Q96MH7 638 aa11.37□□□□□ -0.59
TPM1-209ENST00000558072 CNTNAP3BQ96NU0 1288 aa11.37□□□□□ -0.59
TPM1-209ENST00000558072 ANGPTL4Q9BY76 406 aa11.37□□□□□ -0.59
TPM1-209ENST00000558072 CNTNAP3Q9BZ76 1288 aa11.37□□□□□ -0.59
TPM1-209ENST00000558072 VCX3BQ9H321 246 aa11.37□□□□□ -0.59
TPM1-209ENST00000558072 ANKRD19PQ9H560 264 aa11.37□□□□□ -0.59
TPM1-209ENST00000558072 C8orf4Q9NR00 106 aa11.37□□□□□ -0.59
TPM1-209ENST00000558072 STX18Q9P2W9 335 aaKnown RBP11.37□□□□□ -0.59
TPM1-209ENST00000558072 RPS6KB2Q9UBS0 482 aa11.37□□□□□ -0.59
TPM1-209ENST00000558072 DNAJB9Q9UBS3 223 aa11.37□□□□□ -0.59
TPM1-209ENST00000558072 KLF13Q9Y2Y9 288 aaPredicted RBP11.37□□□□□ -0.59
TPM1-209ENST00000558072 PCDHGB6Q9Y5F9 930 aa11.37□□□□□ -0.59
TPM1-209ENST00000558072 ENPP4Q9Y6X5 453 aa11.37□□□□□ -0.59
TPM1-209ENST00000558072 IGLV3-32A0A0A0MS00 114 aa11.36□□□□□ -0.59
TPM1-209ENST00000558072 HTR3EA5X5Y0 456 aa11.36□□□□□ -0.59
TPM1-209ENST00000558072 A6NL46 340 aa11.36□□□□□ -0.59
TPM1-209ENST00000558072 KLRC4-KLRK1H3BQV0 150 aa11.36□□□□□ -0.59
TPM1-209ENST00000558072 CST1P01037 141 aa11.36□□□□□ -0.59
TPM1-209ENST00000558072 SEMG1P04279 462 aa11.36□□□□□ -0.59
TPM1-209ENST00000558072 LINGO3P0C6S8 592 aa11.36□□□□□ -0.59
TPM1-209ENST00000558072 CNR1P21554 472 aa11.36□□□□□ -0.59
TPM1-209ENST00000558072 FKBP2P26885 142 aaKnown RBP11.36□□□□□ -0.59
TPM1-209ENST00000558072 CASP3P42574 277 aa11.36□□□□□ -0.59
TPM1-209ENST00000558072 HTR3AP46098 478 aa11.36□□□□□ -0.59
TPM1-209ENST00000558072 P2RX1P51575 399 aa11.36□□□□□ -0.59
TPM1-209ENST00000558072 MAP2K6P52564 334 aa11.36□□□□□ -0.59
TPM1-209ENST00000558072 CRYBA2P53672 197 aa11.36□□□□□ -0.59
TPM1-209ENST00000558072 ARG2P78540 354 aa11.36□□□□□ -0.59
TPM1-209ENST00000558072 ST3GAL3Q11203 375 aa11.36□□□□□ -0.59
TPM1-209ENST00000558072 GANABQ14697 944 aaKnown RBP11.36□□□□□ -0.59
TPM1-209ENST00000558072 MAPK14Q16539 360 aa11.36□□□□□ -0.59
TPM1-209ENST00000558072 SWT1Q5T5J6 900 aaKnown RBP11.36□□□□□ -0.59
TPM1-209ENST00000558072 B3GNTL1Q67FW5 361 aaPredicted RBP11.36□□□□□ -0.59
TPM1-209ENST00000558072 ZNF613Q6PF04 617 aa11.36□□□□□ -0.59
TPM1-209ENST00000558072 C19orf48Q6RUI8 117 aa11.36□□□□□ -0.59
TPM1-209ENST00000558072 IGFL2Q6UWQ7 119 aa11.36□□□□□ -0.59
TPM1-209ENST00000558072 OLIG3Q7RTU3 272 aa11.36□□□□□ -0.59
TPM1-209ENST00000558072 VTCN1Q7Z7D3 282 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms