RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 FBXO7Q9Y3I1 522 aa3.75□□□□□ -1.81
PRPF39-212ENST00000557477 ZNF175Q9Y473 711 aa3.75□□□□□ -1.81
PRPF39-212ENST00000557477 PTPRFP10586 1907 aa3.75□□□□□ -1.81
PRPF39-212ENST00000557477 M0QX08 132 aa3.74□□□□□ -1.81
PRPF39-212ENST00000557477 NDUFAB1O14561 156 aa3.74□□□□□ -1.81
PRPF39-212ENST00000557477 STAMBPO95630 424 aa3.74□□□□□ -1.81
PRPF39-212ENST00000557477 IGHG3P01860 377 aa3.74□□□□□ -1.81
PRPF39-212ENST00000557477 CD9P21926 228 aa3.74□□□□□ -1.81
PRPF39-212ENST00000557477 PRDX2P32119 198 aa3.74□□□□□ -1.81
PRPF39-212ENST00000557477 SLC6A8P48029 635 aa3.74□□□□□ -1.81
PRPF39-212ENST00000557477 GSK3BP49841 420 aa3.74□□□□□ -1.81
PRPF39-212ENST00000557477 POLR2FP61218 127 aaKnown RBP3.74□□□□□ -1.81
PRPF39-212ENST00000557477 PAX8Q06710 450 aa3.74□□□□□ -1.81
PRPF39-212ENST00000557477 NME3Q13232 169 aa3.74□□□□□ -1.81
PRPF39-212ENST00000557477 DYNC1I2Q13409 638 aaKnown RBP3.74□□□□□ -1.81
PRPF39-212ENST00000557477 SMC1AQ14683 1233 aaKnown RBP3.74□□□□□ -1.81
PRPF39-212ENST00000557477 EMC2Q15006 297 aa3.74□□□□□ -1.81
PRPF39-212ENST00000557477 KLHL40Q2TBA0 621 aa3.74□□□□□ -1.81
PRPF39-212ENST00000557477 USH1GQ495M9 461 aa3.74□□□□□ -1.81
PRPF39-212ENST00000557477 IL23RQ5VWK5 629 aa3.74□□□□□ -1.81
PRPF39-212ENST00000557477 ZNF343Q6P1L6 599 aa3.74□□□□□ -1.81
PRPF39-212ENST00000557477 GSG1LQ6UXU4 331 aa3.74□□□□□ -1.81
PRPF39-212ENST00000557477 ZNF440Q8IYI8 595 aa3.74□□□□□ -1.81
PRPF39-212ENST00000557477 LRRC43Q8N309 656 aa3.74□□□□□ -1.81
PRPF39-212ENST00000557477 LINC00469Q8N7U9 141 aa3.74□□□□□ -1.81
PRPF39-212ENST00000557477 MLKLQ8NB16 471 aa3.74□□□□□ -1.81
PRPF39-212ENST00000557477 MINDY2Q8NBR6 621 aa3.74□□□□□ -1.81
PRPF39-212ENST00000557477 TRPV1Q8NER1 839 aa3.74□□□□□ -1.81
PRPF39-212ENST00000557477 BRSK1Q8TDC3 778 aa3.74□□□□□ -1.81
PRPF39-212ENST00000557477 ARNTL2Q8WYA1 636 aa3.74□□□□□ -1.81
PRPF39-212ENST00000557477 ATF6BQ99941 703 aa3.74□□□□□ -1.81
PRPF39-212ENST00000557477 CHCHD5Q9BSY4 110 aa3.74□□□□□ -1.81
PRPF39-212ENST00000557477 RAB17Q9H0T7 212 aa3.74□□□□□ -1.81
PRPF39-212ENST00000557477 ATG10Q9H0Y0 220 aa3.74□□□□□ -1.81
PRPF39-212ENST00000557477 TUBB1Q9H4B7 451 aa3.74□□□□□ -1.81
PRPF39-212ENST00000557477 Q9HAA7 133 aa3.74□□□□□ -1.81
PRPF39-212ENST00000557477 AUP1Q9Y679 476 aa3.74□□□□□ -1.81
PRPF39-212ENST00000557477 PLXNB2O15031 1838 aa3.74□□□□□ -1.81
PRPF39-212ENST00000557477 VCANP13611 3396 aa3.74□□□□□ -1.81
PRPF39-212ENST00000557477 EYSQ5T1H1 3165 aa3.73□□□□□ -1.81
PRPF39-212ENST00000557477 CCDC171Q6TFL3 1326 aa3.73□□□□□ -1.81
PRPF39-212ENST00000557477 IGKV3D-15A0A087WSY6 115 aa3.73□□□□□ -1.81
PRPF39-212ENST00000557477 TEX48A0A1B0GUV7 120 aa3.73□□□□□ -1.81
PRPF39-212ENST00000557477 ERICH2A1L162 156 aa3.73□□□□□ -1.81
PRPF39-212ENST00000557477 LIN7AO14910 233 aaPredicted RBP3.73□□□□□ -1.81
PRPF39-212ENST00000557477 TXNL1O43396 289 aa3.73□□□□□ -1.81
PRPF39-212ENST00000557477 PI15O43692 258 aa3.73□□□□□ -1.81
PRPF39-212ENST00000557477 NEMFO60524 1076 aa3.73□□□□□ -1.81
PRPF39-212ENST00000557477 CNMDO75829 334 aa3.73□□□□□ -1.81
PRPF39-212ENST00000557477 HPRP00739 348 aa3.73□□□□□ -1.81
PRPF39-212ENST00000557477 OAS1P00973 400 aaKnown RBP3.73□□□□□ -1.81
PRPF39-212ENST00000557477 TIMP1P01033 207 aa3.73□□□□□ -1.81
PRPF39-212ENST00000557477 HCKP08631 526 aa3.73□□□□□ -1.81
PRPF39-212ENST00000557477 SLC1A4P43007 532 aa3.73□□□□□ -1.81
PRPF39-212ENST00000557477 MAGEA4P43358 317 aa3.73□□□□□ -1.81
PRPF39-212ENST00000557477 FNTAP49354 379 aa3.73□□□□□ -1.81
PRPF39-212ENST00000557477 ACLYP53396 1101 aa3.73□□□□□ -1.81
PRPF39-212ENST00000557477 CCL23P55773 120 aa3.73□□□□□ -1.81
PRPF39-212ENST00000557477 DYNLL1P63167 89 aaKnown RBP3.73□□□□□ -1.81
PRPF39-212ENST00000557477 BASP1P80723 227 aaKnown RBP3.73□□□□□ -1.81
PRPF39-212ENST00000557477 HAGHQ16775 308 aa3.73□□□□□ -1.81
PRPF39-212ENST00000557477 ZNF699Q32M78 642 aa3.73□□□□□ -1.81
PRPF39-212ENST00000557477 CCDC14Q49A88 953 aa3.73□□□□□ -1.81
PRPF39-212ENST00000557477 C12orf60Q5U649 245 aa3.73□□□□□ -1.81
PRPF39-212ENST00000557477 RAET1GQ6H3X3 334 aa3.73□□□□□ -1.81
PRPF39-212ENST00000557477 FAAP20Q6NZ36 180 aa3.73□□□□□ -1.81
PRPF39-212ENST00000557477 PAQR6Q6TCH4 344 aa3.73□□□□□ -1.81
PRPF39-212ENST00000557477 CWC27Q6UX04 472 aaKnown RBP3.73□□□□□ -1.81
PRPF39-212ENST00000557477 UNC5DQ6UXZ4 953 aa3.73□□□□□ -1.81
PRPF39-212ENST00000557477 DPY19L2P2Q6ZN68 376 aa3.73□□□□□ -1.81
PRPF39-212ENST00000557477 GPRIN3Q6ZVF9 776 aa3.73□□□□□ -1.81
PRPF39-212ENST00000557477 NCCRP1Q6ZVX7 275 aaPredicted RBP3.73□□□□□ -1.81
PRPF39-212ENST00000557477 DEFB128Q7Z7B8 93 aa3.73□□□□□ -1.81
PRPF39-212ENST00000557477 CATSPER3Q86XQ3 398 aa3.73□□□□□ -1.81
PRPF39-212ENST00000557477 CCDC50Q8IVM0 306 aa3.73□□□□□ -1.81
PRPF39-212ENST00000557477 ABHD12Q8N2K0 398 aa3.73□□□□□ -1.81
PRPF39-212ENST00000557477 RNF10Q8N5U6 811 aaKnown RBP3.73□□□□□ -1.81
PRPF39-212ENST00000557477 SAMD12Q8N8I0 201 aa3.73□□□□□ -1.81
PRPF39-212ENST00000557477 ZNF491Q8N8L2 437 aa3.73□□□□□ -1.81
PRPF39-212ENST00000557477 CCDC112Q8NEF3 446 aa3.73□□□□□ -1.81
PRPF39-212ENST00000557477 SPATA3Q8NHX4 192 aa3.73□□□□□ -1.81
PRPF39-212ENST00000557477 ACER1Q8TDN7 264 aa3.73□□□□□ -1.81
PRPF39-212ENST00000557477 RAB3CQ96E17 227 aa3.73□□□□□ -1.81
PRPF39-212ENST00000557477 C14orf79Q96F83 325 aa3.73□□□□□ -1.81
PRPF39-212ENST00000557477 UQCC2Q9BRT2 126 aa3.73□□□□□ -1.81
PRPF39-212ENST00000557477 CRNKL1Q9BZJ0 848 aaKnown RBP3.73□□□□□ -1.81
PRPF39-212ENST00000557477 API5Q9BZZ5 524 aaKnown RBP3.73□□□□□ -1.81
PRPF39-212ENST00000557477 TRIM15Q9C019 465 aa3.73□□□□□ -1.81
PRPF39-212ENST00000557477 FAM124BQ9H5Z6 455 aaPredicted RBP3.73□□□□□ -1.81
PRPF39-212ENST00000557477 JPT2Q9H910 190 aa3.73□□□□□ -1.81
PRPF39-212ENST00000557477 ROPN1Q9HAT0 212 aaPredicted RBP3.73□□□□□ -1.81
PRPF39-212ENST00000557477 IL1RL2Q9HB29 575 aa3.73□□□□□ -1.81
PRPF39-212ENST00000557477 NRN1Q9NPD7 142 aa3.73□□□□□ -1.81
PRPF39-212ENST00000557477 STARD5Q9NSY2 213 aa3.73□□□□□ -1.81
PRPF39-212ENST00000557477 RARRES3Q9UL19 164 aa3.73□□□□□ -1.81
PRPF39-212ENST00000557477 MGAT4AQ9UM21 535 aa3.73□□□□□ -1.81
PRPF39-212ENST00000557477 SPATA2Q9UM82 520 aa3.73□□□□□ -1.81
PRPF39-212ENST00000557477 MTF2Q9Y483 593 aaPredicted RBP3.73□□□□□ -1.81
PRPF39-212ENST00000557477 A0A0A6YYD4 124 aa3.72□□□□□ -1.81
PRPF39-212ENST00000557477 RGSL1A5PLK6 1076 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms