RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 ATAD3AQ9NVI7 634 aa12.73□□□□□ -0.37
SNX6-210ENST00000557341 BEX4Q9NWD9 120 aaPredicted RBP12.73□□□□□ -0.37
SNX6-210ENST00000557341 C6orf203Q9P0P8 240 aaPredicted RBP12.73□□□□□ -0.37
SNX6-210ENST00000557341 GIMAP2Q9UG22 337 aa12.73□□□□□ -0.37
SNX6-210ENST00000557341 EMC9Q9Y3B6 208 aa12.73□□□□□ -0.37
SNX6-210ENST00000557341 SNX8Q9Y5X2 465 aa12.73□□□□□ -0.37
SNX6-210ENST00000557341 NSD1Q96L73 2696 aaPredicted RBP12.73□□□□□ -0.37
SNX6-210ENST00000557341 A0A1W2PRB8 838 aa12.72□□□□□ -0.37
SNX6-210ENST00000557341 C16orf97H3BN30 126 aa12.72□□□□□ -0.37
SNX6-210ENST00000557341 PEX11AO75192 247 aa12.72□□□□□ -0.37
SNX6-210ENST00000557341 SKAP2O75563 359 aaPredicted RBP12.72□□□□□ -0.37
SNX6-210ENST00000557341 AQP8O94778 261 aa12.72□□□□□ -0.37
SNX6-210ENST00000557341 PLGP00747 810 aaPredicted RBP12.72□□□□□ -0.37
SNX6-210ENST00000557341 CGAP01215 116 aa12.72□□□□□ -0.37
SNX6-210ENST00000557341 HMGN2P05204 90 aaKnown RBP12.72□□□□□ -0.37
SNX6-210ENST00000557341 CD53P19397 219 aa12.72□□□□□ -0.37
SNX6-210ENST00000557341 CRYGSP22914 178 aa12.72□□□□□ -0.37
SNX6-210ENST00000557341 ME2P23368 584 aa12.72□□□□□ -0.37
SNX6-210ENST00000557341 VSNL1P62760 191 aa12.72□□□□□ -0.37
SNX6-210ENST00000557341 PTGR1Q14914 329 aa12.72□□□□□ -0.37
SNX6-210ENST00000557341 EXOSC6Q5RKV6 272 aaKnown RBP12.72□□□□□ -0.37
SNX6-210ENST00000557341 NATD1Q8N6N6 113 aa12.72□□□□□ -0.37
SNX6-210ENST00000557341 FNDC5Q8NAU1 212 aa12.72□□□□□ -0.37
SNX6-210ENST00000557341 OR7A2PQ8NGA2 310 aa12.72□□□□□ -0.37
SNX6-210ENST00000557341 OR6K3Q8NGY3 331 aa12.72□□□□□ -0.37
SNX6-210ENST00000557341 OR10D3Q8NH80 312 aa12.72□□□□□ -0.37
SNX6-210ENST00000557341 CDS1Q92903 461 aa12.72□□□□□ -0.37
SNX6-210ENST00000557341 C16orf58Q96GQ5 468 aa12.72□□□□□ -0.37
SNX6-210ENST00000557341 SH3YL1Q96HL8 342 aaPredicted RBP12.72□□□□□ -0.37
SNX6-210ENST00000557341 RNF145Q96MT1 663 aa12.72□□□□□ -0.37
SNX6-210ENST00000557341 WFIKKN1Q96NZ8 548 aa12.72□□□□□ -0.37
SNX6-210ENST00000557341 C1orf50Q9BV19 199 aa12.72□□□□□ -0.37
SNX6-210ENST00000557341 BTBD2Q9BX70 525 aa12.72□□□□□ -0.37
SNX6-210ENST00000557341 NEUROD4Q9HD90 331 aa12.72□□□□□ -0.37
SNX6-210ENST00000557341 DLL4Q9NR61 685 aa12.72□□□□□ -0.37
SNX6-210ENST00000557341 MED17Q9NVC6 651 aa12.72□□□□□ -0.37
SNX6-210ENST00000557341 MCTS1Q9ULC4 181 aaKnown RBP12.72□□□□□ -0.37
SNX6-210ENST00000557341 ARID1AO14497 2285 aa12.72□□□□□ -0.37
SNX6-210ENST00000557341 FREM1Q5H8C1 2179 aa12.71□□□□□ -0.37
SNX6-210ENST00000557341 SS18L1O75177 396 aaPredicted RBP12.71□□□□□ -0.37
SNX6-210ENST00000557341 LYPLA1O75608 230 aaPredicted RBP12.71□□□□□ -0.37
SNX6-210ENST00000557341 KRT16P08779 473 aa12.71□□□□□ -0.37
SNX6-210ENST00000557341 FOSL1P15407 271 aa12.71□□□□□ -0.37
SNX6-210ENST00000557341 ATP6V1C1P21283 382 aa12.71□□□□□ -0.37
SNX6-210ENST00000557341 CTBP2P56545 445 aa12.71□□□□□ -0.37
SNX6-210ENST00000557341 RAC1P63000 192 aa12.71□□□□□ -0.37
SNX6-210ENST00000557341 TP53BP2Q13625 1128 aa12.71□□□□□ -0.37
SNX6-210ENST00000557341 CD226Q15762 336 aa12.71□□□□□ -0.37
SNX6-210ENST00000557341 CTU2Q2VPK5 515 aaKnown RBP12.71□□□□□ -0.37
SNX6-210ENST00000557341 CPTPQ5TA50 214 aa12.71□□□□□ -0.37
SNX6-210ENST00000557341 CDC73Q6P1J9 531 aa12.71□□□□□ -0.37
SNX6-210ENST00000557341 ESPNLQ6ZVH7 1005 aa12.71□□□□□ -0.37
SNX6-210ENST00000557341 ZNF550Q7Z398 422 aa12.71□□□□□ -0.37
SNX6-210ENST00000557341 ZNF610Q8N9Z0 462 aa12.71□□□□□ -0.37
SNX6-210ENST00000557341 ZNF527Q8NB42 609 aa12.71□□□□□ -0.37
SNX6-210ENST00000557341 OR56A1Q8NGH5 318 aa12.71□□□□□ -0.37
SNX6-210ENST00000557341 B4GALNT2Q8NHY0 566 aa12.71□□□□□ -0.37
SNX6-210ENST00000557341 OR5P2Q8WZ92 322 aa12.71□□□□□ -0.37
SNX6-210ENST00000557341 CAVIN3Q969G5 261 aa12.71□□□□□ -0.37
SNX6-210ENST00000557341 PIK3IP1Q96FE7 263 aa12.71□□□□□ -0.37
SNX6-210ENST00000557341 GMPPAQ96IJ6 420 aaPredicted RBP12.71□□□□□ -0.37
SNX6-210ENST00000557341 ADGRG7Q96K78 797 aa12.71□□□□□ -0.37
SNX6-210ENST00000557341 NPAS1Q99742 590 aa12.71□□□□□ -0.37
SNX6-210ENST00000557341 ACTRT3Q9BYD9 372 aa12.71□□□□□ -0.37
SNX6-210ENST00000557341 ROPN1BQ9BZX4 212 aaPredicted RBP12.71□□□□□ -0.37
SNX6-210ENST00000557341 PIGUQ9H490 435 aa12.71□□□□□ -0.37
SNX6-210ENST00000557341 ROPN1Q9HAT0 212 aaPredicted RBP12.71□□□□□ -0.37
SNX6-210ENST00000557341 FBXO34Q9NWN3 711 aa12.71□□□□□ -0.37
SNX6-210ENST00000557341 GIN1Q9NXP7 522 aa12.71□□□□□ -0.37
SNX6-210ENST00000557341 DEFB108AA8MXU0 73 aa12.7□□□□□ -0.38
SNX6-210ENST00000557341 TNFSF11O14788 317 aa12.7□□□□□ -0.38
SNX6-210ENST00000557341 SIAH2O43255 324 aa12.7□□□□□ -0.38
SNX6-210ENST00000557341 SLU7O95391 586 aaKnown RBP12.7□□□□□ -0.38
SNX6-210ENST00000557341 SYNGR4O95473 234 aa12.7□□□□□ -0.38
SNX6-210ENST00000557341 LAMP1P11279 417 aa12.7□□□□□ -0.38
SNX6-210ENST00000557341 PSMA4P25789 261 aaKnown RBP12.7□□□□□ -0.38
SNX6-210ENST00000557341 ELK4P28324 431 aa12.7□□□□□ -0.38
SNX6-210ENST00000557341 HOXC12P31275 282 aa12.7□□□□□ -0.38
SNX6-210ENST00000557341 ARRB2P32121 409 aa12.7□□□□□ -0.38
SNX6-210ENST00000557341 EIF1P41567 113 aaKnown RBP12.7□□□□□ -0.38
SNX6-210ENST00000557341 SLC6A8P48029 635 aa12.7□□□□□ -0.38
SNX6-210ENST00000557341 CCT3P49368 545 aaKnown RBP12.7□□□□□ -0.38
SNX6-210ENST00000557341 EXOC3L2Q2M3D2 409 aa12.7□□□□□ -0.38
SNX6-210ENST00000557341 LSM12Q3MHD2 195 aaKnown RBP12.7□□□□□ -0.38
SNX6-210ENST00000557341 SPDYE7PQ495Y7 208 aa12.7□□□□□ -0.38
SNX6-210ENST00000557341 C6orf136Q5SQH8 315 aa12.7□□□□□ -0.38
SNX6-210ENST00000557341 PDSS1Q5T2R2 415 aa12.7□□□□□ -0.38
SNX6-210ENST00000557341 EMBQ6PCB8 327 aa12.7□□□□□ -0.38
SNX6-210ENST00000557341 MTERF4Q7Z6M4 381 aaKnown RBP12.7□□□□□ -0.38
SNX6-210ENST00000557341 WFDC11Q8NEX6 87 aa12.7□□□□□ -0.38
SNX6-210ENST00000557341 OR2V1Q8NHB1 315 aa12.7□□□□□ -0.38
SNX6-210ENST00000557341 PSMA8Q8TAA3 256 aa12.7□□□□□ -0.38
SNX6-210ENST00000557341 PHOSPHO1Q8TCT1 267 aa12.7□□□□□ -0.38
SNX6-210ENST00000557341 SFXN5Q8TD22 340 aa12.7□□□□□ -0.38
SNX6-210ENST00000557341 ADAMTS15Q8TE58 950 aa12.7□□□□□ -0.38
SNX6-210ENST00000557341 MOAP1Q96BY2 351 aa12.7□□□□□ -0.38
SNX6-210ENST00000557341 TUBGCP3Q96CW5 907 aa12.7□□□□□ -0.38
SNX6-210ENST00000557341 C3orf30Q96M34 536 aa12.7□□□□□ -0.38
SNX6-210ENST00000557341 PRPF18Q99633 342 aaKnown RBP12.7□□□□□ -0.38
SNX6-210ENST00000557341 TMEM185BQ9H7F4 350 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms