RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 SLA2Q9H6Q3 261 aa3.32□□□□□ -1.88
CHD8-212ENST00000557329 ACKR4Q9NPB9 350 aa3.32□□□□□ -1.88
CHD8-212ENST00000557329 ATXN10Q9UBB4 475 aa3.32□□□□□ -1.88
CHD8-212ENST00000557329 SLC23A2Q9UGH3 650 aa3.32□□□□□ -1.88
CHD8-212ENST00000557329 ARMCX3Q9UH62 379 aaPredicted RBP3.32□□□□□ -1.88
CHD8-212ENST00000557329 GRID1Q9ULK0 1009 aa3.32□□□□□ -1.88
CHD8-212ENST00000557329 TRAF3IP3Q9Y228 551 aa3.32□□□□□ -1.88
CHD8-212ENST00000557329 RNF6Q9Y252 685 aa3.32□□□□□ -1.88
CHD8-212ENST00000557329 MMP24Q9Y5R2 645 aa3.32□□□□□ -1.88
CHD8-212ENST00000557329 COL6A5A8TX70 2615 aa3.32□□□□□ -1.88
CHD8-212ENST00000557329 AKAP6Q13023 2319 aa3.31□□□□□ -1.88
CHD8-212ENST00000557329 IGHV4-4A0A075B6R2 117 aa3.31□□□□□ -1.88
CHD8-212ENST00000557329 NSG1A0A0A6YYJ2 146 aa3.31□□□□□ -1.88
CHD8-212ENST00000557329 IGLV9-49A0A0B4J1Y8 123 aa3.31□□□□□ -1.88
CHD8-212ENST00000557329 TSPAN11A1L157 253 aa3.31□□□□□ -1.88
CHD8-212ENST00000557329 NDUFAF8A1L188 74 aa3.31□□□□□ -1.88
CHD8-212ENST00000557329 OR2A25A4D2G3 310 aa3.31□□□□□ -1.88
CHD8-212ENST00000557329 ARHGAP42A6NI28 874 aa3.31□□□□□ -1.88
CHD8-212ENST00000557329 E9PI62 339 aa3.31□□□□□ -1.88
CHD8-212ENST00000557329 CTDSP2O14595 271 aa3.31□□□□□ -1.88
CHD8-212ENST00000557329 KMOO15229 486 aa3.31□□□□□ -1.88
CHD8-212ENST00000557329 SMPD2O60906 423 aa3.31□□□□□ -1.88
CHD8-212ENST00000557329 DNAJB6O75190 326 aa3.31□□□□□ -1.88
CHD8-212ENST00000557329 CDK14O94921 469 aa3.31□□□□□ -1.88
CHD8-212ENST00000557329 ZNF30P17039 623 aa3.31□□□□□ -1.88
CHD8-212ENST00000557329 ZNF7P17097 686 aaPredicted RBP3.31□□□□□ -1.88
CHD8-212ENST00000557329 HLA-DPA1P20036 260 aa3.31□□□□□ -1.88
CHD8-212ENST00000557329 LHCGRP22888 699 aa3.31□□□□□ -1.88
CHD8-212ENST00000557329 IL4RP24394 825 aa3.31□□□□□ -1.88
CHD8-212ENST00000557329 CXCR2P25025 360 aa3.31□□□□□ -1.88
CHD8-212ENST00000557329 EEF1DP29692 281 aaKnown RBP3.31□□□□□ -1.88
CHD8-212ENST00000557329 RORAP35398 523 aa3.31□□□□□ -1.88
CHD8-212ENST00000557329 NSG1P42857 185 aa3.31□□□□□ -1.88
CHD8-212ENST00000557329 RAB28P51157 221 aa3.31□□□□□ -1.88
CHD8-212ENST00000557329 KPNA2P52292 529 aaKnown RBP3.31□□□□□ -1.88
CHD8-212ENST00000557329 CDH11P55287 796 aa3.31□□□□□ -1.88
CHD8-212ENST00000557329 YBEYP58557 167 aaPredicted RBP3.31□□□□□ -1.88
CHD8-212ENST00000557329 MAXP61244 160 aa3.31□□□□□ -1.88
CHD8-212ENST00000557329 IRX1P78414 480 aaPredicted RBP3.31□□□□□ -1.88
CHD8-212ENST00000557329 CX3CL1P78423 397 aa3.31□□□□□ -1.88
CHD8-212ENST00000557329 IRF3Q14653 427 aa3.31□□□□□ -1.88
CHD8-212ENST00000557329 PARP15Q460N3 678 aa3.31□□□□□ -1.88
CHD8-212ENST00000557329 NKAIN1Q4KMZ8 207 aa3.31□□□□□ -1.88
CHD8-212ENST00000557329 GRTP1Q5TC63 336 aa3.31□□□□□ -1.88
CHD8-212ENST00000557329 TAF3Q5VWG9 929 aa3.31□□□□□ -1.88
CHD8-212ENST00000557329 ITPRIPL1Q6GPH6 555 aa3.31□□□□□ -1.88
CHD8-212ENST00000557329 BHLHB9Q6PI77 547 aa3.31□□□□□ -1.88
CHD8-212ENST00000557329 SLFN11Q7Z7L1 901 aa3.31□□□□□ -1.88
CHD8-212ENST00000557329 NLRP14Q86W24 1093 aa3.31□□□□□ -1.88
CHD8-212ENST00000557329 PAQR7Q86WK9 346 aa3.31□□□□□ -1.88
CHD8-212ENST00000557329 COMMD2Q86X83 199 aa3.31□□□□□ -1.88
CHD8-212ENST00000557329 BBS5Q8N3I7 341 aa3.31□□□□□ -1.88
CHD8-212ENST00000557329 CCDC185Q8N715 623 aa3.31□□□□□ -1.88
CHD8-212ENST00000557329 RTL3Q8N8U3 475 aaKnown RBP3.31□□□□□ -1.88
CHD8-212ENST00000557329 MAPK1IP1LQ8NDC0 245 aa3.31□□□□□ -1.88
CHD8-212ENST00000557329 OR1J1Q8NGS3 322 aa3.31□□□□□ -1.88
CHD8-212ENST00000557329 LILRB4Q8NHJ6 448 aa3.31□□□□□ -1.88
CHD8-212ENST00000557329 RNF128Q8TEB7 428 aa3.31□□□□□ -1.88
CHD8-212ENST00000557329 RSRC1Q96IZ7 334 aaKnown RBP3.31□□□□□ -1.88
CHD8-212ENST00000557329 ART5Q96L15 291 aa3.31□□□□□ -1.88
CHD8-212ENST00000557329 C12orf66Q96MD2 445 aa3.31□□□□□ -1.88
CHD8-212ENST00000557329 NSMCE3Q96MG7 304 aa3.31□□□□□ -1.88
CHD8-212ENST00000557329 GPR137Q96N19 417 aa3.31□□□□□ -1.88
CHD8-212ENST00000557329 ZNF582Q96NG8 517 aaPredicted RBP3.31□□□□□ -1.88
CHD8-212ENST00000557329 SRSF8Q9BRL6 282 aaKnown RBP3.31□□□□□ -1.88
CHD8-212ENST00000557329 SLC39A8Q9C0K1 460 aa3.31□□□□□ -1.88
CHD8-212ENST00000557329 VN1R1Q9GZP7 353 aa3.31□□□□□ -1.88
CHD8-212ENST00000557329 ATG10Q9H0Y0 220 aa3.31□□□□□ -1.88
CHD8-212ENST00000557329 SRMSQ9H3Y6 488 aa3.31□□□□□ -1.88
CHD8-212ENST00000557329 UCK1Q9HA47 277 aa3.31□□□□□ -1.88
CHD8-212ENST00000557329 MAGEF1Q9HAY2 307 aa3.31□□□□□ -1.88
CHD8-212ENST00000557329 YAE1D1Q9NRH1 226 aa3.31□□□□□ -1.88
CHD8-212ENST00000557329 FAM207AQ9NSI2 230 aaPredicted RBP3.31□□□□□ -1.88
CHD8-212ENST00000557329 ATAD3AQ9NVI7 634 aa3.31□□□□□ -1.88
CHD8-212ENST00000557329 EPHA6Q9UF33 1036 aa3.31□□□□□ -1.88
CHD8-212ENST00000557329 PLAGL1Q9UM63 463 aa3.31□□□□□ -1.88
CHD8-212ENST00000557329 WDR37Q9Y2I8 494 aa3.31□□□□□ -1.88
CHD8-212ENST00000557329 FBN1P35555 2871 aaKnown RBP3.31□□□□□ -1.88
CHD8-212ENST00000557329 CACNA1CQ13936 2221 aa3.31□□□□□ -1.88
CHD8-212ENST00000557329 INTS1Q8N201 2190 aaKnown RBP3.31□□□□□ -1.88
CHD8-212ENST00000557329 C1orf232A0A0U1RR37 186 aa3.3□□□□□ -1.88
CHD8-212ENST00000557329 A0A1B0GTH9 108 aa3.3□□□□□ -1.88
CHD8-212ENST00000557329 PRSS51A0A1B0GVH4 220 aa3.3□□□□□ -1.88
CHD8-212ENST00000557329 A0A1W2PQ67 120 aa3.3□□□□□ -1.88
CHD8-212ENST00000557329 OR5H15A6NDH6 313 aa3.3□□□□□ -1.88
CHD8-212ENST00000557329 AGAP14A8MT82 685 aa3.3□□□□□ -1.88
CHD8-212ENST00000557329 PSMD11O00231 422 aa3.3□□□□□ -1.88
CHD8-212ENST00000557329 PLOD2O00469 737 aa3.3□□□□□ -1.88
CHD8-212ENST00000557329 TFECO14948 347 aaPredicted RBP3.3□□□□□ -1.88
CHD8-212ENST00000557329 SLC22A2O15244 555 aa3.3□□□□□ -1.88
CHD8-212ENST00000557329 KLRC4O43908 158 aa3.3□□□□□ -1.88
CHD8-212ENST00000557329 POP7O75817 140 aaKnown RBP3.3□□□□□ -1.88
CHD8-212ENST00000557329 TOXO94900 526 aa3.3□□□□□ -1.88
CHD8-212ENST00000557329 SOD1P00441 154 aa3.3□□□□□ -1.88
CHD8-212ENST00000557329 SPTBP11277 2137 aa3.3□□□□□ -1.88
CHD8-212ENST00000557329 MMP11P24347 488 aa3.3□□□□□ -1.88
CHD8-212ENST00000557329 SDC4P31431 198 aa3.3□□□□□ -1.88
CHD8-212ENST00000557329 RFC3P40938 356 aa3.3□□□□□ -1.88
CHD8-212ENST00000557329 OR1D4P47884 311 aa3.3□□□□□ -1.88
CHD8-212ENST00000557329 RPL34P49207 117 aaKnown RBP3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms