RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 ZNF41P51814 821 aaPredicted RBP14.24□□□□□ -0.13
TUBB3-213ENST00000557262 CTBP2P56545 445 aa14.24□□□□□ -0.13
TUBB3-213ENST00000557262 LTBQ06643 244 aa14.24□□□□□ -0.13
TUBB3-213ENST00000557262 EXOC3L2Q2M3D2 409 aa14.24□□□□□ -0.13
TUBB3-213ENST00000557262 CTU2Q2VPK5 515 aaKnown RBP14.24□□□□□ -0.13
TUBB3-213ENST00000557262 EXOSC6Q5RKV6 272 aaKnown RBP14.24□□□□□ -0.13
TUBB3-213ENST00000557262 PDSS1Q5T2R2 415 aa14.24□□□□□ -0.13
TUBB3-213ENST00000557262 ZAR1Q86SH2 424 aa14.24□□□□□ -0.13
TUBB3-213ENST00000557262 DDIASQ8IXT1 998 aa14.24□□□□□ -0.13
TUBB3-213ENST00000557262 COX18Q8N8Q8 333 aa14.24□□□□□ -0.13
TUBB3-213ENST00000557262 LRRN4CLQ8ND94 238 aa14.24□□□□□ -0.13
TUBB3-213ENST00000557262 FBXO30Q8TB52 745 aa14.24□□□□□ -0.13
TUBB3-213ENST00000557262 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.24□□□□□ -0.13
TUBB3-213ENST00000557262 CAVIN3Q969G5 261 aa14.24□□□□□ -0.13
TUBB3-213ENST00000557262 ADGRG7Q96K78 797 aa14.24□□□□□ -0.13
TUBB3-213ENST00000557262 NPAS1Q99742 590 aa14.24□□□□□ -0.13
TUBB3-213ENST00000557262 SMR3AQ99954 134 aa14.24□□□□□ -0.13
TUBB3-213ENST00000557262 BTBD2Q9BX70 525 aa14.24□□□□□ -0.13
TUBB3-213ENST00000557262 UBTD1Q9HAC8 227 aa14.24□□□□□ -0.13
TUBB3-213ENST00000557262 EML4Q9HC35 981 aaKnown RBP14.24□□□□□ -0.13
TUBB3-213ENST00000557262 FANCFQ9NPI8 374 aa14.24□□□□□ -0.13
TUBB3-213ENST00000557262 GLRX2Q9NS18 164 aa14.24□□□□□ -0.13
TUBB3-213ENST00000557262 MED17Q9NVC6 651 aa14.24□□□□□ -0.13
TUBB3-213ENST00000557262 ATP6V1HQ9UI12 483 aa14.24□□□□□ -0.13
TUBB3-213ENST00000557262 MCTS1Q9ULC4 181 aaKnown RBP14.24□□□□□ -0.13
TUBB3-213ENST00000557262 TLDC2A0PJX2 215 aa14.23□□□□□ -0.13
TUBB3-213ENST00000557262 TMEM114B3SHH9 223 aa14.23□□□□□ -0.13
TUBB3-213ENST00000557262 CXCL13O43927 109 aa14.23□□□□□ -0.13
TUBB3-213ENST00000557262 NPHS1O60500 1241 aa14.23□□□□□ -0.13
TUBB3-213ENST00000557262 SS18L1O75177 396 aaPredicted RBP14.23□□□□□ -0.13
TUBB3-213ENST00000557262 PPP3CBP16298 524 aa14.23□□□□□ -0.13
TUBB3-213ENST00000557262 EFNA1P20827 205 aaPredicted RBP14.23□□□□□ -0.13
TUBB3-213ENST00000557262 LOXP28300 417 aaPredicted RBP14.23□□□□□ -0.13
TUBB3-213ENST00000557262 ALDH3A1P30838 453 aa14.23□□□□□ -0.13
TUBB3-213ENST00000557262 RPL3P39023 403 aaKnown RBP14.23□□□□□ -0.13
TUBB3-213ENST00000557262 POU6F2P78424 691 aaPredicted RBP14.23□□□□□ -0.13
TUBB3-213ENST00000557262 PLPPR5Q32ZL2 321 aa14.23□□□□□ -0.13
TUBB3-213ENST00000557262 ARL13AQ5H913 290 aaPredicted RBP14.23□□□□□ -0.13
TUBB3-213ENST00000557262 GTF2IRD2BQ6EKJ0 949 aa14.23□□□□□ -0.13
TUBB3-213ENST00000557262 ESPNLQ6ZVH7 1005 aa14.23□□□□□ -0.13
TUBB3-213ENST00000557262 GTF2IRD2Q86UP8 949 aa14.23□□□□□ -0.13
TUBB3-213ENST00000557262 BANPQ8N9N5 519 aa14.23□□□□□ -0.13
TUBB3-213ENST00000557262 OR2V1Q8NHB1 315 aa14.23□□□□□ -0.13
TUBB3-213ENST00000557262 B4GALNT2Q8NHY0 566 aa14.23□□□□□ -0.13
TUBB3-213ENST00000557262 TWIST2Q8WVJ9 160 aa14.23□□□□□ -0.13
TUBB3-213ENST00000557262 OSTF1Q92882 214 aa14.23□□□□□ -0.13
TUBB3-213ENST00000557262 FAM120BQ96EK7 910 aaKnown RBP14.23□□□□□ -0.13
TUBB3-213ENST00000557262 SH3YL1Q96HL8 342 aaPredicted RBP14.23□□□□□ -0.13
TUBB3-213ENST00000557262 PPP3R2Q96LZ3 170 aa14.23□□□□□ -0.13
TUBB3-213ENST00000557262 RNF145Q96MT1 663 aa14.23□□□□□ -0.13
TUBB3-213ENST00000557262 HS3ST6Q96QI5 342 aa14.23□□□□□ -0.13
TUBB3-213ENST00000557262 STACQ99469 402 aa14.23□□□□□ -0.13
TUBB3-213ENST00000557262 PIGUQ9H490 435 aa14.23□□□□□ -0.13
TUBB3-213ENST00000557262 DUSP22Q9NRW4 184 aa14.23□□□□□ -0.13
TUBB3-213ENST00000557262 SIRT3Q9NTG7 399 aaPredicted RBP14.23□□□□□ -0.13
TUBB3-213ENST00000557262 GIN1Q9NXP7 522 aa14.23□□□□□ -0.13
TUBB3-213ENST00000557262 CLEC4AQ9UMR7 237 aa14.23□□□□□ -0.13
TUBB3-213ENST00000557262 A0A0J9YW62 118 aa14.22□□□□□ -0.13
TUBB3-213ENST00000557262 TMEM233B4DJY2 109 aa14.22□□□□□ -0.13
TUBB3-213ENST00000557262 TNFSF11O14788 317 aa14.22□□□□□ -0.13
TUBB3-213ENST00000557262 PIP5K1BO14986 540 aa14.22□□□□□ -0.13
TUBB3-213ENST00000557262 SOX30O94993 753 aa14.22□□□□□ -0.13
TUBB3-213ENST00000557262 HMGN2P05204 90 aaKnown RBP14.22□□□□□ -0.13
TUBB3-213ENST00000557262 CHRNGP07510 517 aa14.22□□□□□ -0.13
TUBB3-213ENST00000557262 ME2P23368 584 aa14.22□□□□□ -0.13
TUBB3-213ENST00000557262 MAPK1P28482 360 aa14.22□□□□□ -0.13
TUBB3-213ENST00000557262 CARD18P57730 90 aa14.22□□□□□ -0.13
TUBB3-213ENST00000557262 Q5PR19 223 aa14.22□□□□□ -0.13
TUBB3-213ENST00000557262 CCNJQ5T5M9 372 aa14.22□□□□□ -0.13
TUBB3-213ENST00000557262 HBMQ6B0K9 141 aa14.22□□□□□ -0.13
TUBB3-213ENST00000557262 PRSS57Q6UWY2 283 aa14.22□□□□□ -0.13
TUBB3-213ENST00000557262 CLEC9AQ6UXN8 241 aa14.22□□□□□ -0.13
TUBB3-213ENST00000557262 STAC2Q6ZMT1 411 aa14.22□□□□□ -0.13
TUBB3-213ENST00000557262 C20orf204Q6ZNR8 217 aa14.22□□□□□ -0.13
TUBB3-213ENST00000557262 BEND4Q6ZU67 534 aa14.22□□□□□ -0.13
TUBB3-213ENST00000557262 Q71RC1 249 aaPredicted RBP14.22□□□□□ -0.13
TUBB3-213ENST00000557262 TRABD2AQ86V40 505 aa14.22□□□□□ -0.13
TUBB3-213ENST00000557262 OR7A2PQ8NGA2 310 aa14.22□□□□□ -0.13
TUBB3-213ENST00000557262 POC1BQ8TC44 478 aa14.22□□□□□ -0.13
TUBB3-213ENST00000557262 JADE3Q92613 823 aa14.22□□□□□ -0.13
TUBB3-213ENST00000557262 OTUB1Q96FW1 271 aaPredicted RBP14.22□□□□□ -0.13
TUBB3-213ENST00000557262 CHMP6Q96FZ7 201 aa14.22□□□□□ -0.13
TUBB3-213ENST00000557262 APOPT1Q96IL0 206 aa14.22□□□□□ -0.13
TUBB3-213ENST00000557262 CCL19Q99731 98 aa14.22□□□□□ -0.13
TUBB3-213ENST00000557262 HOXD1Q9GZZ0 328 aa14.22□□□□□ -0.13
TUBB3-213ENST00000557262 ZNF395Q9H8N7 513 aaPredicted RBP14.22□□□□□ -0.13
TUBB3-213ENST00000557262 ZCCHC3Q9NUD5 404 aaKnown RBP14.22□□□□□ -0.13
TUBB3-213ENST00000557262 MKS1Q9NXB0 559 aa14.22□□□□□ -0.13
TUBB3-213ENST00000557262 FAM171A2A8MVW0 826 aa14.21□□□□□ -0.13
TUBB3-213ENST00000557262 SCAMP2O15127 329 aaKnown RBP14.21□□□□□ -0.13
TUBB3-213ENST00000557262 KLF4O43474 513 aa14.21□□□□□ -0.13
TUBB3-213ENST00000557262 PEX11AO75192 247 aa14.21□□□□□ -0.13
TUBB3-213ENST00000557262 THBDP07204 575 aa14.21□□□□□ -0.13
TUBB3-213ENST00000557262 LINGO3P0C6S8 592 aa14.21□□□□□ -0.13
TUBB3-213ENST00000557262 LAMP1P11279 417 aa14.21□□□□□ -0.13
TUBB3-213ENST00000557262 HPCAL1P37235 193 aa14.21□□□□□ -0.13
TUBB3-213ENST00000557262 EIF1P41567 113 aaKnown RBP14.21□□□□□ -0.13
TUBB3-213ENST00000557262 CCT3P49368 545 aaKnown RBP14.21□□□□□ -0.13
TUBB3-213ENST00000557262 LASP1Q14847 261 aaKnown RBP14.21□□□□□ -0.13
TUBB3-213ENST00000557262 CD226Q15762 336 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms