RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 ENPP2Q13822 863 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 DPY19L1Q2PZI1 675 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 ZNF385BQ569K4 471 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 OTUD3Q5T2D3 398 aaPredicted RBP4.77□□□□□ -1.65
TMEM260-210ENST00000556422 DDI2Q5TDH0 399 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 AGBL4Q5VU57 503 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 KRT80Q6KB66 452 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 DHRS4L2Q6PKH6 230 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 DOK6Q6PKX4 331 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 CRTC3Q6UUV7 619 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 SERPINA11Q86U17 422 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 CACUL1Q86Y37 369 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 SYT12Q8IV01 421 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 TMEM132CQ8N3T6 1108 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 CLRN3Q8NCR9 226 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 ZNF740Q8NDX6 193 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 OR5T2Q8NGG2 359 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 OR2L2Q8NH16 312 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 NEK7Q8TDX7 302 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 CORO2AQ92828 525 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 ZHX1-C8orf76Q96EF9 292 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 RNF31Q96EP0 1072 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 NUDT11Q96G61 164 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 TMEM41AQ96HV5 264 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 PACRGQ96M98 296 aaPredicted RBP4.77□□□□□ -1.65
TMEM260-210ENST00000556422 SOX7Q9BT81 388 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 BDH2Q9BUT1 245 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 CNPPD1Q9BV87 410 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 PTDSS2Q9BVG9 487 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 HDAC8Q9BY41 377 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 PBX4Q9BYU1 374 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 POTEKPQ9BYX7 375 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 DNTTIP1Q9H147 329 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 ZNF768Q9H5H4 540 aaKnown RBP4.77□□□□□ -1.65
TMEM260-210ENST00000556422 GPATCH2Q9NW75 528 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 KCNIP3Q9Y2W7 256 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 MMACHCQ9Y4U1 282 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 KLF2Q9Y5W3 355 aaPredicted RBP4.77□□□□□ -1.65
TMEM260-210ENST00000556422 PQLC2LA1A4F0 135 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 PIPSLA2A3N6 862 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 TMEM229AB2RXF0 380 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 TOX3O15405 576 aaPredicted RBP4.77□□□□□ -1.65
TMEM260-210ENST00000556422 LINC01565O15544 149 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 OR10H2O60403 315 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 SCELO95171 688 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 SERPINA1P01009 418 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 SEMG1P04279 462 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 EPHX1P07099 455 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 IL1RNP18510 177 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 NPR2P20594 1047 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 ARL3P36405 182 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 PIGAP37287 484 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 CAPGP40121 348 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 MVDP53602 400 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 CTBSQ01459 385 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 NHLH1Q02575 133 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 CHRNB3Q05901 458 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 ACSM2AQ08AH3 577 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 DUOXA1Q1HG43 343 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 MPEG1Q2M385 716 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 ACSM2BQ68CK6 577 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 CES5AQ6NT32 575 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 PLEKHG7Q6ZR37 379 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 VN1R5Q7Z5H4 357 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 GALNT10Q86SR1 603 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 LHFPL3Q86UP9 236 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 LAS2Q8IYD9 372 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 ADPRHL1Q8NDY3 354 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 OR1E3Q8WZA6 343 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 TXNDC15Q96J42 360 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 PHOX2BQ99453 314 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 TTYH2Q9BSA4 534 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 SEPSECSQ9HD40 501 aaKnown RBP4.77□□□□□ -1.65
TMEM260-210ENST00000556422 CD320Q9NPF0 282 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 SLC22A11Q9NSA0 550 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 VNN3Q9NY84 501 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 SPHK1Q9NYA1 384 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 GDE1Q9NZC3 331 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 PDP1Q9P0J1 537 aaPredicted RBP4.77□□□□□ -1.65
TMEM260-210ENST00000556422 MYRFQ9Y2G1 1151 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 CSNK1G3Q9Y6M4 447 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 DMDP11532 3685 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 TBC1D3BA6NDS4 549 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 CLDN25C9JDP6 229 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 E9PI62 339 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 CLIC1O00299 241 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 ITGB1BP1O14713 200 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 SLC30A4O14863 429 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 KAT7O95251 611 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 CST1P01037 141 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 CSTBP04080 98 aaKnown RBP4.77□□□□□ -1.65
TMEM260-210ENST00000556422 SAGP10523 405 aaPredicted RBP4.77□□□□□ -1.65
TMEM260-210ENST00000556422 ERGP11308 486 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 PPP3CBP16298 524 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 IDSP22304 550 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 CBLP22681 906 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 EEF1B2P24534 225 aaKnown RBP4.77□□□□□ -1.65
TMEM260-210ENST00000556422 CD1BP29016 333 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 TACR3P29371 465 aa4.77□□□□□ -1.65
TMEM260-210ENST00000556422 AHRP35869 848 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms