RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 SYNGR4O95473 234 aa16.85■□□□□ 0.29
CDKN3-209ENST00000556102 LY6G6DO95868 133 aa16.85■□□□□ 0.29
CDKN3-209ENST00000556102 THBDP07204 575 aa16.85■□□□□ 0.29
CDKN3-209ENST00000556102 PSMA4P25789 261 aaKnown RBP16.85■□□□□ 0.29
CDKN3-209ENST00000556102 ZNF41P51814 821 aaPredicted RBP16.85■□□□□ 0.29
CDKN3-209ENST00000556102 RPL38P63173 70 aaKnown RBP16.85■□□□□ 0.29
CDKN3-209ENST00000556102 DUSP5Q16690 384 aa16.85■□□□□ 0.29
CDKN3-209ENST00000556102 RFTN2Q52LD8 501 aaPredicted RBP16.85■□□□□ 0.29
CDKN3-209ENST00000556102 CPTPQ5TA50 214 aa16.85■□□□□ 0.29
CDKN3-209ENST00000556102 ZCCHC12Q6PEW1 402 aa16.85■□□□□ 0.29
CDKN3-209ENST00000556102 ESPNLQ6ZVH7 1005 aa16.85■□□□□ 0.29
CDKN3-209ENST00000556102 C10orf107Q8IVU9 208 aa16.85■□□□□ 0.29
CDKN3-209ENST00000556102 COX18Q8N8Q8 333 aa16.85■□□□□ 0.29
CDKN3-209ENST00000556102 CLHC1Q8NHS4 586 aa16.85■□□□□ 0.29
CDKN3-209ENST00000556102 MTERF3Q96E29 417 aa16.85■□□□□ 0.29
CDKN3-209ENST00000556102 PERPQ96FX8 193 aa16.85■□□□□ 0.29
CDKN3-209ENST00000556102 RNF145Q96MT1 663 aa16.85■□□□□ 0.29
CDKN3-209ENST00000556102 NPAS1Q99742 590 aa16.85■□□□□ 0.29
CDKN3-209ENST00000556102 BDH2Q9BUT1 245 aa16.85■□□□□ 0.29
CDKN3-209ENST00000556102 TUBB1Q9H4B7 451 aa16.85■□□□□ 0.29
CDKN3-209ENST00000556102 UBQLN4Q9NRR5 601 aa16.85■□□□□ 0.29
CDKN3-209ENST00000556102 TMED5Q9Y3A6 229 aa16.85■□□□□ 0.29
CDKN3-209ENST00000556102 A0A1W2PQD3 144 aa16.84■□□□□ 0.29
CDKN3-209ENST00000556102 SCDO00767 359 aa16.84■□□□□ 0.29
CDKN3-209ENST00000556102 TNFSF11O14788 317 aa16.84■□□□□ 0.29
CDKN3-209ENST00000556102 LSM1O15116 133 aaKnown RBP16.84■□□□□ 0.29
CDKN3-209ENST00000556102 KLF4O43474 513 aa16.84■□□□□ 0.29
CDKN3-209ENST00000556102 CHEK2O96017 543 aa16.84■□□□□ 0.29
CDKN3-209ENST00000556102 ALOX5P09917 674 aa16.84■□□□□ 0.29
CDKN3-209ENST00000556102 HPGDP15428 266 aa16.84■□□□□ 0.29
CDKN3-209ENST00000556102 ME2P23368 584 aa16.84■□□□□ 0.29
CDKN3-209ENST00000556102 ASMTP46597 345 aa16.84■□□□□ 0.29
CDKN3-209ENST00000556102 SERPINB4P48594 390 aa16.84■□□□□ 0.29
CDKN3-209ENST00000556102 PRIM2P49643 509 aa16.84■□□□□ 0.29
CDKN3-209ENST00000556102 EXOSC6Q5RKV6 272 aaKnown RBP16.84■□□□□ 0.29
CDKN3-209ENST00000556102 KANK2Q63ZY3 851 aa16.84■□□□□ 0.29
CDKN3-209ENST00000556102 STAC2Q6ZMT1 411 aa16.84■□□□□ 0.29
CDKN3-209ENST00000556102 HOMEZQ8IX15 550 aa16.84■□□□□ 0.29
CDKN3-209ENST00000556102 CIARTQ8N365 385 aaPredicted RBP16.84■□□□□ 0.29
CDKN3-209ENST00000556102 C16orf58Q96GQ5 468 aa16.84■□□□□ 0.29
CDKN3-209ENST00000556102 SH3YL1Q96HL8 342 aaPredicted RBP16.84■□□□□ 0.29
CDKN3-209ENST00000556102 GATA5Q9BWX5 397 aaPredicted RBP16.84■□□□□ 0.29
CDKN3-209ENST00000556102 GSX2Q9BZM3 304 aa16.84■□□□□ 0.29
CDKN3-209ENST00000556102 TMEM185BQ9H7F4 350 aa16.84■□□□□ 0.29
CDKN3-209ENST00000556102 FBXO34Q9NWN3 711 aa16.84■□□□□ 0.29
CDKN3-209ENST00000556102 BAIAP2L1Q9UHR4 511 aa16.84■□□□□ 0.29
CDKN3-209ENST00000556102 DNAJC15Q9Y5T4 150 aa16.84■□□□□ 0.29
CDKN3-209ENST00000556102 NUP214P35658 2090 aaPredicted RBP16.84■□□□□ 0.29
CDKN3-209ENST00000556102 USF3Q68DE3 2245 aa16.84■□□□□ 0.29
CDKN3-209ENST00000556102 CSPG4Q6UVK1 2322 aa16.84■□□□□ 0.29
CDKN3-209ENST00000556102 DNHD1Q96M86 4753 aa16.83■□□□□ 0.29
CDKN3-209ENST00000556102 A0A0J9YW62 118 aa16.83■□□□□ 0.28
CDKN3-209ENST00000556102 SMIM23A6NLE4 172 aa16.83■□□□□ 0.28
CDKN3-209ENST00000556102 TRIM13O60858 407 aa16.83■□□□□ 0.28
CDKN3-209ENST00000556102 HSPA4LO95757 839 aa16.83■□□□□ 0.28
CDKN3-209ENST00000556102 OPN1LWP04000 364 aa16.83■□□□□ 0.28
CDKN3-209ENST00000556102 LINC00032P0C843 101 aa16.83■□□□□ 0.28
CDKN3-209ENST00000556102 DDX5P17844 614 aaKnown RBP16.83■□□□□ 0.28
CDKN3-209ENST00000556102 KRT4P19013 534 aa16.83■□□□□ 0.28
CDKN3-209ENST00000556102 PCLAFQ15004 111 aa16.83■□□□□ 0.28
CDKN3-209ENST00000556102 MLC1Q15049 377 aa16.83■□□□□ 0.28
CDKN3-209ENST00000556102 JMJD1CQ15652 2540 aa16.83■□□□□ 0.28
CDKN3-209ENST00000556102 PDSS1Q5T2R2 415 aa16.83■□□□□ 0.28
CDKN3-209ENST00000556102 HBMQ6B0K9 141 aa16.83■□□□□ 0.28
CDKN3-209ENST00000556102 ZNF704Q6ZNC4 412 aaPredicted RBP16.83■□□□□ 0.28
CDKN3-209ENST00000556102 BEND4Q6ZU67 534 aa16.83■□□□□ 0.28
CDKN3-209ENST00000556102 PLEKHM3Q6ZWE6 761 aa16.83■□□□□ 0.28
CDKN3-209ENST00000556102 R3HCC1LQ7Z5L2 792 aaKnown RBP16.83■□□□□ 0.28
CDKN3-209ENST00000556102 STK32CQ86UX6 486 aa16.83■□□□□ 0.28
CDKN3-209ENST00000556102 EIF1ADQ8N9N8 165 aaKnown RBP16.83■□□□□ 0.28
CDKN3-209ENST00000556102 B4GALNT2Q8NHY0 566 aa16.83■□□□□ 0.28
CDKN3-209ENST00000556102 POC1BQ8TC44 478 aa16.83■□□□□ 0.28
CDKN3-209ENST00000556102 UBLCP1Q8WVY7 318 aaPredicted RBP16.83■□□□□ 0.28
CDKN3-209ENST00000556102 JADE3Q92613 823 aa16.83■□□□□ 0.28
CDKN3-209ENST00000556102 OTUB1Q96FW1 271 aaPredicted RBP16.83■□□□□ 0.28
CDKN3-209ENST00000556102 TUBBP07437 444 aa16.82■□□□□ 0.28
CDKN3-209ENST00000556102 BCKDHAP12694 445 aa16.82■□□□□ 0.28
CDKN3-209ENST00000556102 EFNA1P20827 205 aaPredicted RBP16.82■□□□□ 0.28
CDKN3-209ENST00000556102 AGTR1P30556 359 aa16.82■□□□□ 0.28
CDKN3-209ENST00000556102 PTH2RP49190 550 aa16.82■□□□□ 0.28
CDKN3-209ENST00000556102 NR1H2P55055 460 aa16.82■□□□□ 0.28
CDKN3-209ENST00000556102 POU6F2P78424 691 aaPredicted RBP16.82■□□□□ 0.28
CDKN3-209ENST00000556102 GALNTL6Q49A17 601 aa16.82■□□□□ 0.28
CDKN3-209ENST00000556102 CCNJQ5T5M9 372 aa16.82■□□□□ 0.28
CDKN3-209ENST00000556102 GTF2IRD2BQ6EKJ0 949 aa16.82■□□□□ 0.28
CDKN3-209ENST00000556102 LRIG3Q6UXM1 1119 aa16.82■□□□□ 0.28
CDKN3-209ENST00000556102 GTF2IRD2Q86UP8 949 aa16.82■□□□□ 0.28
CDKN3-209ENST00000556102 TRABD2AQ86V40 505 aa16.82■□□□□ 0.28
CDKN3-209ENST00000556102 C4orf33Q8N1A6 199 aa16.82■□□□□ 0.28
CDKN3-209ENST00000556102 EPS8L3Q8TE67 593 aaKnown RBP16.82■□□□□ 0.28
CDKN3-209ENST00000556102 IGFBPL1Q8WX77 278 aa16.82■□□□□ 0.28
CDKN3-209ENST00000556102 FAM120BQ96EK7 910 aaKnown RBP16.82■□□□□ 0.28
CDKN3-209ENST00000556102 KLHL15Q96M94 604 aa16.82■□□□□ 0.28
CDKN3-209ENST00000556102 STACQ99469 402 aa16.82■□□□□ 0.28
CDKN3-209ENST00000556102 KLHDC3Q9BQ90 382 aa16.82■□□□□ 0.28
CDKN3-209ENST00000556102 BTBD2Q9BX70 525 aa16.82■□□□□ 0.28
CDKN3-209ENST00000556102 ACTR6Q9GZN1 396 aa16.82■□□□□ 0.28
CDKN3-209ENST00000556102 OR10A4Q9H209 315 aa16.82■□□□□ 0.28
CDKN3-209ENST00000556102 DUSP22Q9NRW4 184 aa16.82■□□□□ 0.28
CDKN3-209ENST00000556102 SIRT3Q9NTG7 399 aaPredicted RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms