RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 LRR1Q96L50 414 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 BMFQ96LC9 184 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 MICU1Q9BPX6 476 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 MEPEQ9NQ76 525 aaPredicted RBP6.51□□□□□ -1.37
SYNE2-216ENST00000555002 ZNF446Q9NWS9 450 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 STEAP1Q9UHE8 339 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 CD207Q9UJ71 328 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 AK6Q9Y3D8 172 aaKnown RBP6.51□□□□□ -1.37
SYNE2-216ENST00000555002 SERTM2A0A1B0GWG4 89 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 GLTPD2A6NH11 291 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 CXorf49A8MYA2 514 aaPredicted RBP6.51□□□□□ -1.37
SYNE2-216ENST00000555002 ZNF736B4DX44 427 aaPredicted RBP6.51□□□□□ -1.37
SYNE2-216ENST00000555002 STSP08842 583 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 PCSK2P16519 638 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 FOXN2P32314 431 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 PXNP49023 591 aaPredicted RBP6.51□□□□□ -1.37
SYNE2-216ENST00000555002 NKX3-2P78367 333 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 FIGLAQ6QHK4 219 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 ZNF836Q6ZNA1 936 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 PSMF1Q92530 271 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 ASB9Q96DX5 294 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 FCRL5Q96RD9 977 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 UBL7Q96S82 380 aaPredicted RBP6.51□□□□□ -1.37
SYNE2-216ENST00000555002 HDHD5Q9BXW7 423 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 SOWAHBA6NEL2 793 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 TGFB1I1O43294 461 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 CER1O95813 267 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 EDN1P05305 212 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 PSMB10P40306 273 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 TGFBIQ15582 683 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 OR2T4Q8NH00 348 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 ANKRD9Q96BM1 317 aaPredicted RBP6.51□□□□□ -1.37
SYNE2-216ENST00000555002 THOC3Q96J01 351 aaKnown RBP6.51□□□□□ -1.37
SYNE2-216ENST00000555002 CCDC32Q9BV29 185 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 COL20A1Q9P218 1284 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 NOTCH3Q9UM47 2321 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 ANHXE9PGG2 379 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 H3BSA7 217 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 DRD5P21918 477 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 RAD52P43351 418 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 AGFG1P52594 562 aaKnown RBP6.51□□□□□ -1.37
SYNE2-216ENST00000555002 EVX2Q03828 476 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 MSMO1Q15800 293 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 MEDAGQ5VYS4 303 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 LCN10Q6JVE6 187 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 Q6ZVL8 140 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 SPARTQ8N0X7 666 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 LINC01599Q8WXQ3 324 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 B3GNT3Q9Y2A9 372 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 KDM4FA0A1W2PPD8 638 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 CERS1P27544 350 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 TP53I3Q53FA7 332 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 NLRP8Q86W28 1048 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 AQP12AQ8IXF9 295 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 SCRN2Q96FV2 425 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 CPNE5Q9HCH3 593 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 KCNJ16Q9NPI9 418 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 ARMC1Q9NVT9 282 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 C2orf78A6NCI8 922 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 BHLHE40O14503 412 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 POU2F2P09086 479 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 HLA-DOBP13765 273 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 TAS2R31P59538 309 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 GPX6P59796 221 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 SIM1P81133 766 aaPredicted RBP6.51□□□□□ -1.37
SYNE2-216ENST00000555002 ZXDBP98169 803 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 MAL2Q969L2 176 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 WDR6Q9NNW5 1121 aaKnown RBP6.51□□□□□ -1.37
SYNE2-216ENST00000555002 USP32Q8NFA0 1604 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 F5H5P2 479 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 BET1O15155 118 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 TXNDC12O95881 172 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 NDUFB7P17568 137 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 PKLRP30613 574 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 BMXP51813 675 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 EDDM3AQ14507 147 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 ENPP6Q6UWR7 440 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 Q6ZSR6 202 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 ZFP57Q9NU63 452 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 NAV1Q8NEY1 1877 aa6.51□□□□□ -1.37
SYNE2-216ENST00000555002 OR6C65A6NJZ3 312 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 B4DXG7 233 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 MED6O75586 246 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 RPA2P15927 270 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 EFNA3P52797 238 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 NKX2-5P52952 324 aaPredicted RBP6.5□□□□□ -1.37
SYNE2-216ENST00000555002 INPP4AQ96PE3 977 aaPredicted RBP6.5□□□□□ -1.37
SYNE2-216ENST00000555002 ALOXE3Q9BYJ1 711 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 ACKR4Q9NPB9 350 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 DCAF16Q9NXF7 216 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 TRAPPC2LQ9UL33 140 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 FBXO7Q9Y3I1 522 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 ZNF407Q9C0G0 2248 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 A6NIZ1 184 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 ACRV1P26436 265 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 CLDN2P57739 230 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 RAP1BP61224 184 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 RAP1AP62834 184 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 KIAA1211LQ6NV74 962 aa6.5□□□□□ -1.37
SYNE2-216ENST00000555002 XKR5Q6UX68 686 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms