RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 NDC1Q9BTX1 674 aa8.22□□□□□ -1.09
TDP1-210ENST00000554976 LHPPQ9H008 270 aa8.22□□□□□ -1.09
TDP1-210ENST00000554976 MKKSQ9NPJ1 570 aaPredicted RBP8.22□□□□□ -1.09
TDP1-210ENST00000554976 ENOPH1Q9UHY7 261 aa8.22□□□□□ -1.09
TDP1-210ENST00000554976 SERTAD3Q9UJW9 196 aa8.22□□□□□ -1.09
TDP1-210ENST00000554976 A0A0B4J2E0 115 aa8.21□□□□□ -1.09
TDP1-210ENST00000554976 A0A1B0GX12 115 aa8.21□□□□□ -1.09
TDP1-210ENST00000554976 M0R129 80 aa8.21□□□□□ -1.09
TDP1-210ENST00000554976 TO15178 435 aa8.21□□□□□ -1.09
TDP1-210ENST00000554976 FGF5P12034 268 aa8.21□□□□□ -1.09
TDP1-210ENST00000554976 GAS1P54826 345 aa8.21□□□□□ -1.09
TDP1-210ENST00000554976 ST3GAL3Q11203 375 aa8.21□□□□□ -1.09
TDP1-210ENST00000554976 DOC2BQ14184 412 aa8.21□□□□□ -1.09
TDP1-210ENST00000554976 ELAVL1Q15717 326 aaKnown RBP8.21□□□□□ -1.09
TDP1-210ENST00000554976 PDZK1Q5T2W1 519 aa8.21□□□□□ -1.09
TDP1-210ENST00000554976 LAPTM4BQ86VI4 370 aa8.21□□□□□ -1.09
TDP1-210ENST00000554976 NFAM1Q8NET5 270 aaPredicted RBP8.21□□□□□ -1.09
TDP1-210ENST00000554976 TOR1AIP2Q8NFQ8 470 aa8.21□□□□□ -1.09
TDP1-210ENST00000554976 WDR36Q8NI36 951 aaKnown RBP8.21□□□□□ -1.09
TDP1-210ENST00000554976 ACOT11Q8WXI4 607 aaPredicted RBP8.21□□□□□ -1.09
TDP1-210ENST00000554976 NAT6Q93015 286 aa8.21□□□□□ -1.09
TDP1-210ENST00000554976 SEMA4CQ9C0C4 833 aa8.21□□□□□ -1.09
TDP1-210ENST00000554976 CTSFQ9UBX1 484 aa8.21□□□□□ -1.09
TDP1-210ENST00000554976 TMCC3Q9ULS5 477 aa8.21□□□□□ -1.09
TDP1-210ENST00000554976 CBLCQ9ULV8 474 aa8.21□□□□□ -1.09
TDP1-210ENST00000554976 CDC14AQ9UNH5 594 aa8.21□□□□□ -1.09
TDP1-210ENST00000554976 PCDHGB2Q9Y5G2 931 aa8.21□□□□□ -1.09
TDP1-210ENST00000554976 SPTBP11277 2137 aa8.21□□□□□ -1.09
TDP1-210ENST00000554976 FRG2CA6NGY1 282 aa8.21□□□□□ -1.1
TDP1-210ENST00000554976 OR10H3O60404 316 aa8.21□□□□□ -1.1
TDP1-210ENST00000554976 FPR3P25089 353 aa8.21□□□□□ -1.1
TDP1-210ENST00000554976 PCSK6P29122 969 aa8.21□□□□□ -1.1
TDP1-210ENST00000554976 UGT2B15P54855 530 aa8.21□□□□□ -1.1
TDP1-210ENST00000554976 TAS2R41P59536 307 aa8.21□□□□□ -1.1
TDP1-210ENST00000554976 CSNK2BP67870 215 aa8.21□□□□□ -1.1
TDP1-210ENST00000554976 IL1RL1Q01638 556 aa8.21□□□□□ -1.1
TDP1-210ENST00000554976 MVKQ03426 396 aa8.21□□□□□ -1.1
TDP1-210ENST00000554976 TSPAN31Q12999 210 aa8.21□□□□□ -1.1
TDP1-210ENST00000554976 TUBA3CQ13748 450 aa8.21□□□□□ -1.1
TDP1-210ENST00000554976 OR1Q1Q15612 314 aa8.21□□□□□ -1.1
TDP1-210ENST00000554976 TRIM61Q5EBN2 209 aa8.21□□□□□ -1.1
TDP1-210ENST00000554976 LCN10Q6JVE6 187 aa8.21□□□□□ -1.1
TDP1-210ENST00000554976 PWWP2BQ6NUJ5 590 aa8.21□□□□□ -1.1
TDP1-210ENST00000554976 B3GNT6Q6ZMB0 384 aa8.21□□□□□ -1.1
TDP1-210ENST00000554976 SLC16A12Q6ZSM3 486 aa8.21□□□□□ -1.1
TDP1-210ENST00000554976 PRSS48Q7RTY5 328 aa8.21□□□□□ -1.1
TDP1-210ENST00000554976 CMIPQ8IY22 773 aa8.21□□□□□ -1.1
TDP1-210ENST00000554976 C7orf57Q8NEG2 295 aa8.21□□□□□ -1.1
TDP1-210ENST00000554976 BPIFB6Q8NFQ5 453 aa8.21□□□□□ -1.1
TDP1-210ENST00000554976 GNPDA2Q8TDQ7 276 aa8.21□□□□□ -1.1
TDP1-210ENST00000554976 CNOT9Q92600 299 aaKnown RBP8.21□□□□□ -1.1
TDP1-210ENST00000554976 GGHQ92820 318 aa8.21□□□□□ -1.1
TDP1-210ENST00000554976 ISOC1Q96CN7 298 aa8.21□□□□□ -1.1
TDP1-210ENST00000554976 SENP5Q96HI0 755 aaPredicted RBP8.21□□□□□ -1.1
TDP1-210ENST00000554976 NUDT9Q9BW91 350 aa8.21□□□□□ -1.1
TDP1-210ENST00000554976 SLC26A1Q9H2B4 701 aa8.21□□□□□ -1.1
TDP1-210ENST00000554976 ADNPQ9H2P0 1102 aa8.21□□□□□ -1.1
TDP1-210ENST00000554976 FANCEQ9HB96 536 aa8.21□□□□□ -1.1
TDP1-210ENST00000554976 CTPS2Q9NRF8 586 aa8.21□□□□□ -1.1
TDP1-210ENST00000554976 SLC7A7Q9UM01 511 aa8.21□□□□□ -1.1
TDP1-210ENST00000554976 SRPK3Q9UPE1 567 aa8.21□□□□□ -1.1
TDP1-210ENST00000554976 CARD8Q9Y2G2 431 aa8.21□□□□□ -1.1
TDP1-210ENST00000554976 ASXL3Q9C0F0 2248 aa8.21□□□□□ -1.1
TDP1-210ENST00000554976 CPED1A4D0V7 1026 aa8.21□□□□□ -1.1
TDP1-210ENST00000554976 D6RAR5 112 aa8.21□□□□□ -1.1
TDP1-210ENST00000554976 IL33O95760 270 aa8.21□□□□□ -1.1
TDP1-210ENST00000554976 CFIP05156 583 aa8.21□□□□□ -1.1
TDP1-210ENST00000554976 GKN3PP0CG01 181 aa8.21□□□□□ -1.1
TDP1-210ENST00000554976 ACP1P24666 158 aa8.21□□□□□ -1.1
TDP1-210ENST00000554976 PPICP45877 212 aa8.21□□□□□ -1.1
TDP1-210ENST00000554976 LIMK1P53667 647 aa8.21□□□□□ -1.1
TDP1-210ENST00000554976 CTBP2P56545 445 aa8.21□□□□□ -1.1
TDP1-210ENST00000554976 RGS8P57771 180 aaPredicted RBP8.21□□□□□ -1.1
TDP1-210ENST00000554976 ACY1Q03154 408 aa8.21□□□□□ -1.1
TDP1-210ENST00000554976 PRKCDQ05655 676 aa8.21□□□□□ -1.1
TDP1-210ENST00000554976 TARDBPQ13148 414 aaKnown RBP eCLIP8.21□□□□□ -1.1
TDP1-210ENST00000554976 EBPQ15125 230 aaKnown RBP8.21□□□□□ -1.1
TDP1-210ENST00000554976 FLYWCH1Q4VC44 716 aa8.21□□□□□ -1.1
TDP1-210ENST00000554976 RASSF6Q6ZTQ3 369 aa8.21□□□□□ -1.1
TDP1-210ENST00000554976 CROCCP3Q8IVE0 287 aa8.21□□□□□ -1.1
TDP1-210ENST00000554976 TAGAPQ8N103 731 aa8.21□□□□□ -1.1
TDP1-210ENST00000554976 AMER2Q8N7J2 671 aa8.21□□□□□ -1.1
TDP1-210ENST00000554976 CLDN22Q8N7P3 220 aa8.21□□□□□ -1.1
TDP1-210ENST00000554976 ZNF420Q8TAQ5 688 aaPredicted RBP8.21□□□□□ -1.1
TDP1-210ENST00000554976 IPCEF1Q8WWN9 437 aaPredicted RBP8.21□□□□□ -1.1
TDP1-210ENST00000554976 YIPF6Q96EC8 236 aa8.21□□□□□ -1.1
TDP1-210ENST00000554976 PTCHD1Q96NR3 888 aa8.21□□□□□ -1.1
TDP1-210ENST00000554976 SLC46A1Q96NT5 459 aa8.21□□□□□ -1.1
TDP1-210ENST00000554976 NODALQ96S42 347 aa8.21□□□□□ -1.1
TDP1-210ENST00000554976 DSN1Q9H410 356 aa8.21□□□□□ -1.1
TDP1-210ENST00000554976 POLR1BQ9H9Y6 1135 aa8.21□□□□□ -1.1
TDP1-210ENST00000554976 ZNF556Q9HAH1 456 aa8.21□□□□□ -1.1
TDP1-210ENST00000554976 RASSF1Q9NS23 344 aa8.21□□□□□ -1.1
TDP1-210ENST00000554976 CDC42EP2O14613 210 aa8.2□□□□□ -1.1
TDP1-210ENST00000554976 MAGEB3O15480 346 aa8.2□□□□□ -1.1
TDP1-210ENST00000554976 CCNYL3P0C7X3 344 aa8.2□□□□□ -1.1
TDP1-210ENST00000554976 PIPP12273 146 aaPredicted RBP8.2□□□□□ -1.1
TDP1-210ENST00000554976 TBXA2RP21731 343 aa8.2□□□□□ -1.1
TDP1-210ENST00000554976 SYT6Q5T7P8 510 aaPredicted RBP8.2□□□□□ -1.1
TDP1-210ENST00000554976 UBE2UQ5VVX9 321 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms