RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 FBP1P09467 338 aa14.64□□□□□ -0.07
SYNE3-203ENST00000554873 GALP22466 123 aa14.64□□□□□ -0.07
SYNE3-203ENST00000554873 CD79BP40259 229 aa14.64□□□□□ -0.07
SYNE3-203ENST00000554873 CAPZA1P52907 286 aa14.64□□□□□ -0.07
SYNE3-203ENST00000554873 LMAN2Q12907 356 aa14.64□□□□□ -0.07
SYNE3-203ENST00000554873 GPNMBQ14956 572 aa14.64□□□□□ -0.07
SYNE3-203ENST00000554873 TRAM2Q15035 370 aa14.64□□□□□ -0.07
SYNE3-203ENST00000554873 PLEKHS1Q5SXH7 462 aa14.64□□□□□ -0.07
SYNE3-203ENST00000554873 GCNT6Q5T4J0 391 aa14.64□□□□□ -0.07
SYNE3-203ENST00000554873 ANGPTL8Q6UXH0 198 aa14.64□□□□□ -0.07
SYNE3-203ENST00000554873 SLC30A8Q8IWU4 369 aa14.64□□□□□ -0.07
SYNE3-203ENST00000554873 ZFP82Q8N141 532 aa14.64□□□□□ -0.07
SYNE3-203ENST00000554873 IQCF1Q8N6M8 205 aa14.64□□□□□ -0.07
SYNE3-203ENST00000554873 CELF5Q8N6W0 485 aaKnown RBP14.64□□□□□ -0.07
SYNE3-203ENST00000554873 TRMT2BQ96GJ1 504 aaKnown RBP14.64□□□□□ -0.07
SYNE3-203ENST00000554873 CPEB1Q9BZB8 566 aaKnown RBP14.64□□□□□ -0.07
SYNE3-203ENST00000554873 UCK1Q9HA47 277 aa14.64□□□□□ -0.07
SYNE3-203ENST00000554873 OR6C68A6NDL8 312 aa14.64□□□□□ -0.07
SYNE3-203ENST00000554873 RAD1O60671 282 aa14.64□□□□□ -0.07
SYNE3-203ENST00000554873 UGDHO60701 494 aa14.64□□□□□ -0.07
SYNE3-203ENST00000554873 THBS2P35442 1172 aa14.64□□□□□ -0.07
SYNE3-203ENST00000554873 CTSOP43234 321 aaPredicted RBP14.64□□□□□ -0.07
SYNE3-203ENST00000554873 DGCR2P98153 550 aa14.64□□□□□ -0.07
SYNE3-203ENST00000554873 ANXA8L1Q5VT79 327 aa14.64□□□□□ -0.07
SYNE3-203ENST00000554873 PRAMEF13Q5VWM6 474 aa14.64□□□□□ -0.07
SYNE3-203ENST00000554873 Q6ZNB5 142 aa14.64□□□□□ -0.07
SYNE3-203ENST00000554873 SERPINA12Q8IW75 414 aa14.64□□□□□ -0.07
SYNE3-203ENST00000554873 NFKBIDQ8NI38 313 aa14.64□□□□□ -0.07
SYNE3-203ENST00000554873 PHOSPHO2Q8TCD6 241 aa14.64□□□□□ -0.07
SYNE3-203ENST00000554873 VN1R3Q9BXE9 311 aa14.64□□□□□ -0.07
SYNE3-203ENST00000554873 C14orf105Q9NVL8 296 aa14.64□□□□□ -0.07
SYNE3-203ENST00000554873 FLVCR2Q9UPI3 526 aa14.64□□□□□ -0.07
SYNE3-203ENST00000554873 TET1Q8NFU7 2136 aa14.63□□□□□ -0.07
SYNE3-203ENST00000554873 TRBC2A0A5B9 178 aa14.63□□□□□ -0.07
SYNE3-203ENST00000554873 OR10H3O60404 316 aa14.63□□□□□ -0.07
SYNE3-203ENST00000554873 ITGA10O75578 1167 aa14.63□□□□□ -0.07
SYNE3-203ENST00000554873 LATS1O95835 1130 aa14.63□□□□□ -0.07
SYNE3-203ENST00000554873 CD70P32970 193 aa14.63□□□□□ -0.07
SYNE3-203ENST00000554873 SNRPEP62304 92 aaKnown RBP14.63□□□□□ -0.07
SYNE3-203ENST00000554873 SIM1P81133 766 aaPredicted RBP14.63□□□□□ -0.07
SYNE3-203ENST00000554873 SHC2P98077 582 aa14.63□□□□□ -0.07
SYNE3-203ENST00000554873 PITPNAQ00169 270 aa14.63□□□□□ -0.07
SYNE3-203ENST00000554873 KLF9Q13886 244 aaPredicted RBP14.63□□□□□ -0.07
SYNE3-203ENST00000554873 CRB2Q5IJ48 1285 aa14.63□□□□□ -0.07
SYNE3-203ENST00000554873 TXNDC8Q6A555 127 aa14.63□□□□□ -0.07
SYNE3-203ENST00000554873 CPXM2Q8N436 756 aa14.63□□□□□ -0.07
SYNE3-203ENST00000554873 GPR156Q8NFN8 814 aa14.63□□□□□ -0.07
SYNE3-203ENST00000554873 OR11G2Q8NGC1 345 aa14.63□□□□□ -0.07
SYNE3-203ENST00000554873 OR4K1Q8NGD4 311 aa14.63□□□□□ -0.07
SYNE3-203ENST00000554873 ZNF461Q8TAF7 563 aa14.63□□□□□ -0.07
SYNE3-203ENST00000554873 RAD51AP1Q96B01 352 aa14.63□□□□□ -0.07
SYNE3-203ENST00000554873 TCEAL7Q9BRU2 100 aa14.63□□□□□ -0.07
SYNE3-203ENST00000554873 FAIM2Q9BWQ8 316 aa14.63□□□□□ -0.07
SYNE3-203ENST00000554873 SGK2Q9HBY8 427 aa14.63□□□□□ -0.07
SYNE3-203ENST00000554873 NFKBIL1Q9UBC1 381 aaPredicted RBP14.63□□□□□ -0.07
SYNE3-203ENST00000554873 YIPF1Q9Y548 306 aa14.63□□□□□ -0.07
SYNE3-203ENST00000554873 MGAT4DA6NG13 374 aa14.63□□□□□ -0.07
SYNE3-203ENST00000554873 SEMA7AO75326 666 aa14.63□□□□□ -0.07
SYNE3-203ENST00000554873 UBL3O95164 117 aa14.63□□□□□ -0.07
SYNE3-203ENST00000554873 IFNGR1P15260 489 aa14.63□□□□□ -0.07
SYNE3-203ENST00000554873 ASMTP46597 345 aa14.63□□□□□ -0.07
SYNE3-203ENST00000554873 DCDP81605 110 aaKnown RBP14.63□□□□□ -0.07
SYNE3-203ENST00000554873 MLLT1Q03111 559 aaPredicted RBP14.63□□□□□ -0.07
SYNE3-203ENST00000554873 NAE1Q13564 534 aa14.63□□□□□ -0.07
SYNE3-203ENST00000554873 ZNF385BQ569K4 471 aa14.63□□□□□ -0.07
SYNE3-203ENST00000554873 TMEM255AQ5JRV8 349 aa14.63□□□□□ -0.07
SYNE3-203ENST00000554873 UQCC3Q6UW78 93 aa14.63□□□□□ -0.07
SYNE3-203ENST00000554873 CAMKMTQ7Z624 323 aa14.63□□□□□ -0.07
SYNE3-203ENST00000554873 DNAJB7Q7Z6W7 309 aaPredicted RBP14.63□□□□□ -0.07
SYNE3-203ENST00000554873 MEIOBQ8N635 442 aa14.63□□□□□ -0.07
SYNE3-203ENST00000554873 RELL2Q8NC24 303 aaPredicted RBP14.63□□□□□ -0.07
SYNE3-203ENST00000554873 SUV39H2Q9H5I1 410 aa14.63□□□□□ -0.07
SYNE3-203ENST00000554873 SEBOXQ9HB31 216 aaPredicted RBP14.63□□□□□ -0.07
SYNE3-203ENST00000554873 BARX1Q9HBU1 254 aaPredicted RBP14.63□□□□□ -0.07
SYNE3-203ENST00000554873 PRM3Q9NNZ6 103 aa14.63□□□□□ -0.07
SYNE3-203ENST00000554873 NANSQ9NR45 359 aa14.63□□□□□ -0.07
SYNE3-203ENST00000554873 RASD1Q9Y272 281 aa14.63□□□□□ -0.07
SYNE3-203ENST00000554873 PLEKHM1Q9Y4G2 1056 aa14.63□□□□□ -0.07
SYNE3-203ENST00000554873 H0YIV9 168 aa14.62□□□□□ -0.07
SYNE3-203ENST00000554873 TO15178 435 aa14.62□□□□□ -0.07
SYNE3-203ENST00000554873 CHST10O43529 356 aa14.62□□□□□ -0.07
SYNE3-203ENST00000554873 LCMT2O60294 686 aaKnown RBP14.62□□□□□ -0.07
SYNE3-203ENST00000554873 PAICSP22234 425 aaKnown RBP14.62□□□□□ -0.07
SYNE3-203ENST00000554873 HBA1P69905 142 aa14.62□□□□□ -0.07
SYNE3-203ENST00000554873 TCTN1Q2MV58 587 aa14.62□□□□□ -0.07
SYNE3-203ENST00000554873 SLC44A3Q8N4M1 653 aa14.62□□□□□ -0.07
SYNE3-203ENST00000554873 OR6K3Q8NGY3 331 aa14.62□□□□□ -0.07
SYNE3-203ENST00000554873 ASZ1Q8WWH4 475 aa14.62□□□□□ -0.07
SYNE3-203ENST00000554873 ECHDC3Q96DC8 303 aa14.62□□□□□ -0.07
SYNE3-203ENST00000554873 ENKD1Q9H0I2 346 aa14.62□□□□□ -0.07
SYNE3-203ENST00000554873 PRMT8Q9NR22 394 aaPredicted RBP14.62□□□□□ -0.07
SYNE3-203ENST00000554873 ZNF282Q9UDV7 671 aaPredicted RBP14.62□□□□□ -0.07
SYNE3-203ENST00000554873 ENTPD4Q9Y227 616 aa14.62□□□□□ -0.07
SYNE3-203ENST00000554873 PPIL1Q9Y3C6 166 aa14.62□□□□□ -0.07
SYNE3-203ENST00000554873 BACE2Q9Y5Z0 518 aa14.62□□□□□ -0.07
SYNE3-203ENST00000554873 TMEM88BA6NKF7 163 aa14.62□□□□□ -0.07
SYNE3-203ENST00000554873 ZNF729A6NN14 1252 aaPredicted RBP14.62□□□□□ -0.07
SYNE3-203ENST00000554873 LRRN3E7EW58 273 aa14.62□□□□□ -0.07
SYNE3-203ENST00000554873 FFAR1O14842 300 aa14.62□□□□□ -0.07
SYNE3-203ENST00000554873 PRODHO43272 600 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms