RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 C16orf58Q96GQ5 468 aa16.83■□□□□ 0.28
CPSF2-203ENST00000554290 ZC3HAV1LQ96H79 300 aaKnown RBP16.83■□□□□ 0.28
CPSF2-203ENST00000554290 UBTD1Q9HAC8 227 aa16.83■□□□□ 0.28
CPSF2-203ENST00000554290 GLRX2Q9NS18 164 aa16.83■□□□□ 0.28
CPSF2-203ENST00000554290 ZCCHC3Q9NUD5 404 aaKnown RBP16.83■□□□□ 0.28
CPSF2-203ENST00000554290 TRAF6Q9Y4K3 522 aa16.83■□□□□ 0.28
CPSF2-203ENST00000554290 FLNAP21333 2647 aaKnown RBP16.83■□□□□ 0.28
CPSF2-203ENST00000554290 ZFHX3Q15911 3703 aa16.82■□□□□ 0.28
CPSF2-203ENST00000554290 A0A1W2PQD3 144 aa16.82■□□□□ 0.28
CPSF2-203ENST00000554290 A0A1W2PRB8 838 aa16.82■□□□□ 0.28
CPSF2-203ENST00000554290 TLDC2A0PJX2 215 aa16.82■□□□□ 0.28
CPSF2-203ENST00000554290 ADAMDEC1O15204 470 aa16.82■□□□□ 0.28
CPSF2-203ENST00000554290 NPHS1O60500 1241 aa16.82■□□□□ 0.28
CPSF2-203ENST00000554290 IL11P20809 199 aa16.82■□□□□ 0.28
CPSF2-203ENST00000554290 SLC6A8P48029 635 aa16.82■□□□□ 0.28
CPSF2-203ENST00000554290 POU6F2P78424 691 aaPredicted RBP16.82■□□□□ 0.28
CPSF2-203ENST00000554290 PLPPR5Q32ZL2 321 aa16.82■□□□□ 0.28
CPSF2-203ENST00000554290 ANKRD34AQ69YU3 496 aa16.82■□□□□ 0.28
CPSF2-203ENST00000554290 GTF2IRD2BQ6EKJ0 949 aa16.82■□□□□ 0.28
CPSF2-203ENST00000554290 ESPNLQ6ZVH7 1005 aa16.82■□□□□ 0.28
CPSF2-203ENST00000554290 ZAR1Q86SH2 424 aa16.82■□□□□ 0.28
CPSF2-203ENST00000554290 GTF2IRD2Q86UP8 949 aa16.82■□□□□ 0.28
CPSF2-203ENST00000554290 KRTAP1-3Q8IUG1 177 aa16.82■□□□□ 0.28
CPSF2-203ENST00000554290 LRRN4CLQ8ND94 238 aa16.82■□□□□ 0.28
CPSF2-203ENST00000554290 SH3YL1Q96HL8 342 aaPredicted RBP16.82■□□□□ 0.28
CPSF2-203ENST00000554290 APOPT1Q96IL0 206 aa16.82■□□□□ 0.28
CPSF2-203ENST00000554290 PPP3R2Q96LZ3 170 aa16.82■□□□□ 0.28
CPSF2-203ENST00000554290 BTBD2Q9BX70 525 aa16.82■□□□□ 0.28
CPSF2-203ENST00000554290 ZNF395Q9H8N7 513 aaPredicted RBP16.82■□□□□ 0.28
CPSF2-203ENST00000554290 DUSP22Q9NRW4 184 aa16.82■□□□□ 0.28
CPSF2-203ENST00000554290 MED17Q9NVC6 651 aa16.82■□□□□ 0.28
CPSF2-203ENST00000554290 MKS1Q9NXB0 559 aa16.82■□□□□ 0.28
CPSF2-203ENST00000554290 ATP6V1HQ9UI12 483 aa16.82■□□□□ 0.28
CPSF2-203ENST00000554290 FAM171A2A8MVW0 826 aa16.81■□□□□ 0.28
CPSF2-203ENST00000554290 PIP5K1BO14986 540 aa16.81■□□□□ 0.28
CPSF2-203ENST00000554290 CXCL13O43927 109 aa16.81■□□□□ 0.28
CPSF2-203ENST00000554290 SS18L1O75177 396 aaPredicted RBP16.81■□□□□ 0.28
CPSF2-203ENST00000554290 SOX30O94993 753 aa16.81■□□□□ 0.28
CPSF2-203ENST00000554290 HMGN2P05204 90 aaKnown RBP16.81■□□□□ 0.28
CPSF2-203ENST00000554290 CHRNGP07510 517 aa16.81■□□□□ 0.28
CPSF2-203ENST00000554290 EFNA1P20827 205 aaPredicted RBP16.81■□□□□ 0.28
CPSF2-203ENST00000554290 PSMA4P25789 261 aaKnown RBP16.81■□□□□ 0.28
CPSF2-203ENST00000554290 ALDH3A1P30838 453 aa16.81■□□□□ 0.28
CPSF2-203ENST00000554290 UGT3A2Q3SY77 523 aa16.81■□□□□ 0.28
CPSF2-203ENST00000554290 ARL13AQ5H913 290 aaPredicted RBP16.81■□□□□ 0.28
CPSF2-203ENST00000554290 Q5PR19 223 aa16.81■□□□□ 0.28
CPSF2-203ENST00000554290 CCNJQ5T5M9 372 aa16.81■□□□□ 0.28
CPSF2-203ENST00000554290 HBMQ6B0K9 141 aa16.81■□□□□ 0.28
CPSF2-203ENST00000554290 C20orf204Q6ZNR8 217 aa16.81■□□□□ 0.28
CPSF2-203ENST00000554290 BEND4Q6ZU67 534 aa16.81■□□□□ 0.28
CPSF2-203ENST00000554290 STK32CQ86UX6 486 aa16.81■□□□□ 0.28
CPSF2-203ENST00000554290 BANPQ8N9N5 519 aa16.81■□□□□ 0.28
CPSF2-203ENST00000554290 OR2V1Q8NHB1 315 aa16.81■□□□□ 0.28
CPSF2-203ENST00000554290 B4GALNT2Q8NHY0 566 aa16.81■□□□□ 0.28
CPSF2-203ENST00000554290 FAM120BQ96EK7 910 aaKnown RBP16.81■□□□□ 0.28
CPSF2-203ENST00000554290 ADGRG7Q96K78 797 aa16.81■□□□□ 0.28
CPSF2-203ENST00000554290 MARK4Q96L34 752 aa16.81■□□□□ 0.28
CPSF2-203ENST00000554290 RNF145Q96MT1 663 aa16.81■□□□□ 0.28
CPSF2-203ENST00000554290 STACQ99469 402 aa16.81■□□□□ 0.28
CPSF2-203ENST00000554290 CCL19Q99731 98 aa16.81■□□□□ 0.28
CPSF2-203ENST00000554290 ATAD3AQ9NVI7 634 aa16.81■□□□□ 0.28
CPSF2-203ENST00000554290 FBXO34Q9NWN3 711 aa16.81■□□□□ 0.28
CPSF2-203ENST00000554290 GIN1Q9NXP7 522 aa16.81■□□□□ 0.28
CPSF2-203ENST00000554290 CLEC4AQ9UMR7 237 aa16.81■□□□□ 0.28
CPSF2-203ENST00000554290 TMEM233B4DJY2 109 aa16.8■□□□□ 0.28
CPSF2-203ENST00000554290 TNFSF11O14788 317 aa16.8■□□□□ 0.28
CPSF2-203ENST00000554290 SCAMP2O15127 329 aaKnown RBP16.8■□□□□ 0.28
CPSF2-203ENST00000554290 OPN1LWP04000 364 aa16.8■□□□□ 0.28
CPSF2-203ENST00000554290 ATP6V1C1P21283 382 aa16.8■□□□□ 0.28
CPSF2-203ENST00000554290 EIF1P41567 113 aaKnown RBP16.8■□□□□ 0.28
CPSF2-203ENST00000554290 LTBQ06643 244 aa16.8■□□□□ 0.28
CPSF2-203ENST00000554290 CTU2Q2VPK5 515 aaKnown RBP16.8■□□□□ 0.28
CPSF2-203ENST00000554290 EXOSC6Q5RKV6 272 aaKnown RBP16.8■□□□□ 0.28
CPSF2-203ENST00000554290 MTERF4Q7Z6M4 381 aaKnown RBP16.8■□□□□ 0.28
CPSF2-203ENST00000554290 TRABD2AQ86V40 505 aa16.8■□□□□ 0.28
CPSF2-203ENST00000554290 RIBC1Q8N443 379 aaPredicted RBP16.8■□□□□ 0.28
CPSF2-203ENST00000554290 NATD1Q8N6N6 113 aa16.8■□□□□ 0.28
CPSF2-203ENST00000554290 ZNF527Q8NB42 609 aa16.8■□□□□ 0.28
CPSF2-203ENST00000554290 OSTF1Q92882 214 aa16.8■□□□□ 0.28
CPSF2-203ENST00000554290 OTUB1Q96FW1 271 aaPredicted RBP16.8■□□□□ 0.28
CPSF2-203ENST00000554290 REXO5Q96IC2 774 aaKnown RBP16.8■□□□□ 0.28
CPSF2-203ENST00000554290 NPAS1Q99742 590 aa16.8■□□□□ 0.28
CPSF2-203ENST00000554290 HOXD1Q9GZZ0 328 aa16.8■□□□□ 0.28
CPSF2-203ENST00000554290 PIGUQ9H490 435 aa16.8■□□□□ 0.28
CPSF2-203ENST00000554290 SIRT3Q9NTG7 399 aaPredicted RBP16.8■□□□□ 0.28
CPSF2-203ENST00000554290 SNX8Q9Y5X2 465 aa16.8■□□□□ 0.28
CPSF2-203ENST00000554290 A0A0J9YW62 118 aa16.79■□□□□ 0.28
CPSF2-203ENST00000554290 H3BNH8 94 aa16.79■□□□□ 0.28
CPSF2-203ENST00000554290 PEX11AO75192 247 aa16.79■□□□□ 0.28
CPSF2-203ENST00000554290 TUBBP07437 444 aa16.79■□□□□ 0.28
CPSF2-203ENST00000554290 KRT16P08779 473 aa16.79■□□□□ 0.28
CPSF2-203ENST00000554290 PABPC4LP0CB38 370 aaKnown RBP16.79■□□□□ 0.28
CPSF2-203ENST00000554290 CCT3P49368 545 aaKnown RBP16.79■□□□□ 0.28
CPSF2-203ENST00000554290 CARD18P57730 90 aa16.79■□□□□ 0.28
CPSF2-203ENST00000554290 LASP1Q14847 261 aaKnown RBP16.79■□□□□ 0.28
CPSF2-203ENST00000554290 LSM12Q3MHD2 195 aaKnown RBP16.79■□□□□ 0.28
CPSF2-203ENST00000554290 BEX5Q5H9J7 111 aa16.79■□□□□ 0.28
CPSF2-203ENST00000554290 PRSS57Q6UWY2 283 aa16.79■□□□□ 0.28
CPSF2-203ENST00000554290 CLEC9AQ6UXN8 241 aa16.79■□□□□ 0.28
CPSF2-203ENST00000554290 STAC2Q6ZMT1 411 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms