RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 ALKBH2Q6NS38 261 aa8.03□□□□□ -1.12
TDP1-208ENST00000553989 SLC30A6Q6NXT4 461 aa8.03□□□□□ -1.12
TDP1-208ENST00000553989 SCIMPQ6UWF3 145 aa8.03□□□□□ -1.12
TDP1-208ENST00000553989 PLXDC2Q6UX71 529 aa8.03□□□□□ -1.12
TDP1-208ENST00000553989 LIAT1Q6ZQX7 453 aa8.03□□□□□ -1.12
TDP1-208ENST00000553989 FKBP9P1Q75LS8 142 aa8.03□□□□□ -1.12
TDP1-208ENST00000553989 CHMP1BQ7LBR1 199 aa8.03□□□□□ -1.12
TDP1-208ENST00000553989 P4HA3Q7Z4N8 544 aa8.03□□□□□ -1.12
TDP1-208ENST00000553989 IFNEQ86WN2 208 aa8.03□□□□□ -1.12
TDP1-208ENST00000553989 GRAMD2AQ8IUY3 354 aa8.03□□□□□ -1.12
TDP1-208ENST00000553989 AQP12AQ8IXF9 295 aa8.03□□□□□ -1.12
TDP1-208ENST00000553989 ZNF615Q8N8J6 731 aa8.03□□□□□ -1.12
TDP1-208ENST00000553989 C17orf47Q8NEP4 570 aa8.03□□□□□ -1.12
TDP1-208ENST00000553989 BHLHE22Q8NFJ8 381 aaPredicted RBP8.03□□□□□ -1.12
TDP1-208ENST00000553989 WDR20Q8TBZ3 569 aa8.03□□□□□ -1.12
TDP1-208ENST00000553989 ZPLD1Q8TCW7 415 aa8.03□□□□□ -1.12
TDP1-208ENST00000553989 POP5Q969H6 163 aaKnown RBP8.03□□□□□ -1.12
TDP1-208ENST00000553989 GFM2Q969S9 779 aaKnown RBP8.03□□□□□ -1.12
TDP1-208ENST00000553989 SFXN2Q96NB2 322 aa8.03□□□□□ -1.12
TDP1-208ENST00000553989 ZFP3Q96NJ6 502 aa8.03□□□□□ -1.12
TDP1-208ENST00000553989 DACH2Q96NX9 599 aa8.03□□□□□ -1.12
TDP1-208ENST00000553989 NODALQ96S42 347 aa8.03□□□□□ -1.12
TDP1-208ENST00000553989 TUBA1CQ9BQE3 449 aa8.03□□□□□ -1.12
TDP1-208ENST00000553989 ELOVL6Q9H5J4 265 aa8.03□□□□□ -1.12
TDP1-208ENST00000553989 ZNF696Q9H7X3 374 aa8.03□□□□□ -1.12
TDP1-208ENST00000553989 NOL11Q9H8H0 719 aaKnown RBP8.03□□□□□ -1.12
TDP1-208ENST00000553989 SPAG4Q9NPE6 437 aa8.03□□□□□ -1.12
TDP1-208ENST00000553989 ARMC1Q9NVT9 282 aa8.03□□□□□ -1.12
TDP1-208ENST00000553989 BEX4Q9NWD9 120 aaPredicted RBP8.03□□□□□ -1.12
TDP1-208ENST00000553989 TMEM181Q9P2C4 612 aa8.03□□□□□ -1.12
TDP1-208ENST00000553989 CD300AQ9UGN4 299 aa8.03□□□□□ -1.12
TDP1-208ENST00000553989 NDRG3Q9UGV2 375 aa8.03□□□□□ -1.12
TDP1-208ENST00000553989 DKKL1Q9UK85 242 aa8.03□□□□□ -1.12
TDP1-208ENST00000553989 DTX4Q9Y2E6 619 aa8.03□□□□□ -1.12
TDP1-208ENST00000553989 ABCA2Q9BZC7 2435 aa8.02□□□□□ -1.13
TDP1-208ENST00000553989 FREM3P0C091 2139 aa8.02□□□□□ -1.13
TDP1-208ENST00000553989 A8MT66 165 aa8.02□□□□□ -1.13
TDP1-208ENST00000553989 FAM171A2A8MVW0 826 aa8.02□□□□□ -1.13
TDP1-208ENST00000553989 SMPD2O60906 423 aa8.02□□□□□ -1.13
TDP1-208ENST00000553989 ICOSLGO75144 302 aa8.02□□□□□ -1.13
TDP1-208ENST00000553989 CBR3O75828 277 aa8.02□□□□□ -1.13
TDP1-208ENST00000553989 ESRRBO95718 433 aa8.02□□□□□ -1.13
TDP1-208ENST00000553989 UMPSP11172 480 aa8.02□□□□□ -1.13
TDP1-208ENST00000553989 BMP2P12643 396 aa8.02□□□□□ -1.13
TDP1-208ENST00000553989 NAGAP17050 411 aa8.02□□□□□ -1.13
TDP1-208ENST00000553989 LBPP18428 481 aa8.02□□□□□ -1.13
TDP1-208ENST00000553989 CD53P19397 219 aa8.02□□□□□ -1.13
TDP1-208ENST00000553989 PEX2P28328 305 aa8.02□□□□□ -1.13
TDP1-208ENST00000553989 HOXC12P31275 282 aa8.02□□□□□ -1.13
TDP1-208ENST00000553989 KRT20P35900 424 aa8.02□□□□□ -1.13
TDP1-208ENST00000553989 FEN1P39748 380 aaKnown RBP8.02□□□□□ -1.13
TDP1-208ENST00000553989 STARP49675 285 aa8.02□□□□□ -1.13
TDP1-208ENST00000553989 BNIP2Q12982 314 aa8.02□□□□□ -1.13
TDP1-208ENST00000553989 PDCD2Q16342 344 aaPredicted RBP8.02□□□□□ -1.13
TDP1-208ENST00000553989 LRRC36Q1X8D7 754 aa8.02□□□□□ -1.13
TDP1-208ENST00000553989 Q5PR19 223 aa8.02□□□□□ -1.13
TDP1-208ENST00000553989 ZNF678Q5SXM1 525 aa8.02□□□□□ -1.13
TDP1-208ENST00000553989 SHEQ5VZ18 495 aa8.02□□□□□ -1.13
TDP1-208ENST00000553989 FRG2Q64ET8 278 aa8.02□□□□□ -1.13
TDP1-208ENST00000553989 FAM111BQ6SJ93 734 aa8.02□□□□□ -1.13
TDP1-208ENST00000553989 LARP4Q71RC2 724 aaKnown RBP eCLIP8.02□□□□□ -1.13
TDP1-208ENST00000553989 NUP54Q7Z3B4 507 aa8.02□□□□□ -1.13
TDP1-208ENST00000553989 DHFR2Q86XF0 187 aa8.02□□□□□ -1.13
TDP1-208ENST00000553989 PTGR2Q8N8N7 351 aaPredicted RBP8.02□□□□□ -1.13
TDP1-208ENST00000553989 ANKFN1Q8N957 763 aa8.02□□□□□ -1.13
TDP1-208ENST00000553989 CNEP1R1Q8N9A8 125 aa8.02□□□□□ -1.13
TDP1-208ENST00000553989 L3MBTL4Q8NA19 623 aa8.02□□□□□ -1.13
TDP1-208ENST00000553989 OR52B6Q8NGF0 335 aa8.02□□□□□ -1.13
TDP1-208ENST00000553989 OR52R1Q8NGF1 315 aa8.02□□□□□ -1.13
TDP1-208ENST00000553989 AGR3Q8TD06 166 aa8.02□□□□□ -1.13
TDP1-208ENST00000553989 TMCO6Q96DC7 493 aa8.02□□□□□ -1.13
TDP1-208ENST00000553989 PHF21BQ96EK2 531 aa8.02□□□□□ -1.13
TDP1-208ENST00000553989 LCORQ96JN0 433 aaPredicted RBP8.02□□□□□ -1.13
TDP1-208ENST00000553989 FRG2BQ96QU4 278 aa8.02□□□□□ -1.13
TDP1-208ENST00000553989 CITED4Q96RK1 184 aa8.02□□□□□ -1.13
TDP1-208ENST00000553989 YTHDF1Q9BYJ9 559 aaKnown RBP8.02□□□□□ -1.13
TDP1-208ENST00000553989 SAP130Q9H0E3 1048 aa8.02□□□□□ -1.13
TDP1-208ENST00000553989 PIGMQ9H3S5 423 aa8.02□□□□□ -1.13
TDP1-208ENST00000553989 TAS2R10Q9NYW0 307 aa8.02□□□□□ -1.13
TDP1-208ENST00000553989 JKAMPQ9P055 326 aa8.02□□□□□ -1.13
TDP1-208ENST00000553989 PRODH2Q9UF12 536 aa8.02□□□□□ -1.13
TDP1-208ENST00000553989 RIMS3Q9UJD0 308 aa8.02□□□□□ -1.13
TDP1-208ENST00000553989 PACSIN3Q9UKS6 424 aa8.02□□□□□ -1.13
TDP1-208ENST00000553989 PSME2Q9UL46 239 aa8.02□□□□□ -1.13
TDP1-208ENST00000553989 KIAA1549Q9HCM3 1950 aa8.02□□□□□ -1.13
TDP1-208ENST00000553989 MPDZO75970 2070 aa8.01□□□□□ -1.13
TDP1-208ENST00000553989 TCRBV3S1A0A5B6 114 aa8.01□□□□□ -1.13
TDP1-208ENST00000553989 C1orf226A1L170 272 aa8.01□□□□□ -1.13
TDP1-208ENST00000553989 MRASO14807 208 aa8.01□□□□□ -1.13
TDP1-208ENST00000553989 AZIN1O14977 448 aa8.01□□□□□ -1.13
TDP1-208ENST00000553989 SMAD7O15105 426 aaKnown RBP8.01□□□□□ -1.13
TDP1-208ENST00000553989 ACOX3O15254 700 aa8.01□□□□□ -1.13
TDP1-208ENST00000553989 UGT2B11O75310 529 aa8.01□□□□□ -1.13
TDP1-208ENST00000553989 REM1O75628 298 aa8.01□□□□□ -1.13
TDP1-208ENST00000553989 SUPT7LO94864 414 aa8.01□□□□□ -1.13
TDP1-208ENST00000553989 RCBTB2O95199 551 aa8.01□□□□□ -1.13
TDP1-208ENST00000553989 CHEK2O96017 543 aa8.01□□□□□ -1.13
TDP1-208ENST00000553989 ATP1B1P05026 303 aa8.01□□□□□ -1.13
TDP1-208ENST00000553989 FCGR1AP12314 374 aa8.01□□□□□ -1.13
TDP1-208ENST00000553989 CPN1P15169 458 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms