RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 ENPP6Q6UWR7 440 aa13.3□□□□□ -0.28
SHMT2-210ENST00000553950 OLIG3Q7RTU3 272 aa13.3□□□□□ -0.28
SHMT2-210ENST00000553950 FAM71CQ8NEG0 241 aa13.3□□□□□ -0.28
SHMT2-210ENST00000553950 OR5M3Q8NGP4 307 aa13.3□□□□□ -0.28
SHMT2-210ENST00000553950 OR4C3Q8NH37 302 aa13.3□□□□□ -0.28
SHMT2-210ENST00000553950 PHOSPHO1Q8TCT1 267 aa13.3□□□□□ -0.28
SHMT2-210ENST00000553950 ZNF347Q96SE7 839 aa13.3□□□□□ -0.28
SHMT2-210ENST00000553950 ARHGDIGQ99819 225 aa13.3□□□□□ -0.28
SHMT2-210ENST00000553950 CPNE5Q9HCH3 593 aa13.3□□□□□ -0.28
SHMT2-210ENST00000553950 SACM1LQ9NTJ5 587 aa13.3□□□□□ -0.28
SHMT2-210ENST00000553950 CCM2LQ9NUG4 571 aaPredicted RBP13.3□□□□□ -0.28
SHMT2-210ENST00000553950 ARMC1Q9NVT9 282 aa13.3□□□□□ -0.28
SHMT2-210ENST00000553950 LRFN1Q9P244 771 aa13.3□□□□□ -0.28
SHMT2-210ENST00000553950 CHCHD2Q9Y6H1 151 aaPredicted RBP13.3□□□□□ -0.28
SHMT2-210ENST00000553950 V9GYQ6 96 aa13.3□□□□□ -0.28
SHMT2-210ENST00000553950 AKAP13Q12802 2813 aa13.29□□□□□ -0.28
SHMT2-210ENST00000553950 NCOR2Q9Y618 2525 aa13.29□□□□□ -0.28
SHMT2-210ENST00000553950 A6NL46 340 aa13.29□□□□□ -0.28
SHMT2-210ENST00000553950 MASP2O00187 686 aa13.29□□□□□ -0.28
SHMT2-210ENST00000553950 AP3D1O14617 1153 aa13.29□□□□□ -0.28
SHMT2-210ENST00000553950 HNRNPRO43390 633 aaKnown RBP13.29□□□□□ -0.28
SHMT2-210ENST00000553950 ZNF354AO60765 605 aaPredicted RBP13.29□□□□□ -0.28
SHMT2-210ENST00000553950 ENTPD5O75356 428 aa13.29□□□□□ -0.28
SHMT2-210ENST00000553950 ANGPTL1O95841 491 aa13.29□□□□□ -0.28
SHMT2-210ENST00000553950 MSX1P28360 303 aa13.29□□□□□ -0.28
SHMT2-210ENST00000553950 MAGEA2P43356 314 aa13.29□□□□□ -0.28
SHMT2-210ENST00000553950 ARG2P78540 354 aa13.29□□□□□ -0.28
SHMT2-210ENST00000553950 FOXK2Q01167 660 aa13.29□□□□□ -0.28
SHMT2-210ENST00000553950 TUBA3CQ13748 450 aa13.29□□□□□ -0.28
SHMT2-210ENST00000553950 MAPK14Q16539 360 aa13.29□□□□□ -0.28
SHMT2-210ENST00000553950 DUSP7Q16829 419 aa13.29□□□□□ -0.28
SHMT2-210ENST00000553950 FNDC7Q5VTL7 733 aa13.29□□□□□ -0.28
SHMT2-210ENST00000553950 TUBA3EQ6PEY2 450 aa13.29□□□□□ -0.28
SHMT2-210ENST00000553950 IGFL2Q6UWQ7 119 aa13.29□□□□□ -0.28
SHMT2-210ENST00000553950 VTCN1Q7Z7D3 282 aa13.29□□□□□ -0.28
SHMT2-210ENST00000553950 CARM1Q86X55 608 aa13.29□□□□□ -0.28
SHMT2-210ENST00000553950 ZDHHC21Q8IVQ6 265 aa13.29□□□□□ -0.28
SHMT2-210ENST00000553950 TMCO5AQ8N6Q1 288 aa13.29□□□□□ -0.28
SHMT2-210ENST00000553950 PAPD5Q8NDF8 572 aaKnown RBP13.29□□□□□ -0.28
SHMT2-210ENST00000553950 PSD4Q8NDX1 1056 aa13.29□□□□□ -0.28
SHMT2-210ENST00000553950 FDCSPQ8NFU4 85 aa13.29□□□□□ -0.28
SHMT2-210ENST00000553950 GPR32P1Q8NGA4 272 aa13.29□□□□□ -0.28
SHMT2-210ENST00000553950 GRHL3Q8TE85 626 aa13.29□□□□□ -0.28
SHMT2-210ENST00000553950 CANT1Q8WVQ1 401 aa13.29□□□□□ -0.28
SHMT2-210ENST00000553950 ZNF597Q96LX8 424 aa13.29□□□□□ -0.28
SHMT2-210ENST00000553950 C5orf34Q96MH7 638 aa13.29□□□□□ -0.28
SHMT2-210ENST00000553950 SEPHS2Q99611 448 aa13.29□□□□□ -0.28
SHMT2-210ENST00000553950 SMAD5Q99717 465 aaKnown RBP13.29□□□□□ -0.28
SHMT2-210ENST00000553950 ZNF552Q9H707 407 aaPredicted RBP13.29□□□□□ -0.28
SHMT2-210ENST00000553950 SH2D2AQ9NP31 389 aa13.29□□□□□ -0.28
SHMT2-210ENST00000553950 IL1RAPQ9NPH3 570 aa13.29□□□□□ -0.28
SHMT2-210ENST00000553950 PPP4R1LQ9P1A2 415 aa13.29□□□□□ -0.28
SHMT2-210ENST00000553950 KCNE5Q9UJ90 142 aa13.29□□□□□ -0.28
SHMT2-210ENST00000553950 KLF13Q9Y2Y9 288 aaPredicted RBP13.29□□□□□ -0.28
SHMT2-210ENST00000553950 SH3GLB1Q9Y371 365 aa13.29□□□□□ -0.28
SHMT2-210ENST00000553950 FAM32AQ9Y421 112 aaKnown RBP13.29□□□□□ -0.28
SHMT2-210ENST00000553950 AP4S1Q9Y587 144 aa13.29□□□□□ -0.28
SHMT2-210ENST00000553950 CENPVL1A0A0U1RR11 272 aa13.28□□□□□ -0.28
SHMT2-210ENST00000553950 FAM47E-STBD1D6RA91 191 aa13.28□□□□□ -0.28
SHMT2-210ENST00000553950 FAAHO00519 579 aa13.28□□□□□ -0.28
SHMT2-210ENST00000553950 ADAMDEC1O15204 470 aa13.28□□□□□ -0.28
SHMT2-210ENST00000553950 SCO2O43819 266 aa13.28□□□□□ -0.28
SHMT2-210ENST00000553950 MAN1A2O60476 641 aa13.28□□□□□ -0.28
SHMT2-210ENST00000553950 DEAF1O75398 565 aaPredicted RBP13.28□□□□□ -0.28
SHMT2-210ENST00000553950 SLC25A12O75746 678 aa13.28□□□□□ -0.28
SHMT2-210ENST00000553950 SEMG1P04279 462 aa13.28□□□□□ -0.28
SHMT2-210ENST00000553950 UBTFL6P0CB48 400 aaPredicted RBP13.28□□□□□ -0.28
SHMT2-210ENST00000553950 CD46P15529 392 aa13.28□□□□□ -0.28
SHMT2-210ENST00000553950 ELAVL4P26378 380 aaKnown RBP13.28□□□□□ -0.28
SHMT2-210ENST00000553950 CASP3P42574 277 aa13.28□□□□□ -0.28
SHMT2-210ENST00000553950 OR1C1Q15619 314 aa13.28□□□□□ -0.28
SHMT2-210ENST00000553950 LINC00696Q6ZRV3 163 aa13.28□□□□□ -0.28
SHMT2-210ENST00000553950 PIWIL3Q7Z3Z3 882 aaKnown RBP13.28□□□□□ -0.28
SHMT2-210ENST00000553950 PACS2Q86VP3 889 aa13.28□□□□□ -0.28
SHMT2-210ENST00000553950 KDF1Q8NAX2 398 aaPredicted RBP13.28□□□□□ -0.28
SHMT2-210ENST00000553950 TMEM178AQ8NBL3 297 aa13.28□□□□□ -0.28
SHMT2-210ENST00000553950 HAS2Q92819 552 aa13.28□□□□□ -0.28
SHMT2-210ENST00000553950 TMEM41AQ96HV5 264 aa13.28□□□□□ -0.28
SHMT2-210ENST00000553950 PRRC1Q96M27 445 aa13.28□□□□□ -0.28
SHMT2-210ENST00000553950 NODALQ96S42 347 aa13.28□□□□□ -0.28
SHMT2-210ENST00000553950 ANGPTL4Q9BY76 406 aa13.28□□□□□ -0.28
SHMT2-210ENST00000553950 LAT2Q9GZY6 243 aa13.28□□□□□ -0.28
SHMT2-210ENST00000553950 DCLRE1BQ9H816 532 aa13.28□□□□□ -0.28
SHMT2-210ENST00000553950 DNAJB12Q9NXW2 375 aaKnown RBP13.28□□□□□ -0.28
SHMT2-210ENST00000553950 CNOT11Q9UKZ1 510 aaKnown RBP13.28□□□□□ -0.28
SHMT2-210ENST00000553950 BOKQ9UMX3 212 aaPredicted RBP13.28□□□□□ -0.28
SHMT2-210ENST00000553950 EML6Q6ZMW3 1958 aa13.28□□□□□ -0.28
SHMT2-210ENST00000553950 PTPRQQ9UMZ3 2332 aa13.28□□□□□ -0.28
SHMT2-210ENST00000553950 HEATR5AQ86XA9 2040 aa13.27□□□□□ -0.28
SHMT2-210ENST00000553950 IGLV3-32A0A0A0MS00 114 aa13.27□□□□□ -0.29
SHMT2-210ENST00000553950 HCRTR2O43614 444 aa13.27□□□□□ -0.29
SHMT2-210ENST00000553950 WDPCPO95876 746 aa13.27□□□□□ -0.29
SHMT2-210ENST00000553950 RHCEP18577 417 aa13.27□□□□□ -0.29
SHMT2-210ENST00000553950 PGCP20142 388 aa13.27□□□□□ -0.29
SHMT2-210ENST00000553950 FASP25445 335 aa13.27□□□□□ -0.29
SHMT2-210ENST00000553950 MASP1P48740 699 aa13.27□□□□□ -0.29
SHMT2-210ENST00000553950 P2RX1P51575 399 aa13.27□□□□□ -0.29
SHMT2-210ENST00000553950 SMIM11AP58511 58 aa13.27□□□□□ -0.29
SHMT2-210ENST00000553950 COPZ1P61923 177 aa13.27□□□□□ -0.29
SHMT2-210ENST00000553950 SKP2Q13309 424 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms