RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 CRYBA2P53672 197 aa13.31□□□□□ -0.28
SHMT2-208ENST00000553868 SLC26A5P58743 744 aa13.31□□□□□ -0.28
SHMT2-208ENST00000553868 CHRNEQ04844 493 aa13.31□□□□□ -0.28
SHMT2-208ENST00000553868 SSPNQ14714 243 aa13.31□□□□□ -0.28
SHMT2-208ENST00000553868 EBPQ15125 230 aaKnown RBP13.31□□□□□ -0.28
SHMT2-208ENST00000553868 ATP6AP1Q15904 470 aa13.31□□□□□ -0.28
SHMT2-208ENST00000553868 EXT1Q16394 746 aa13.31□□□□□ -0.28
SHMT2-208ENST00000553868 ZSWIM7Q19AV6 140 aa13.31□□□□□ -0.28
SHMT2-208ENST00000553868 EIPR1Q53HC9 387 aa13.31□□□□□ -0.28
SHMT2-208ENST00000553868 HSDL2Q6YN16 418 aa13.31□□□□□ -0.28
SHMT2-208ENST00000553868 FRRS1Q6ZNA5 592 aa13.31□□□□□ -0.28
SHMT2-208ENST00000553868 ZDHHC21Q8IVQ6 265 aa13.31□□□□□ -0.28
SHMT2-208ENST00000553868 NFAM1Q8NET5 270 aaPredicted RBP13.31□□□□□ -0.28
SHMT2-208ENST00000553868 OR5L2Q8NGL0 311 aa13.31□□□□□ -0.28
SHMT2-208ENST00000553868 LRTOMTQ8WZ04 291 aa13.31□□□□□ -0.28
SHMT2-208ENST00000553868 TP53INP1Q96A56 240 aa13.31□□□□□ -0.28
SHMT2-208ENST00000553868 CENPNQ96H22 339 aaPredicted RBP13.31□□□□□ -0.28
SHMT2-208ENST00000553868 GAL3ST4Q96RP7 486 aa13.31□□□□□ -0.28
SHMT2-208ENST00000553868 PKP2Q99959 881 aa13.31□□□□□ -0.28
SHMT2-208ENST00000553868 REPIN1Q9BWE0 567 aaKnown RBP13.31□□□□□ -0.28
SHMT2-208ENST00000553868 PINK1Q9BXM7 581 aa13.31□□□□□ -0.28
SHMT2-208ENST00000553868 WWTR1Q9GZV5 400 aa13.31□□□□□ -0.28
SHMT2-208ENST00000553868 SAP130Q9H0E3 1048 aa13.31□□□□□ -0.28
SHMT2-208ENST00000553868 ZNF700Q9H0M5 742 aa13.31□□□□□ -0.28
SHMT2-208ENST00000553868 EVA1AQ9H8M9 152 aa13.31□□□□□ -0.28
SHMT2-208ENST00000553868 IL1RAPQ9NPH3 570 aa13.31□□□□□ -0.28
SHMT2-208ENST00000553868 RYDENQ9NUL5 291 aaKnown RBP13.31□□□□□ -0.28
SHMT2-208ENST00000553868 KLHL28Q9NXS3 571 aa13.31□□□□□ -0.28
SHMT2-208ENST00000553868 GPR83Q9NYM4 423 aa13.31□□□□□ -0.28
SHMT2-208ENST00000553868 RIMS3Q9UJD0 308 aa13.31□□□□□ -0.28
SHMT2-208ENST00000553868 B3GNT3Q9Y2A9 372 aa13.31□□□□□ -0.28
SHMT2-208ENST00000553868 SLC9A8Q9Y2E8 581 aa13.31□□□□□ -0.28
SHMT2-208ENST00000553868 IGHV3-20A0A0C4DH32 117 aa13.3□□□□□ -0.28
SHMT2-208ENST00000553868 A0A1W2PQ72 361 aa13.3□□□□□ -0.28
SHMT2-208ENST00000553868 GXYLT2A0PJZ3 443 aa13.3□□□□□ -0.28
SHMT2-208ENST00000553868 SYT5O00445 386 aa13.3□□□□□ -0.28
SHMT2-208ENST00000553868 CASQ2O14958 399 aaPredicted RBP13.3□□□□□ -0.28
SHMT2-208ENST00000553868 CLOCKO15516 846 aa13.3□□□□□ -0.28
SHMT2-208ENST00000553868 SEC24DO94855 1032 aaPredicted RBP13.3□□□□□ -0.28
SHMT2-208ENST00000553868 IFNW1P05000 195 aa13.3□□□□□ -0.28
SHMT2-208ENST00000553868 PABPC4LP0CB38 370 aaKnown RBP13.3□□□□□ -0.28
SHMT2-208ENST00000553868 CT45A8P0DMV1 189 aa13.3□□□□□ -0.28
SHMT2-208ENST00000553868 CT45A9P0DMV2 189 aa13.3□□□□□ -0.28
SHMT2-208ENST00000553868 CD247P20963 164 aa13.3□□□□□ -0.28
SHMT2-208ENST00000553868 PRKAR1BP31321 381 aa13.3□□□□□ -0.28
SHMT2-208ENST00000553868 MAGEA2P43356 314 aa13.3□□□□□ -0.28
SHMT2-208ENST00000553868 FOXL2P58012 376 aa13.3□□□□□ -0.28
SHMT2-208ENST00000553868 TRIP10Q15642 601 aa13.3□□□□□ -0.28
SHMT2-208ENST00000553868 GPR68Q15743 365 aa13.3□□□□□ -0.28
SHMT2-208ENST00000553868 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.3□□□□□ -0.28
SHMT2-208ENST00000553868 FLYWCH1Q4VC44 716 aa13.3□□□□□ -0.28
SHMT2-208ENST00000553868 LIN52Q52LA3 116 aa13.3□□□□□ -0.28
SHMT2-208ENST00000553868 CT45A2Q5DJT8 189 aa13.3□□□□□ -0.28
SHMT2-208ENST00000553868 ZNF311Q5JNZ3 666 aa13.3□□□□□ -0.28
SHMT2-208ENST00000553868 AP1ARQ63HQ0 302 aa13.3□□□□□ -0.28
SHMT2-208ENST00000553868 TYW3Q6IPR3 259 aaKnown RBP13.3□□□□□ -0.28
SHMT2-208ENST00000553868 FIGNL1Q6PIW4 674 aa13.3□□□□□ -0.28
SHMT2-208ENST00000553868 DHRS4L2Q6PKH6 230 aa13.3□□□□□ -0.28
SHMT2-208ENST00000553868 NPSR1Q6W5P4 371 aa13.3□□□□□ -0.28
SHMT2-208ENST00000553868 PIWIL3Q7Z3Z3 882 aaKnown RBP13.3□□□□□ -0.28
SHMT2-208ENST00000553868 VTCN1Q7Z7D3 282 aa13.3□□□□□ -0.28
SHMT2-208ENST00000553868 ZNF321PQ8N8H1 164 aa13.3□□□□□ -0.28
SHMT2-208ENST00000553868 SMYD1Q8NB12 490 aa13.3□□□□□ -0.28
SHMT2-208ENST00000553868 OR52P1PQ8NH57 321 aa13.3□□□□□ -0.28
SHMT2-208ENST00000553868 NUBPLQ8TB37 319 aa13.3□□□□□ -0.28
SHMT2-208ENST00000553868 FAM110BQ8TC76 370 aa13.3□□□□□ -0.28
SHMT2-208ENST00000553868 HSPBAP1Q96EW2 488 aa13.3□□□□□ -0.28
SHMT2-208ENST00000553868 ZNF354BQ96LW1 612 aa13.3□□□□□ -0.28
SHMT2-208ENST00000553868 ZNF347Q96SE7 839 aa13.3□□□□□ -0.28
SHMT2-208ENST00000553868 SMAD5Q99717 465 aaKnown RBP13.3□□□□□ -0.28
SHMT2-208ENST00000553868 WDR77Q9BQA1 342 aaPredicted RBP13.3□□□□□ -0.28
SHMT2-208ENST00000553868 HOXD1Q9GZZ0 328 aa13.3□□□□□ -0.28
SHMT2-208ENST00000553868 VCXQ9H320 206 aa13.3□□□□□ -0.28
SHMT2-208ENST00000553868 AGPAT4Q9NRZ5 378 aa13.3□□□□□ -0.28
SHMT2-208ENST00000553868 DNAJB9Q9UBS3 223 aa13.3□□□□□ -0.28
SHMT2-208ENST00000553868 DTX4Q9Y2E6 619 aa13.3□□□□□ -0.28
SHMT2-208ENST00000553868 FAM32AQ9Y421 112 aaKnown RBP13.3□□□□□ -0.28
SHMT2-208ENST00000553868 SCN2AQ99250 2005 aa13.3□□□□□ -0.28
SHMT2-208ENST00000553868 FER1L5A0AVI2 2057 aa13.3□□□□□ -0.28
SHMT2-208ENST00000553868 AGAP5A6NIR3 686 aa13.29□□□□□ -0.28
SHMT2-208ENST00000553868 GNGT2O14610 69 aa13.29□□□□□ -0.28
SHMT2-208ENST00000553868 TO15178 435 aa13.29□□□□□ -0.28
SHMT2-208ENST00000553868 FCMRO60667 390 aa13.29□□□□□ -0.28
SHMT2-208ENST00000553868 ZFAND5O76080 213 aa13.29□□□□□ -0.28
SHMT2-208ENST00000553868 CST1P01037 141 aa13.29□□□□□ -0.28
SHMT2-208ENST00000553868 SEMG1P04279 462 aa13.29□□□□□ -0.28
SHMT2-208ENST00000553868 FESP07332 822 aa13.29□□□□□ -0.28
SHMT2-208ENST00000553868 IL7RP16871 459 aa13.29□□□□□ -0.28
SHMT2-208ENST00000553868 VHLP40337 213 aa13.29□□□□□ -0.28
SHMT2-208ENST00000553868 PTDSS1P48651 473 aaKnown RBP13.29□□□□□ -0.28
SHMT2-208ENST00000553868 GPR143P51810 404 aa13.29□□□□□ -0.28
SHMT2-208ENST00000553868 NRG3P56975 720 aa13.29□□□□□ -0.28
SHMT2-208ENST00000553868 RNF4P78317 190 aa13.29□□□□□ -0.28
SHMT2-208ENST00000553868 KCNJ10P78508 379 aa13.29□□□□□ -0.28
SHMT2-208ENST00000553868 PCOLCEQ15113 449 aa13.29□□□□□ -0.28
SHMT2-208ENST00000553868 CCNJQ5T5M9 372 aa13.29□□□□□ -0.28
SHMT2-208ENST00000553868 CYP4Z1Q86W10 505 aa13.29□□□□□ -0.28
SHMT2-208ENST00000553868 RAB43Q86YS6 212 aa13.29□□□□□ -0.28
SHMT2-208ENST00000553868 C9orf40Q8IXQ3 194 aa13.29□□□□□ -0.28
SHMT2-208ENST00000553868 TAGAPQ8N103 731 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms