RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 PRR5P85299 388 aa12.13□□□□□ -0.47
PRPF39-204ENST00000553605 CHRNEQ04844 493 aa12.13□□□□□ -0.47
PRPF39-204ENST00000553605 ZNF155Q12901 538 aaPredicted RBP12.13□□□□□ -0.47
PRPF39-204ENST00000553605 SCGB2A2Q13296 93 aa12.13□□□□□ -0.47
PRPF39-204ENST00000553605 ZSWIM7Q19AV6 140 aa12.13□□□□□ -0.47
PRPF39-204ENST00000553605 SWI5Q1ZZU3 235 aa12.13□□□□□ -0.47
PRPF39-204ENST00000553605 MST1LQ2TV78 715 aa12.13□□□□□ -0.47
PRPF39-204ENST00000553605 TCHHL1Q5QJ38 904 aaPredicted RBP12.13□□□□□ -0.47
PRPF39-204ENST00000553605 APOOLQ6UXV4 268 aa12.13□□□□□ -0.47
PRPF39-204ENST00000553605 TRABD2AQ86V40 505 aa12.13□□□□□ -0.47
PRPF39-204ENST00000553605 ANKMY2Q8IV38 441 aa12.13□□□□□ -0.47
PRPF39-204ENST00000553605 PIP4P2Q8N4L2 257 aa12.13□□□□□ -0.47
PRPF39-204ENST00000553605 CDYL2Q8N8U2 506 aa12.13□□□□□ -0.47
PRPF39-204ENST00000553605 FBXO17Q96EF6 278 aa12.13□□□□□ -0.47
PRPF39-204ENST00000553605 MRTO4Q9UKD2 239 aaKnown RBP12.13□□□□□ -0.47
PRPF39-204ENST00000553605 A0A1W2PRB8 838 aa12.12□□□□□ -0.47
PRPF39-204ENST00000553605 PLOD3O60568 738 aa12.12□□□□□ -0.47
PRPF39-204ENST00000553605 UTS2O95399 124 aa12.12□□□□□ -0.47
PRPF39-204ENST00000553605 LTA4HP09960 611 aaKnown RBP12.12□□□□□ -0.47
PRPF39-204ENST00000553605 MTHFD2P13995 350 aa12.12□□□□□ -0.47
PRPF39-204ENST00000553605 SHC1P29353 583 aa12.12□□□□□ -0.47
PRPF39-204ENST00000553605 RFX3P48380 749 aa12.12□□□□□ -0.47
PRPF39-204ENST00000553605 ZNF41P51814 821 aaPredicted RBP12.12□□□□□ -0.47
PRPF39-204ENST00000553605 PSMD4P55036 377 aaKnown RBP12.12□□□□□ -0.47
PRPF39-204ENST00000553605 MANFP55145 182 aaKnown RBP12.12□□□□□ -0.47
PRPF39-204ENST00000553605 CDH15P55291 814 aa12.12□□□□□ -0.47
PRPF39-204ENST00000553605 HILS1P60008 231 aa12.12□□□□□ -0.47
PRPF39-204ENST00000553605 RAB10P61026 200 aa12.12□□□□□ -0.47
PRPF39-204ENST00000553605 GTF2H2Q13888 395 aa12.12□□□□□ -0.47
PRPF39-204ENST00000553605 PLPPR5Q32ZL2 321 aa12.12□□□□□ -0.47
PRPF39-204ENST00000553605 ARL13AQ5H913 290 aaPredicted RBP12.12□□□□□ -0.47
PRPF39-204ENST00000553605 FRG2Q64ET8 278 aa12.12□□□□□ -0.47
PRPF39-204ENST00000553605 GTF2H2CQ6P1K8 395 aa12.12□□□□□ -0.47
PRPF39-204ENST00000553605 GOLGA7Q7Z5G4 137 aa12.12□□□□□ -0.47
PRPF39-204ENST00000553605 SLC43A2Q8N370 569 aa12.12□□□□□ -0.47
PRPF39-204ENST00000553605 ZNF433Q8N7K0 673 aaPredicted RBP12.12□□□□□ -0.47
PRPF39-204ENST00000553605 OR7G2Q8NG99 324 aa12.12□□□□□ -0.47
PRPF39-204ENST00000553605 MS4A14Q96JA4 679 aa12.12□□□□□ -0.47
PRPF39-204ENST00000553605 CDK15Q96Q40 435 aa12.12□□□□□ -0.47
PRPF39-204ENST00000553605 FRG2BQ96QU4 278 aa12.12□□□□□ -0.47
PRPF39-204ENST00000553605 VRK1Q99986 396 aaPredicted RBP12.12□□□□□ -0.47
PRPF39-204ENST00000553605 FKRPQ9H9S5 495 aa12.12□□□□□ -0.47
PRPF39-204ENST00000553605 BCO1Q9HAY6 547 aa12.12□□□□□ -0.47
PRPF39-204ENST00000553605 NMRAL1Q9HBL8 299 aa12.12□□□□□ -0.47
PRPF39-204ENST00000553605 MED17Q9NVC6 651 aa12.12□□□□□ -0.47
PRPF39-204ENST00000553605 ARMCX1Q9P291 453 aa12.12□□□□□ -0.47
PRPF39-204ENST00000553605 SLC25A15Q9Y619 301 aa12.12□□□□□ -0.47
PRPF39-204ENST00000553605 PRKDCP78527 4128 aaKnown RBP12.12□□□□□ -0.47
PRPF39-204ENST00000553605 ARFGEF3Q5TH69 2177 aa12.11□□□□□ -0.47
PRPF39-204ENST00000553605 A0A1W2PR80 420 aa12.11□□□□□ -0.47
PRPF39-204ENST00000553605 LILRA1O75019 489 aa12.11□□□□□ -0.47
PRPF39-204ENST00000553605 RAD51DO75771 328 aa12.11□□□□□ -0.47
PRPF39-204ENST00000553605 ESRRBO95718 433 aa12.11□□□□□ -0.47
PRPF39-204ENST00000553605 TACSTD2P09758 323 aa12.11□□□□□ -0.47
PRPF39-204ENST00000553605 EDNRAP25101 427 aa12.11□□□□□ -0.47
PRPF39-204ENST00000553605 ANP32AP39687 249 aaKnown RBP12.11□□□□□ -0.47
PRPF39-204ENST00000553605 ARL1P40616 181 aaPredicted RBP12.11□□□□□ -0.47
PRPF39-204ENST00000553605 LIMS1P48059 325 aa12.11□□□□□ -0.47
PRPF39-204ENST00000553605 ZNF75DP51815 510 aa12.11□□□□□ -0.47
PRPF39-204ENST00000553605 PHC1P78364 1004 aa12.11□□□□□ -0.47
PRPF39-204ENST00000553605 GALNT1Q10472 559 aaPredicted RBP12.11□□□□□ -0.47
PRPF39-204ENST00000553605 DLG1Q12959 904 aa12.11□□□□□ -0.47
PRPF39-204ENST00000553605 ZKSCAN8Q15776 578 aaPredicted RBP12.11□□□□□ -0.47
PRPF39-204ENST00000553605 PFKFB4Q16877 469 aa12.11□□□□□ -0.47
PRPF39-204ENST00000553605 TTC19Q6DKK2 380 aaPredicted RBP12.11□□□□□ -0.47
PRPF39-204ENST00000553605 UGT2A3Q6UWM9 527 aa12.11□□□□□ -0.47
PRPF39-204ENST00000553605 USP43Q70EL4 1123 aa12.11□□□□□ -0.47
PRPF39-204ENST00000553605 ANKS4BQ8N8V4 417 aa12.11□□□□□ -0.47
PRPF39-204ENST00000553605 POC1BQ8TC44 478 aa12.11□□□□□ -0.47
PRPF39-204ENST00000553605 ACTRT2Q8TDY3 377 aa12.11□□□□□ -0.47
PRPF39-204ENST00000553605 GPR22Q99680 433 aa12.11□□□□□ -0.47
PRPF39-204ENST00000553605 C1QTNF6Q9BXI9 259 aa12.11□□□□□ -0.47
PRPF39-204ENST00000553605 CXorf36Q9H7Y0 433 aa12.11□□□□□ -0.47
PRPF39-204ENST00000553605 Q9N2J8 555 aa12.11□□□□□ -0.47
PRPF39-204ENST00000553605 SENP1Q9P0U3 644 aa12.11□□□□□ -0.47
PRPF39-204ENST00000553605 KLHL9Q9P2J3 617 aa12.11□□□□□ -0.47
PRPF39-204ENST00000553605 NOTCH1P46531 2555 aa12.1□□□□□ -0.47
PRPF39-204ENST00000553605 CIB4A0PJX0 185 aa12.1□□□□□ -0.47
PRPF39-204ENST00000553605 SYCE1LA8MT33 242 aa12.1□□□□□ -0.47
PRPF39-204ENST00000553605 C9JVG2 144 aa12.1□□□□□ -0.47
PRPF39-204ENST00000553605 COQ9O75208 318 aa12.1□□□□□ -0.47
PRPF39-204ENST00000553605 SNUPNO95149 360 aaKnown RBP12.1□□□□□ -0.47
PRPF39-204ENST00000553605 STAMBPO95630 424 aa12.1□□□□□ -0.47
PRPF39-204ENST00000553605 GFAPP14136 432 aa12.1□□□□□ -0.47
PRPF39-204ENST00000553605 ENPP1P22413 925 aa12.1□□□□□ -0.47
PRPF39-204ENST00000553605 GIFP27352 417 aa12.1□□□□□ -0.47
PRPF39-204ENST00000553605 ARFIP2P53365 341 aa12.1□□□□□ -0.47
PRPF39-204ENST00000553605 SNRPD2P62316 118 aaKnown RBP12.1□□□□□ -0.47
PRPF39-204ENST00000553605 TRA2BP62995 288 aaKnown RBP12.1□□□□□ -0.47
PRPF39-204ENST00000553605 MLC1Q15049 377 aa12.1□□□□□ -0.47
PRPF39-204ENST00000553605 GRAMD1BQ3KR37 738 aa12.1□□□□□ -0.47
PRPF39-204ENST00000553605 SAMD14Q8IZD0 417 aaPredicted RBP12.1□□□□□ -0.47
PRPF39-204ENST00000553605 FBXO36Q8NEA4 188 aa12.1□□□□□ -0.47
PRPF39-204ENST00000553605 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.1□□□□□ -0.47
PRPF39-204ENST00000553605 ATP6V1E2Q96A05 226 aa12.1□□□□□ -0.47
PRPF39-204ENST00000553605 EXOSC8Q96B26 276 aaKnown RBP12.1□□□□□ -0.47
PRPF39-204ENST00000553605 ZNF775Q96BV0 537 aaPredicted RBP12.1□□□□□ -0.47
PRPF39-204ENST00000553605 SNX18Q96RF0 628 aa12.1□□□□□ -0.47
PRPF39-204ENST00000553605 JMJD8Q96S16 334 aa12.1□□□□□ -0.47
PRPF39-204ENST00000553605 PSD2Q9BQI7 771 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms