RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 ANXA3P12429 323 aa5.61□□□□□ -1.51
VPS29-210ENST00000552130 PMCHP20382 165 aa5.61□□□□□ -1.51
VPS29-210ENST00000552130 NR4A1P22736 598 aa5.61□□□□□ -1.51
VPS29-210ENST00000552130 HOXA7P31268 230 aaPredicted RBP5.61□□□□□ -1.51
VPS29-210ENST00000552130 TNFSF8P32971 234 aa5.61□□□□□ -1.51
VPS29-210ENST00000552130 RGRP47804 291 aa5.61□□□□□ -1.51
VPS29-210ENST00000552130 P2RY1P47900 373 aa5.61□□□□□ -1.51
VPS29-210ENST00000552130 TUFMP49411 452 aaKnown RBP5.61□□□□□ -1.51
VPS29-210ENST00000552130 CEBPGP53567 150 aa5.61□□□□□ -1.51
VPS29-210ENST00000552130 MRPS21P82921 87 aaKnown RBP5.61□□□□□ -1.51
VPS29-210ENST00000552130 COL4A3Q01955 1670 aa5.61□□□□□ -1.51
VPS29-210ENST00000552130 ORC2Q13416 577 aaPredicted RBP5.61□□□□□ -1.51
VPS29-210ENST00000552130 TFDP1Q14186 410 aa5.61□□□□□ -1.51
VPS29-210ENST00000552130 MEF2DQ14814 521 aa5.61□□□□□ -1.51
VPS29-210ENST00000552130 PTPRRQ15256 657 aa5.61□□□□□ -1.51
VPS29-210ENST00000552130 MOGQ16653 247 aa5.61□□□□□ -1.51
VPS29-210ENST00000552130 PHLDA2Q53GA4 152 aa5.61□□□□□ -1.51
VPS29-210ENST00000552130 XKR6Q5GH73 641 aa5.61□□□□□ -1.51
VPS29-210ENST00000552130 MTX3Q5HYI7 312 aa5.61□□□□□ -1.51
VPS29-210ENST00000552130 COQ5Q5HYK3 327 aa5.61□□□□□ -1.51
VPS29-210ENST00000552130 AGAP7PQ5VUJ5 663 aa5.61□□□□□ -1.51
VPS29-210ENST00000552130 FAM122CQ6P4D5 195 aa5.61□□□□□ -1.51
VPS29-210ENST00000552130 CLEC18BQ6UXF7 455 aa5.61□□□□□ -1.51
VPS29-210ENST00000552130 UNQ6126/PRO20091Q6UXV3 157 aa5.61□□□□□ -1.51
VPS29-210ENST00000552130 C17orf107Q6ZR85 190 aa5.61□□□□□ -1.51
VPS29-210ENST00000552130 Q75L30 129 aa5.61□□□□□ -1.51
VPS29-210ENST00000552130 UTS2BQ765I0 119 aa5.61□□□□□ -1.51
VPS29-210ENST00000552130 SHFQ7M4L6 423 aa5.61□□□□□ -1.51
VPS29-210ENST00000552130 FAM122BQ7Z309 247 aa5.61□□□□□ -1.51
VPS29-210ENST00000552130 COX8CQ7Z4L0 72 aa5.61□□□□□ -1.51
VPS29-210ENST00000552130 MOB3BQ86TA1 216 aa5.61□□□□□ -1.51
VPS29-210ENST00000552130 ZNF546Q86UE3 836 aa5.61□□□□□ -1.51
VPS29-210ENST00000552130 PALB2Q86YC2 1186 aa5.61□□□□□ -1.51
VPS29-210ENST00000552130 MARCH9Q86YJ5 346 aa5.61□□□□□ -1.51
VPS29-210ENST00000552130 VRK3Q8IV63 474 aa5.61□□□□□ -1.51
VPS29-210ENST00000552130 CPSF7Q8N684 471 aaKnown RBP5.61□□□□□ -1.51
VPS29-210ENST00000552130 INO80EQ8NBZ0 244 aaPredicted RBP5.61□□□□□ -1.51
VPS29-210ENST00000552130 CLEC18CQ8NCF0 446 aa5.61□□□□□ -1.51
VPS29-210ENST00000552130 OR11H4Q8NGC9 324 aa5.61□□□□□ -1.51
VPS29-210ENST00000552130 ZNF473Q8WTR7 871 aaKnown RBP5.61□□□□□ -1.51
VPS29-210ENST00000552130 CA5BP1Q8WTZ4 195 aa5.61□□□□□ -1.51
VPS29-210ENST00000552130 ACOT11Q8WXI4 607 aaPredicted RBP5.61□□□□□ -1.51
VPS29-210ENST00000552130 HSD17B8Q92506 261 aa5.61□□□□□ -1.51
VPS29-210ENST00000552130 BPIFA2Q96DR5 249 aa5.61□□□□□ -1.51
VPS29-210ENST00000552130 C9orf72Q96LT7 481 aa5.61□□□□□ -1.51
VPS29-210ENST00000552130 AGAP4Q96P64 663 aa5.61□□□□□ -1.51
VPS29-210ENST00000552130 OPALINQ96PE5 141 aa5.61□□□□□ -1.51
VPS29-210ENST00000552130 BBC3Q96PG8 261 aaPredicted RBP5.61□□□□□ -1.51
VPS29-210ENST00000552130 MLST8Q9BVC4 326 aa5.61□□□□□ -1.51
VPS29-210ENST00000552130 ANKRD19PQ9H560 264 aa5.61□□□□□ -1.51
VPS29-210ENST00000552130 TLE6Q9H808 572 aa5.61□□□□□ -1.51
VPS29-210ENST00000552130 INPP5EQ9NRR6 644 aa5.61□□□□□ -1.51
VPS29-210ENST00000552130 C2orf42Q9NWW7 574 aa5.61□□□□□ -1.51
VPS29-210ENST00000552130 APOBEC3BQ9UH17 382 aaKnown RBP5.61□□□□□ -1.51
VPS29-210ENST00000552130 CNTNAP2Q9UHC6 1331 aa5.61□□□□□ -1.51
VPS29-210ENST00000552130 CLEC2DQ9UHP7 191 aa5.61□□□□□ -1.51
VPS29-210ENST00000552130 DAPK2Q9UIK4 370 aa5.61□□□□□ -1.51
VPS29-210ENST00000552130 FZD1Q9UP38 647 aa5.61□□□□□ -1.51
VPS29-210ENST00000552130 YIPF1Q9Y548 306 aa5.61□□□□□ -1.51
VPS29-210ENST00000552130 FKBP7Q9Y680 259 aa5.61□□□□□ -1.51
VPS29-210ENST00000552130 RPAP1Q9BWH6 1393 aaPredicted RBP5.6□□□□□ -1.51
VPS29-210ENST00000552130 FRMPD4Q14CM0 1322 aa5.6□□□□□ -1.51
VPS29-210ENST00000552130 SLC22A23A1A5C7 686 aa5.6□□□□□ -1.51
VPS29-210ENST00000552130 NPIPA7E9PJI5 369 aa5.6□□□□□ -1.51
VPS29-210ENST00000552130 SLCO1B7G3V0H7 640 aa5.6□□□□□ -1.51
VPS29-210ENST00000552130 RNASET2O00584 256 aaKnown RBP5.6□□□□□ -1.51
VPS29-210ENST00000552130 GAPDHSO14556 408 aaPredicted RBP5.6□□□□□ -1.51
VPS29-210ENST00000552130 SNAI2O43623 268 aa5.6□□□□□ -1.51
VPS29-210ENST00000552130 RNASEH1O60930 286 aaKnown RBP5.6□□□□□ -1.51
VPS29-210ENST00000552130 OAZ2O95190 189 aa5.6□□□□□ -1.51
VPS29-210ENST00000552130 LRATO95237 230 aa5.6□□□□□ -1.51
VPS29-210ENST00000552130 IGF1P05019 195 aa5.6□□□□□ -1.51
VPS29-210ENST00000552130 DCNP07585 359 aaKnown RBP5.6□□□□□ -1.51
VPS29-210ENST00000552130 GOLGA8HP0CJ92 632 aa5.6□□□□□ -1.51
VPS29-210ENST00000552130 NPIPA8P0DM63 369 aa5.6□□□□□ -1.51
VPS29-210ENST00000552130 KITLGP21583 273 aa5.6□□□□□ -1.51
VPS29-210ENST00000552130 GPX3P22352 226 aa5.6□□□□□ -1.51
VPS29-210ENST00000552130 GIFP27352 417 aa5.6□□□□□ -1.51
VPS29-210ENST00000552130 DCKP27707 260 aa5.6□□□□□ -1.51
VPS29-210ENST00000552130 PCK1P35558 622 aa5.6□□□□□ -1.51
VPS29-210ENST00000552130 UGT2B10P36537 528 aa5.6□□□□□ -1.51
VPS29-210ENST00000552130 SLC26A3P40879 764 aa5.6□□□□□ -1.51
VPS29-210ENST00000552130 ID1P41134 155 aa5.6□□□□□ -1.51
VPS29-210ENST00000552130 ACTR1BP42025 376 aa5.6□□□□□ -1.51
VPS29-210ENST00000552130 PPP3CCP48454 512 aa5.6□□□□□ -1.51
VPS29-210ENST00000552130 SGSHP51688 502 aa5.6□□□□□ -1.51
VPS29-210ENST00000552130 CDH12P55289 794 aa5.6□□□□□ -1.51
VPS29-210ENST00000552130 CX3CL1P78423 397 aa5.6□□□□□ -1.51
VPS29-210ENST00000552130 OC90Q02509 493 aaPredicted RBP5.6□□□□□ -1.51
VPS29-210ENST00000552130 CHI3L2Q15782 390 aa5.6□□□□□ -1.51
VPS29-210ENST00000552130 SGCAQ16586 387 aa5.6□□□□□ -1.51
VPS29-210ENST00000552130 GOLGA7BQ2TAP0 167 aa5.6□□□□□ -1.51
VPS29-210ENST00000552130 TIGD2Q4W5G0 525 aa5.6□□□□□ -1.51
VPS29-210ENST00000552130 ABHD17BQ5VST6 288 aa5.6□□□□□ -1.51
VPS29-210ENST00000552130 NEPROQ6NW34 567 aa5.6□□□□□ -1.51
VPS29-210ENST00000552130 SLC27A4Q6P1M0 643 aa5.6□□□□□ -1.51
VPS29-210ENST00000552130 LINGO4Q6UY18 593 aa5.6□□□□□ -1.51
VPS29-210ENST00000552130 ZNF562Q6V9R5 426 aa5.6□□□□□ -1.51
VPS29-210ENST00000552130 NAPRTQ6XQN6 538 aa5.6□□□□□ -1.51
VPS29-210ENST00000552130 TMEM184AQ6ZMB5 413 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms