RNA–Protein interactions for RNA: ENST00000546741.2

PKP2-204, Transcript of plakophilin 2, humanhuman

TSL 2

Gene PKP2, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2-204ENST00000546741 TRAM2Q15035 370 aa13.62□□□□□ -0.23
PKP2-204ENST00000546741 NCF4Q15080 339 aa13.62□□□□□ -0.23
PKP2-204ENST00000546741 TRIP6Q15654 476 aaKnown RBP13.62□□□□□ -0.23
PKP2-204ENST00000546741 STPG1Q5TH74 334 aa13.62□□□□□ -0.23
PKP2-204ENST00000546741 LAIR2Q6ISS4 152 aa13.62□□□□□ -0.23
PKP2-204ENST00000546741 KRT80Q6KB66 452 aa13.62□□□□□ -0.23
PKP2-204ENST00000546741 C1orf94Q6P1W5 598 aa13.62□□□□□ -0.23
PKP2-204ENST00000546741 TMEM154Q6P9G4 183 aa13.62□□□□□ -0.23
PKP2-204ENST00000546741 PAPD4Q6PIY7 484 aaKnown RBP13.62□□□□□ -0.23
PKP2-204ENST00000546741 KLHL17Q6TDP4 642 aa13.62□□□□□ -0.23
PKP2-204ENST00000546741 THAP5Q7Z6K1 395 aa13.62□□□□□ -0.23
PKP2-204ENST00000546741 ZER1Q7Z7L7 766 aa13.62□□□□□ -0.23
PKP2-204ENST00000546741 FAM71CQ8NEG0 241 aa13.62□□□□□ -0.23
PKP2-204ENST00000546741 EFHD2Q96C19 240 aaPredicted RBP13.62□□□□□ -0.23
PKP2-204ENST00000546741 SLC41A3Q96GZ6 507 aa13.62□□□□□ -0.23
PKP2-204ENST00000546741 HRASLS5Q96KN8 279 aa13.62□□□□□ -0.23
PKP2-204ENST00000546741 PRSS27Q9BQR3 290 aa13.62□□□□□ -0.23
PKP2-204ENST00000546741 NRSN2Q9GZP1 204 aa13.62□□□□□ -0.23
PKP2-204ENST00000546741 HOXD1Q9GZZ0 328 aa13.62□□□□□ -0.23
PKP2-204ENST00000546741 RIBC2Q9H4K1 309 aa13.62□□□□□ -0.23
PKP2-204ENST00000546741 FAM86C1Q9NVL1 165 aa13.62□□□□□ -0.23
PKP2-204ENST00000546741 REV1Q9UBZ9 1251 aa13.62□□□□□ -0.23
PKP2-204ENST00000546741 TESQ9UGI8 421 aaKnown RBP13.62□□□□□ -0.23
PKP2-204ENST00000546741 CCDC187A0A096LP49 1063 aa13.62□□□□□ -0.23
PKP2-204ENST00000546741 SERINC4A6NH21 518 aa13.62□□□□□ -0.23
PKP2-204ENST00000546741 TMEM200CA6NKL6 621 aa13.62□□□□□ -0.23
PKP2-204ENST00000546741 C9orf172C9J069 976 aa13.62□□□□□ -0.23
PKP2-204ENST00000546741 BCKDKO14874 412 aa13.62□□□□□ -0.23
PKP2-204ENST00000546741 TP53P04637 393 aaPredicted RBP13.62□□□□□ -0.23
PKP2-204ENST00000546741 TBXA2RP21731 343 aa13.62□□□□□ -0.23
PKP2-204ENST00000546741 RPS6KA3P51812 740 aa13.62□□□□□ -0.23
PKP2-204ENST00000546741 NR0B1P51843 470 aaKnown RBP13.62□□□□□ -0.23
PKP2-204ENST00000546741 SLC26A5P58743 744 aa13.62□□□□□ -0.23
PKP2-204ENST00000546741 PSPHP78330 225 aa13.62□□□□□ -0.23
PKP2-204ENST00000546741 EIF3IQ13347 325 aaKnown RBP13.62□□□□□ -0.23
PKP2-204ENST00000546741 RAPSNQ13702 412 aa13.62□□□□□ -0.23
PKP2-204ENST00000546741 PCOLCEQ15113 449 aa13.62□□□□□ -0.23
PKP2-204ENST00000546741 OR1Q1Q15612 314 aa13.62□□□□□ -0.23
PKP2-204ENST00000546741 FAM69BQ5VUD6 431 aa13.62□□□□□ -0.23
PKP2-204ENST00000546741 DHRS13Q6UX07 377 aa13.62□□□□□ -0.23
PKP2-204ENST00000546741 CD300LDQ6UXZ3 194 aa13.62□□□□□ -0.23
PKP2-204ENST00000546741 PLEKHM3Q6ZWE6 761 aa13.62□□□□□ -0.23
PKP2-204ENST00000546741 TIPARPQ7Z3E1 657 aaKnown RBP13.62□□□□□ -0.23
PKP2-204ENST00000546741 RANBP3LQ86VV4 465 aaPredicted RBP13.62□□□□□ -0.23
PKP2-204ENST00000546741 CCDC71Q8IV32 467 aaPredicted RBP13.62□□□□□ -0.23
PKP2-204ENST00000546741 NKAIN4Q8IVV8 208 aa13.62□□□□□ -0.23
PKP2-204ENST00000546741 C8orf59Q8N0T1 100 aaPredicted RBP13.62□□□□□ -0.23
PKP2-204ENST00000546741 SLC34A3Q8N130 599 aa13.62□□□□□ -0.23
PKP2-204ENST00000546741 TOR1AIP2Q8NFQ8 470 aa13.62□□□□□ -0.23
PKP2-204ENST00000546741 OR4K5Q8NGD3 323 aa13.62□□□□□ -0.23
PKP2-204ENST00000546741 OR8K3Q8NH51 312 aa13.62□□□□□ -0.23
PKP2-204ENST00000546741 NUBPLQ8TB37 319 aa13.62□□□□□ -0.23
PKP2-204ENST00000546741 VMP1Q96GC9 406 aa13.62□□□□□ -0.23
PKP2-204ENST00000546741 DEPDC7Q96QD5 511 aa13.62□□□□□ -0.23
PKP2-204ENST00000546741 GAL3ST4Q96RP7 486 aa13.62□□□□□ -0.23
PKP2-204ENST00000546741 LPAR4Q99677 370 aa13.62□□□□□ -0.23
PKP2-204ENST00000546741 UBQLN4Q9NRR5 601 aa13.62□□□□□ -0.23
PKP2-204ENST00000546741 C19orf25Q9UFG5 118 aaPredicted RBP13.62□□□□□ -0.23
PKP2-204ENST00000546741 GPN3Q9UHW5 284 aaPredicted RBP13.62□□□□□ -0.23
PKP2-204ENST00000546741 A0A1W2PQ72 361 aa13.61□□□□□ -0.23
PKP2-204ENST00000546741 TRAPPC13A5PLN9 417 aa13.61□□□□□ -0.23
PKP2-204ENST00000546741 OR10H3O60404 316 aa13.61□□□□□ -0.23
PKP2-204ENST00000546741 UTS2O95399 124 aa13.61□□□□□ -0.23
PKP2-204ENST00000546741 NTN1O95631 604 aa13.61□□□□□ -0.23
PKP2-204ENST00000546741 CDK4P11802 303 aa13.61□□□□□ -0.23
PKP2-204ENST00000546741 CYP4B1P13584 511 aa13.61□□□□□ -0.23
PKP2-204ENST00000546741 PNLIPRP2P54317 469 aa13.61□□□□□ -0.23
PKP2-204ENST00000546741 RPP38P78345 283 aaKnown RBP13.61□□□□□ -0.23
PKP2-204ENST00000546741 IL1RL1Q01638 556 aa13.61□□□□□ -0.23
PKP2-204ENST00000546741 CD47Q08722 323 aa13.61□□□□□ -0.23
PKP2-204ENST00000546741 APOFQ13790 326 aa13.61□□□□□ -0.23
PKP2-204ENST00000546741 HLA-DQA1Q5Y7H0 255 aa13.61□□□□□ -0.23
PKP2-204ENST00000546741 ISLR2Q6UXK2 745 aa13.61□□□□□ -0.23
PKP2-204ENST00000546741 APOOLQ6UXV4 268 aa13.61□□□□□ -0.23
PKP2-204ENST00000546741 OR2Y1Q8NGV0 311 aa13.61□□□□□ -0.23
PKP2-204ENST00000546741 SLC38A4Q969I6 547 aa13.61□□□□□ -0.23
PKP2-204ENST00000546741 GTPBP3Q969Y2 492 aaKnown RBP13.61□□□□□ -0.23
PKP2-204ENST00000546741 C8orf44Q96CB5 159 aa13.61□□□□□ -0.23
PKP2-204ENST00000546741 GPA33Q99795 319 aa13.61□□□□□ -0.23
PKP2-204ENST00000546741 YTHDF1Q9BYJ9 559 aaKnown RBP13.61□□□□□ -0.23
PKP2-204ENST00000546741 PISDQ9UG56 409 aa13.61□□□□□ -0.23
PKP2-204ENST00000546741 SCOCQ9UIL1 159 aa13.61□□□□□ -0.23
PKP2-204ENST00000546741 MRTO4Q9UKD2 239 aaKnown RBP13.61□□□□□ -0.23
PKP2-204ENST00000546741 PCDHGA6Q9Y5G7 932 aa13.61□□□□□ -0.23
PKP2-204ENST00000546741 HSPE1-MOB4S4R3N1 261 aa13.61□□□□□ -0.23
PKP2-204ENST00000546741 CDC14CA4D256 554 aa13.6□□□□□ -0.23
PKP2-204ENST00000546741 C9J4A7 227 aa13.6□□□□□ -0.23
PKP2-204ENST00000546741 PLD2O14939 933 aa13.6□□□□□ -0.23
PKP2-204ENST00000546741 FOXD2O60548 495 aaPredicted RBP13.6□□□□□ -0.23
PKP2-204ENST00000546741 SEC24DO94855 1032 aaPredicted RBP13.6□□□□□ -0.23
PKP2-204ENST00000546741 NGFRP08138 427 aa13.6□□□□□ -0.23
PKP2-204ENST00000546741 POU2F1P14859 743 aa13.6□□□□□ -0.23
PKP2-204ENST00000546741 MMP11P24347 488 aa13.6□□□□□ -0.23
PKP2-204ENST00000546741 ABCD3P28288 659 aa13.6□□□□□ -0.23
PKP2-204ENST00000546741 FOXD4Q12950 439 aaPredicted RBP13.6□□□□□ -0.23
PKP2-204ENST00000546741 CTU2Q2VPK5 515 aaKnown RBP13.6□□□□□ -0.23
PKP2-204ENST00000546741 KCTD21Q4G0X4 260 aa13.6□□□□□ -0.23
PKP2-204ENST00000546741 HES3Q5TGS1 186 aa13.6□□□□□ -0.23
PKP2-204ENST00000546741 DESI1Q6ICB0 168 aa13.6□□□□□ -0.23
PKP2-204ENST00000546741 ZNF613Q6PF04 617 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms