RNA–Protein interactions for RNA: ENST00000546490.1

CHPT1-202, Transcript of choline phosphotransferase 1, humanhuman

TSL 2

Gene CHPT1, Length 476 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-202ENST00000546490 PIGTQ969N2 578 aa16.81■□□□□ 0.28
CHPT1-202ENST00000546490 FAM120BQ96EK7 910 aaKnown RBP16.81■□□□□ 0.28
CHPT1-202ENST00000546490 OTUB1Q96FW1 271 aaPredicted RBP16.81■□□□□ 0.28
CHPT1-202ENST00000546490 ZC3HAV1LQ96H79 300 aaKnown RBP16.81■□□□□ 0.28
CHPT1-202ENST00000546490 SH3YL1Q96HL8 342 aaPredicted RBP16.81■□□□□ 0.28
CHPT1-202ENST00000546490 GMPPAQ96IJ6 420 aaPredicted RBP16.81■□□□□ 0.28
CHPT1-202ENST00000546490 C18orf12Q96KH6 178 aa16.81■□□□□ 0.28
CHPT1-202ENST00000546490 PPP3R2Q96LZ3 170 aa16.81■□□□□ 0.28
CHPT1-202ENST00000546490 RNF145Q96MT1 663 aa16.81■□□□□ 0.28
CHPT1-202ENST00000546490 PIP5K1AQ99755 562 aa16.81■□□□□ 0.28
CHPT1-202ENST00000546490 GSX1Q9H4S2 264 aaPredicted RBP16.81■□□□□ 0.28
CHPT1-202ENST00000546490 UBTD1Q9HAC8 227 aa16.81■□□□□ 0.28
CHPT1-202ENST00000546490 MED17Q9NVC6 651 aa16.81■□□□□ 0.28
CHPT1-202ENST00000546490 TRAF6Q9Y4K3 522 aa16.81■□□□□ 0.28
CHPT1-202ENST00000546490 A0A1W2PQD3 144 aa16.8■□□□□ 0.28
CHPT1-202ENST00000546490 TLDC2A0PJX2 215 aa16.8■□□□□ 0.28
CHPT1-202ENST00000546490 ARHGEF9O43307 516 aa16.8■□□□□ 0.28
CHPT1-202ENST00000546490 SMPD2O60906 423 aa16.8■□□□□ 0.28
CHPT1-202ENST00000546490 SS18L1O75177 396 aaPredicted RBP16.8■□□□□ 0.28
CHPT1-202ENST00000546490 SYNGR4O95473 234 aa16.8■□□□□ 0.28
CHPT1-202ENST00000546490 EFNA1P20827 205 aaPredicted RBP16.8■□□□□ 0.28
CHPT1-202ENST00000546490 FPR1P21462 350 aa16.8■□□□□ 0.28
CHPT1-202ENST00000546490 ALDH3A1P30838 453 aa16.8■□□□□ 0.28
CHPT1-202ENST00000546490 RAC1P63000 192 aa16.8■□□□□ 0.28
CHPT1-202ENST00000546490 EXOC3L2Q2M3D2 409 aa16.8■□□□□ 0.28
CHPT1-202ENST00000546490 ARL13AQ5H913 290 aaPredicted RBP16.8■□□□□ 0.28
CHPT1-202ENST00000546490 PDSS1Q5T2R2 415 aa16.8■□□□□ 0.28
CHPT1-202ENST00000546490 ESPNLQ6ZVH7 1005 aa16.8■□□□□ 0.28
CHPT1-202ENST00000546490 P3H2Q8IVL5 708 aa16.8■□□□□ 0.28
CHPT1-202ENST00000546490 BANPQ8N9N5 519 aa16.8■□□□□ 0.28
CHPT1-202ENST00000546490 C16orf58Q96GQ5 468 aa16.8■□□□□ 0.28
CHPT1-202ENST00000546490 STACQ99469 402 aa16.8■□□□□ 0.28
CHPT1-202ENST00000546490 BTBD2Q9BX70 525 aa16.8■□□□□ 0.28
CHPT1-202ENST00000546490 KLHL4Q9C0H6 718 aa16.8■□□□□ 0.28
CHPT1-202ENST00000546490 FANCFQ9NPI8 374 aa16.8■□□□□ 0.28
CHPT1-202ENST00000546490 DUSP22Q9NRW4 184 aa16.8■□□□□ 0.28
CHPT1-202ENST00000546490 SIRT3Q9NTG7 399 aaPredicted RBP16.8■□□□□ 0.28
CHPT1-202ENST00000546490 ATP6V1HQ9UI12 483 aa16.8■□□□□ 0.28
CHPT1-202ENST00000546490 NUP214P35658 2090 aaPredicted RBP16.79■□□□□ 0.28
CHPT1-202ENST00000546490 NSD1Q96L73 2696 aaPredicted RBP16.79■□□□□ 0.28
CHPT1-202ENST00000546490 ARID1AO14497 2285 aa16.79■□□□□ 0.28
CHPT1-202ENST00000546490 HMGN2P05204 90 aaKnown RBP16.79■□□□□ 0.28
CHPT1-202ENST00000546490 PPP3CBP16298 524 aa16.79■□□□□ 0.28
CHPT1-202ENST00000546490 HOXB4P17483 251 aaPredicted RBP16.79■□□□□ 0.28
CHPT1-202ENST00000546490 ATP6V1C1P21283 382 aa16.79■□□□□ 0.28
CHPT1-202ENST00000546490 ADSLP30566 484 aaPredicted RBP16.79■□□□□ 0.28
CHPT1-202ENST00000546490 SLC6A8P48029 635 aa16.79■□□□□ 0.28
CHPT1-202ENST00000546490 LASP1Q14847 261 aaKnown RBP16.79■□□□□ 0.28
CHPT1-202ENST00000546490 CTU2Q2VPK5 515 aaKnown RBP16.79■□□□□ 0.28
CHPT1-202ENST00000546490 ATP6AP1LQ52LC2 224 aa16.79■□□□□ 0.28
CHPT1-202ENST00000546490 XKR7Q5GH72 579 aa16.79■□□□□ 0.28
CHPT1-202ENST00000546490 Q5PR19 223 aa16.79■□□□□ 0.28
CHPT1-202ENST00000546490 EXOSC6Q5RKV6 272 aaKnown RBP16.79■□□□□ 0.28
CHPT1-202ENST00000546490 CCNJQ5T5M9 372 aa16.79■□□□□ 0.28
CHPT1-202ENST00000546490 CPTPQ5TA50 214 aa16.79■□□□□ 0.28
CHPT1-202ENST00000546490 C20orf204Q6ZNR8 217 aa16.79■□□□□ 0.28
CHPT1-202ENST00000546490 TRABD2AQ86V40 505 aa16.79■□□□□ 0.28
CHPT1-202ENST00000546490 LRRC75A-AS1Q8N1F1 130 aa16.79■□□□□ 0.28
CHPT1-202ENST00000546490 ZNF527Q8NB42 609 aa16.79■□□□□ 0.28
CHPT1-202ENST00000546490 OR2W6PQ8NHA6 318 aa16.79■□□□□ 0.28
CHPT1-202ENST00000546490 OR2V1Q8NHB1 315 aa16.79■□□□□ 0.28
CHPT1-202ENST00000546490 B4GALNT2Q8NHY0 566 aa16.79■□□□□ 0.28
CHPT1-202ENST00000546490 AGR3Q8TD06 166 aa16.79■□□□□ 0.28
CHPT1-202ENST00000546490 CDS1Q92903 461 aa16.79■□□□□ 0.28
CHPT1-202ENST00000546490 ADGRG7Q96K78 797 aa16.79■□□□□ 0.28
CHPT1-202ENST00000546490 CCL19Q99731 98 aa16.79■□□□□ 0.28
CHPT1-202ENST00000546490 MECRQ9BV79 373 aa16.79■□□□□ 0.28
CHPT1-202ENST00000546490 TMEM185BQ9H7F4 350 aa16.79■□□□□ 0.28
CHPT1-202ENST00000546490 GLRX2Q9NS18 164 aa16.79■□□□□ 0.28
CHPT1-202ENST00000546490 ATAD3AQ9NVI7 634 aa16.79■□□□□ 0.28
CHPT1-202ENST00000546490 FBXO34Q9NWN3 711 aa16.79■□□□□ 0.28
CHPT1-202ENST00000546490 CLEC4AQ9UMR7 237 aa16.79■□□□□ 0.28
CHPT1-202ENST00000546490 SNX8Q9Y5X2 465 aa16.79■□□□□ 0.28
CHPT1-202ENST00000546490 NAV3Q8IVL0 2385 aa16.79■□□□□ 0.28
CHPT1-202ENST00000546490 TNFSF11O14788 317 aa16.78■□□□□ 0.28
CHPT1-202ENST00000546490 ADAMDEC1O15204 470 aa16.78■□□□□ 0.28
CHPT1-202ENST00000546490 CXCL13O43927 109 aa16.78■□□□□ 0.28
CHPT1-202ENST00000546490 KRT16P08779 473 aa16.78■□□□□ 0.28
CHPT1-202ENST00000546490 PSMA4P25789 261 aaKnown RBP16.78■□□□□ 0.28
CHPT1-202ENST00000546490 ELK4P28324 431 aa16.78■□□□□ 0.28
CHPT1-202ENST00000546490 SERPINB5P36952 375 aa16.78■□□□□ 0.28
CHPT1-202ENST00000546490 EIF1P41567 113 aaKnown RBP16.78■□□□□ 0.28
CHPT1-202ENST00000546490 CD226Q15762 336 aa16.78■□□□□ 0.28
CHPT1-202ENST00000546490 ACKR1Q16570 336 aa16.78■□□□□ 0.28
CHPT1-202ENST00000546490 UGT3A2Q3SY77 523 aa16.78■□□□□ 0.28
CHPT1-202ENST00000546490 HBMQ6B0K9 141 aa16.78■□□□□ 0.28
CHPT1-202ENST00000546490 MTERF4Q7Z6M4 381 aaKnown RBP16.78■□□□□ 0.28
CHPT1-202ENST00000546490 STK32CQ86UX6 486 aa16.78■□□□□ 0.28
CHPT1-202ENST00000546490 NATD1Q8N6N6 113 aa16.78■□□□□ 0.28
CHPT1-202ENST00000546490 OR7A2PQ8NGA2 310 aa16.78■□□□□ 0.28
CHPT1-202ENST00000546490 OR56A1Q8NGH5 318 aa16.78■□□□□ 0.28
CHPT1-202ENST00000546490 MARK4Q96L34 752 aa16.78■□□□□ 0.28
CHPT1-202ENST00000546490 NPAS1Q99742 590 aa16.78■□□□□ 0.28
CHPT1-202ENST00000546490 PIGUQ9H490 435 aa16.78■□□□□ 0.28
CHPT1-202ENST00000546490 PLSCR4Q9NRQ2 329 aa16.78■□□□□ 0.28
CHPT1-202ENST00000546490 GIN1Q9NXP7 522 aa16.78■□□□□ 0.28
CHPT1-202ENST00000546490 SLC17A7Q9P2U7 560 aa16.78■□□□□ 0.28
CHPT1-202ENST00000546490 GIMAP2Q9UG22 337 aa16.78■□□□□ 0.28
CHPT1-202ENST00000546490 PEX11AO75192 247 aa16.77■□□□□ 0.28
CHPT1-202ENST00000546490 LYPLA1O75608 230 aaPredicted RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms