RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 HRGP04196 525 aa8.42□□□□□ -1.06
YBX3-218ENST00000546298 SERPINE1P05121 402 aa8.42□□□□□ -1.06
YBX3-218ENST00000546298 MYZAPP0CAP1 466 aa8.42□□□□□ -1.06
YBX3-218ENST00000546298 PABPC4LP0CB38 370 aaKnown RBP8.42□□□□□ -1.06
YBX3-218ENST00000546298 POU2F1P14859 743 aa8.42□□□□□ -1.06
YBX3-218ENST00000546298 ETV4P43268 484 aa8.42□□□□□ -1.06
YBX3-218ENST00000546298 EIF1AXP47813 144 aaKnown RBP8.42□□□□□ -1.06
YBX3-218ENST00000546298 TPD52P55327 224 aaPredicted RBP8.42□□□□□ -1.06
YBX3-218ENST00000546298 CTBP2P56545 445 aa8.42□□□□□ -1.06
YBX3-218ENST00000546298 CLDN8P56748 225 aa8.42□□□□□ -1.06
YBX3-218ENST00000546298 SIRPAP78324 504 aa8.42□□□□□ -1.06
YBX3-218ENST00000546298 EMX2Q04743 252 aa8.42□□□□□ -1.06
YBX3-218ENST00000546298 FAM27E3Q08E93 113 aa8.42□□□□□ -1.06
YBX3-218ENST00000546298 PTGR1Q14914 329 aa8.42□□□□□ -1.06
YBX3-218ENST00000546298 CCNJQ5T5M9 372 aa8.42□□□□□ -1.06
YBX3-218ENST00000546298 PPP4R4Q6NUP7 873 aa8.42□□□□□ -1.06
YBX3-218ENST00000546298 VWA1Q6PCB0 445 aa8.42□□□□□ -1.06
YBX3-218ENST00000546298 ESPNLQ6ZVH7 1005 aa8.42□□□□□ -1.06
YBX3-218ENST00000546298 FAM214BQ7L5A3 538 aa8.42□□□□□ -1.06
YBX3-218ENST00000546298 GALNT10Q86SR1 603 aa8.42□□□□□ -1.06
YBX3-218ENST00000546298 TGIF2LYQ8IUE0 185 aa8.42□□□□□ -1.06
YBX3-218ENST00000546298 MREGQ8N565 214 aa8.42□□□□□ -1.06
YBX3-218ENST00000546298 GATSQ8NAP1 163 aa8.42□□□□□ -1.06
YBX3-218ENST00000546298 VPS37AQ8NEZ2 397 aa8.42□□□□□ -1.06
YBX3-218ENST00000546298 SFXN5Q8TD22 340 aa8.42□□□□□ -1.06
YBX3-218ENST00000546298 ARL8AQ96BM9 186 aa8.42□□□□□ -1.06
YBX3-218ENST00000546298 C3orf30Q96M34 536 aa8.42□□□□□ -1.06
YBX3-218ENST00000546298 MED18Q9BUE0 208 aa8.42□□□□□ -1.06
YBX3-218ENST00000546298 C1orf50Q9BV19 199 aa8.42□□□□□ -1.06
YBX3-218ENST00000546298 DUSP26Q9BV47 211 aa8.42□□□□□ -1.06
YBX3-218ENST00000546298 BHLHE41Q9C0J9 482 aaPredicted RBP8.42□□□□□ -1.06
YBX3-218ENST00000546298 PLEKHF2Q9H8W4 249 aa8.42□□□□□ -1.06
YBX3-218ENST00000546298 SSU72Q9NP77 194 aaKnown RBP8.42□□□□□ -1.06
YBX3-218ENST00000546298 TIGARQ9NQ88 270 aa8.42□□□□□ -1.06
YBX3-218ENST00000546298 GLRX2Q9NS18 164 aa8.42□□□□□ -1.06
YBX3-218ENST00000546298 SIRT3Q9NTG7 399 aaPredicted RBP8.42□□□□□ -1.06
YBX3-218ENST00000546298 MED17Q9NVC6 651 aa8.42□□□□□ -1.06
YBX3-218ENST00000546298 NOP53Q9NZM5 478 aaKnown RBP8.42□□□□□ -1.06
YBX3-218ENST00000546298 GIMAP2Q9UG22 337 aa8.42□□□□□ -1.06
YBX3-218ENST00000546298 PCDHGB4Q9UN71 923 aa8.42□□□□□ -1.06
YBX3-218ENST00000546298 TESMINQ9Y4I5 508 aa8.42□□□□□ -1.06
YBX3-218ENST00000546298 EML6Q6ZMW3 1958 aa8.42□□□□□ -1.06
YBX3-218ENST00000546298 ANKHD1Q8IWZ3 2542 aaKnown RBP8.42□□□□□ -1.06
YBX3-218ENST00000546298 POLQO75417 2590 aa8.42□□□□□ -1.06
YBX3-218ENST00000546298 GJE1A6NN92 205 aa8.41□□□□□ -1.06
YBX3-218ENST00000546298 ADAMDEC1O15204 470 aa8.41□□□□□ -1.06
YBX3-218ENST00000546298 TM9SF1O15321 606 aa8.41□□□□□ -1.06
YBX3-218ENST00000546298 AQP8O94778 261 aa8.41□□□□□ -1.06
YBX3-218ENST00000546298 ATE1O95260 518 aa8.41□□□□□ -1.06
YBX3-218ENST00000546298 C6orf47O95873 294 aa8.41□□□□□ -1.06
YBX3-218ENST00000546298 AK1P00568 194 aa8.41□□□□□ -1.06
YBX3-218ENST00000546298 CGAP01215 116 aa8.41□□□□□ -1.06
YBX3-218ENST00000546298 TUBBP07437 444 aa8.41□□□□□ -1.06
YBX3-218ENST00000546298 G6PDP11413 515 aa8.41□□□□□ -1.06
YBX3-218ENST00000546298 CREB1P16220 341 aa8.41□□□□□ -1.06
YBX3-218ENST00000546298 PPP3CBP16298 524 aa8.41□□□□□ -1.06
YBX3-218ENST00000546298 ELK4P28324 431 aa8.41□□□□□ -1.06
YBX3-218ENST00000546298 ADH6P28332 368 aa8.41□□□□□ -1.06
YBX3-218ENST00000546298 ATP12AP54707 1039 aa8.41□□□□□ -1.06
YBX3-218ENST00000546298 SUMO3P55854 103 aaPredicted RBP8.41□□□□□ -1.06
YBX3-218ENST00000546298 C21orf58P58505 322 aa8.41□□□□□ -1.06
YBX3-218ENST00000546298 DEFB113Q30KQ7 82 aa8.41□□□□□ -1.06
YBX3-218ENST00000546298 PGS1Q32NB8 556 aa8.41□□□□□ -1.06
YBX3-218ENST00000546298 PLPPR5Q32ZL2 321 aa8.41□□□□□ -1.06
YBX3-218ENST00000546298 DCST2Q5T1A1 773 aa8.41□□□□□ -1.06
YBX3-218ENST00000546298 HBMQ6B0K9 141 aa8.41□□□□□ -1.06
YBX3-218ENST00000546298 ZNF474Q6S9Z5 364 aaPredicted RBP8.41□□□□□ -1.06
YBX3-218ENST00000546298 ZAR1Q86SH2 424 aa8.41□□□□□ -1.06
YBX3-218ENST00000546298 STK32CQ86UX6 486 aa8.41□□□□□ -1.06
YBX3-218ENST00000546298 ZNF610Q8N9Z0 462 aa8.41□□□□□ -1.06
YBX3-218ENST00000546298 OR6K3Q8NGY3 331 aa8.41□□□□□ -1.06
YBX3-218ENST00000546298 OR10D3Q8NH80 312 aa8.41□□□□□ -1.06
YBX3-218ENST00000546298 OR2V1Q8NHB1 315 aa8.41□□□□□ -1.06
YBX3-218ENST00000546298 PHOSPHO1Q8TCT1 267 aa8.41□□□□□ -1.06
YBX3-218ENST00000546298 CDS1Q92903 461 aa8.41□□□□□ -1.06
YBX3-218ENST00000546298 SH3YL1Q96HL8 342 aaPredicted RBP8.41□□□□□ -1.06
YBX3-218ENST00000546298 REXO5Q96IC2 774 aaKnown RBP8.41□□□□□ -1.06
YBX3-218ENST00000546298 GMPPAQ96IJ6 420 aaPredicted RBP8.41□□□□□ -1.06
YBX3-218ENST00000546298 WFIKKN1Q96NZ8 548 aa8.41□□□□□ -1.06
YBX3-218ENST00000546298 TMUB1Q9BVT8 246 aa8.41□□□□□ -1.06
YBX3-218ENST00000546298 OPN3Q9H1Y3 402 aaPredicted RBP8.41□□□□□ -1.06
YBX3-218ENST00000546298 CXorf36Q9H7Y0 433 aa8.41□□□□□ -1.06
YBX3-218ENST00000546298 FBXO34Q9NWN3 711 aa8.41□□□□□ -1.06
YBX3-218ENST00000546298 ASIC5Q9NY37 505 aa8.41□□□□□ -1.06
YBX3-218ENST00000546298 ACTL7BQ9Y614 415 aa8.41□□□□□ -1.06
YBX3-218ENST00000546298 APCP25054 2843 aa8.41□□□□□ -1.06
YBX3-218ENST00000546298 HCFC1P51610 2035 aa8.41□□□□□ -1.06
YBX3-218ENST00000546298 WDR91A4D1P6 747 aa8.4□□□□□ -1.06
YBX3-218ENST00000546298 SHISA8B8ZZ34 492 aa8.4□□□□□ -1.06
YBX3-218ENST00000546298 CXCL13O43927 109 aa8.4□□□□□ -1.06
YBX3-218ENST00000546298 EIF4E2O60573 245 aaKnown RBP8.4□□□□□ -1.06
YBX3-218ENST00000546298 NUDT14O95848 222 aa8.4□□□□□ -1.06
YBX3-218ENST00000546298 FOSL1P15407 271 aa8.4□□□□□ -1.06
YBX3-218ENST00000546298 KLK2P20151 261 aa8.4□□□□□ -1.06
YBX3-218ENST00000546298 IL11P20809 199 aa8.4□□□□□ -1.06
YBX3-218ENST00000546298 PSMA4P25789 261 aaKnown RBP8.4□□□□□ -1.06
YBX3-218ENST00000546298 ARRB2P32121 409 aa8.4□□□□□ -1.06
YBX3-218ENST00000546298 SOAT1P35610 550 aa8.4□□□□□ -1.06
YBX3-218ENST00000546298 UGT2B10P36537 528 aa8.4□□□□□ -1.06
YBX3-218ENST00000546298 RPL14P50914 215 aaKnown RBP8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms