RNA–Protein interactions for RNA: ENST00000544810.5

CNGA1-209, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CNGA1, Length 2,722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-209ENST00000544810 PRKYO43930 277 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 ITGA10O75578 1167 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 CFDP00746 253 aaPredicted RBP4.3□□□□□ -1.72
CNGA1-209ENST00000544810 IGLV3-19P01714 112 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 HSMCR30P0CW71 290 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 ERCC2P18074 760 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 RPL35P42766 123 aaKnown RBP4.3□□□□□ -1.72
CNGA1-209ENST00000544810 INPP1P49441 399 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 STK19P49842 368 aaPredicted RBP4.3□□□□□ -1.72
CNGA1-209ENST00000544810 AKR1D1P51857 326 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 CDC42P60953 191 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 INSM1Q01101 510 aaPredicted RBP4.3□□□□□ -1.72
CNGA1-209ENST00000544810 STX4Q12846 297 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 PPP1R8Q12972 351 aaKnown RBP4.3□□□□□ -1.72
CNGA1-209ENST00000544810 C1DQ13901 141 aaKnown RBP4.3□□□□□ -1.72
CNGA1-209ENST00000544810 VEZF1Q14119 521 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 OPCMLQ14982 345 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 TMEM132DQ14C87 1099 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 SPHARQ15513 63 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 ZBTB6Q15916 424 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 MPEG1Q2M385 716 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 FAM76BQ5HYJ3 339 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 XP32Q5T750 250 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 MANEALQ5VSG8 457 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 NADSYN1Q6IA69 706 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 FAM180BQ6P0A1 224 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 FAM198BQ6UWH4 519 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 SHISA2Q6UWI4 295 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 SLCO4C1Q6ZQN7 724 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 UNC93AQ86WB7 457 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 PYROXD2Q8N2H3 581 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 C12orf29Q8N999 325 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 ELP5Q8TE02 316 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 KCTD7Q96MP8 289 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 NPY6RQ99463 290 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 CINPQ9BW66 212 aaPredicted RBP4.3□□□□□ -1.72
CNGA1-209ENST00000544810 SLC29A3Q9BZD2 475 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 PCED1AQ9H1Q7 454 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 OR51J1Q9H342 316 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 SLC25A19Q9HC21 320 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 EXOSC4Q9NPD3 245 aaKnown RBP4.3□□□□□ -1.72
CNGA1-209ENST00000544810 CLN6Q9NWW5 311 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 KCTD5Q9NXV2 234 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 MLXQ9UH92 298 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 PCTPQ9UKL6 214 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 NOTCH2Q04721 2471 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 PIPSLA2A3N6 862 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 A6NCN8 305 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 ANKDD1BA6NHY2 528 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 LACTBL1A8MY62 500 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 MYO1GB0I1T2 1018 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 D6RAR5 112 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 PDCD5O14737 125 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 SMAD6O43541 496 aaKnown RBP4.3□□□□□ -1.72
CNGA1-209ENST00000544810 SC5DO75845 299 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 CCNB2O95067 398 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 CDRT1O95170 752 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 SIX3O95343 332 aaPredicted RBP4.3□□□□□ -1.72
CNGA1-209ENST00000544810 EPOP01588 193 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 G6PDP11413 515 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 SPI1P17947 270 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 GALP22466 123 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 MAPK3P27361 379 aaPredicted RBP4.3□□□□□ -1.72
CNGA1-209ENST00000544810 APEX1P27695 318 aaKnown RBP4.3□□□□□ -1.72
CNGA1-209ENST00000544810 LCN1P31025 176 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 SPAM1P38567 509 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 RFC3P40938 356 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 VEGFCP49767 419 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 GDI2P50395 445 aaKnown RBP4.3□□□□□ -1.72
CNGA1-209ENST00000544810 CRISP3P54108 245 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 SNRPGP62308 76 aaKnown RBP4.3□□□□□ -1.72
CNGA1-209ENST00000544810 ACVR1Q04771 509 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 HNRNPA0Q13151 305 aaKnown RBP4.3□□□□□ -1.72
CNGA1-209ENST00000544810 SLC9A5Q14940 896 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 ZNF124Q15973 351 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 SNAPC1Q16533 368 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.3□□□□□ -1.72
CNGA1-209ENST00000544810 SOWAHAQ2M3V2 549 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 LY6G5CQ5SRR4 150 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 KRT77Q7Z794 578 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 OXR1Q8N573 874 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 NANOGP1Q8N7R0 232 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 RAD51AP1Q96B01 352 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 PGAP3Q96FM1 320 aaPredicted RBP4.3□□□□□ -1.72
CNGA1-209ENST00000544810 SCRN2Q96FV2 425 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 HPDLQ96IR7 371 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 PDCD10Q9BUL8 212 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 DPAGT1Q9H3H5 408 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 IKZF5Q9H5V7 419 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 GLOD4Q9HC38 313 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 ASCL3Q9NQ33 180 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 GSN-AS1Q9NRJ2 163 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 TXNL4BQ9NX01 149 aaKnown RBP4.3□□□□□ -1.72
CNGA1-209ENST00000544810 IMPAD1Q9NX62 359 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 MS4A12Q9NXJ0 267 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 MARCH2Q9P0N8 246 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 DEC1Q9P2X7 70 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 UBQLN1Q9UMX0 589 aaKnown RBP4.3□□□□□ -1.72
CNGA1-209ENST00000544810 GSTK1Q9Y2Q3 226 aa4.3□□□□□ -1.72
CNGA1-209ENST00000544810 PCDHB1Q9Y5F3 818 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms