RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, human

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDB1-223	ENST00000543658	FADS1	O60427	444 aa		10.89	□□□□□ -0.67
DDB1-223	ENST00000543658	SNX4	O95219	450 aa		10.89	□□□□□ -0.67
DDB1-223	ENST00000543658	NUDT14	O95848	222 aa		10.89	□□□□□ -0.67
DDB1-223	ENST00000543658	FES	P07332	822 aa		10.89	□□□□□ -0.67
DDB1-223	ENST00000543658	C8B	P07358	591 aa		10.89	□□□□□ -0.67
DDB1-223	ENST00000543658	UBTFL6	P0CB48	400 aa	Predicted RBP	10.89	□□□□□ -0.67
DDB1-223	ENST00000543658	CCL3	P10147	92 aa		10.89	□□□□□ -0.67
DDB1-223	ENST00000543658	UMPS	P11172	480 aa		10.89	□□□□□ -0.67
DDB1-223	ENST00000543658	CASP3	P42574	277 aa		10.89	□□□□□ -0.67
DDB1-223	ENST00000543658	KCNJ5	P48544	419 aa		10.89	□□□□□ -0.67
DDB1-223	ENST00000543658	RNF144A	P50876	292 aa	Predicted RBP	10.89	□□□□□ -0.67
DDB1-223	ENST00000543658	RGS8	P57771	180 aa	Predicted RBP	10.89	□□□□□ -0.67
DDB1-223	ENST00000543658	SELENOW	P63302	87 aa		10.89	□□□□□ -0.67
DDB1-223	ENST00000543658	RHD	Q02161	417 aa		10.89	□□□□□ -0.67
DDB1-223	ENST00000543658	CHRNB3	Q05901	458 aa		10.89	□□□□□ -0.67
DDB1-223	ENST00000543658	DMTN	Q08495	405 aa		10.89	□□□□□ -0.67
DDB1-223	ENST00000543658	C17orf67	Q0P5P2	114 aa		10.89	□□□□□ -0.67
DDB1-223	ENST00000543658	KCNAB2	Q13303	367 aa		10.89	□□□□□ -0.67
DDB1-223	ENST00000543658	MAPK14	Q16539	360 aa		10.89	□□□□□ -0.67
DDB1-223	ENST00000543658	FAM98B	Q52LJ0	330 aa	Known RBP	10.89	□□□□□ -0.67
DDB1-223	ENST00000543658	IFI44L	Q53G44	452 aa		10.89	□□□□□ -0.67
DDB1-223	ENST00000543658	KLHL26	Q53HC5	615 aa		10.89	□□□□□ -0.67
DDB1-223	ENST00000543658	ZNF766	Q5HY98	468 aa		10.89	□□□□□ -0.67
DDB1-223	ENST00000543658	SPINK14	Q6IE38	97 aa		10.89	□□□□□ -0.67
DDB1-223	ENST00000543658	SLC25A25	Q6KCM7	469 aa		10.89	□□□□□ -0.67
DDB1-223	ENST00000543658	TMEM81	Q6P7N7	255 aa		10.89	□□□□□ -0.67
DDB1-223	ENST00000543658	IGFL2	Q6UWQ7	119 aa		10.89	□□□□□ -0.67
DDB1-223	ENST00000543658	ZNF550	Q7Z398	422 aa		10.89	□□□□□ -0.67
DDB1-223	ENST00000543658	MARCH3	Q86UD3	253 aa		10.89	□□□□□ -0.67
DDB1-223	ENST00000543658	RANBP3L	Q86VV4	465 aa	Predicted RBP	10.89	□□□□□ -0.67
DDB1-223	ENST00000543658	OR4K17	Q8NGC6	315 aa		10.89	□□□□□ -0.67
DDB1-223	ENST00000543658	GEMIN6	Q8WXD5	167 aa	Known RBP	10.89	□□□□□ -0.67
DDB1-223	ENST00000543658	SLC47A1	Q96FL8	570 aa		10.89	□□□□□ -0.67
DDB1-223	ENST00000543658	ZNF597	Q96LX8	424 aa		10.89	□□□□□ -0.67
DDB1-223	ENST00000543658	JSRP1	Q96MG2	331 aa	Predicted RBP	10.89	□□□□□ -0.67
DDB1-223	ENST00000543658	SIGLEC12	Q96PQ1	595 aa		10.89	□□□□□ -0.67
DDB1-223	ENST00000543658	ADNP	Q9H2P0	1102 aa		10.89	□□□□□ -0.67
DDB1-223	ENST00000543658	GALNT9	Q9HCQ5	603 aa		10.89	□□□□□ -0.67
DDB1-223	ENST00000543658	KLHL1	Q9NR64	748 aa		10.89	□□□□□ -0.67
DDB1-223	ENST00000543658	ANAPC2	Q9UJX6	822 aa		10.89	□□□□□ -0.67
DDB1-223	ENST00000543658	CNOT11	Q9UKZ1	510 aa	Known RBP	10.89	□□□□□ -0.67
DDB1-223	ENST00000543658	BOK	Q9UMX3	212 aa	Predicted RBP	10.89	□□□□□ -0.67
DDB1-223	ENST00000543658	AURKC	Q9UQB9	309 aa		10.89	□□□□□ -0.67
DDB1-223	ENST00000543658	SH3GLB1	Q9Y371	365 aa		10.89	□□□□□ -0.67
DDB1-223	ENST00000543658	FREM2	Q5SZK8	3169 aa		10.88	□□□□□ -0.67
DDB1-223	ENST00000543658	CENPVL1	A0A0U1RR11	272 aa		10.88	□□□□□ -0.67
DDB1-223	ENST00000543658	DHRS12	A0PJE2	317 aa		10.88	□□□□□ -0.67
DDB1-223	ENST00000543658		G3V3Y1	287 aa		10.88	□□□□□ -0.67
DDB1-223	ENST00000543658	AP3D1	O14617	1153 aa		10.88	□□□□□ -0.67
DDB1-223	ENST00000543658	HCRTR2	O43614	444 aa		10.88	□□□□□ -0.67
DDB1-223	ENST00000543658	EIF4E2	O60573	245 aa	Known RBP	10.88	□□□□□ -0.67
DDB1-223	ENST00000543658	GCM2	O75603	506 aa	Predicted RBP	10.88	□□□□□ -0.67
DDB1-223	ENST00000543658	NEURL1	O76050	574 aa		10.88	□□□□□ -0.67
DDB1-223	ENST00000543658	PRKD3	O94806	890 aa		10.88	□□□□□ -0.67
DDB1-223	ENST00000543658	GPI	P06744	558 aa		10.88	□□□□□ -0.67
DDB1-223	ENST00000543658	SP1	P08047	785 aa		10.88	□□□□□ -0.67
DDB1-223	ENST00000543658	HOXB6	P17509	224 aa	Known RBP	10.88	□□□□□ -0.67
DDB1-223	ENST00000543658	CNR1	P21554	472 aa		10.88	□□□□□ -0.67
DDB1-223	ENST00000543658	IFNA8	P32881	189 aa		10.88	□□□□□ -0.67
DDB1-223	ENST00000543658	ADH7	P40394	386 aa		10.88	□□□□□ -0.67
DDB1-223	ENST00000543658	SLC6A8	P48029	635 aa		10.88	□□□□□ -0.67
DDB1-223	ENST00000543658	ERF	P50548	548 aa		10.88	□□□□□ -0.67
DDB1-223	ENST00000543658	EEF1A1	P68104	462 aa	Known RBP	10.88	□□□□□ -0.67
DDB1-223	ENST00000543658	PLGLB1	Q02325	96 aa		10.88	□□□□□ -0.67
DDB1-223	ENST00000543658	KPNB1	Q14974	876 aa	Known RBP	10.88	□□□□□ -0.67
DDB1-223	ENST00000543658	AP1AR	Q63HQ0	302 aa		10.88	□□□□□ -0.67
DDB1-223	ENST00000543658	BICRAL	Q6AI39	1079 aa		10.88	□□□□□ -0.67
DDB1-223	ENST00000543658	MDGA2	Q7Z553	956 aa		10.88	□□□□□ -0.67
DDB1-223	ENST00000543658	CNTRL	Q7Z7A1	2325 aa		10.88	□□□□□ -0.67
DDB1-223	ENST00000543658	MDS2	Q8NDY4	140 aa		10.88	□□□□□ -0.67
DDB1-223	ENST00000543658	TOR1AIP2	Q8NFQ8	470 aa		10.88	□□□□□ -0.67
DDB1-223	ENST00000543658	OR1J4	Q8NGS1	313 aa		10.88	□□□□□ -0.67
DDB1-223	ENST00000543658	B4GALNT2	Q8NHY0	566 aa		10.88	□□□□□ -0.67
DDB1-223	ENST00000543658	VANGL1	Q8TAA9	524 aa	Predicted RBP	10.88	□□□□□ -0.67
DDB1-223	ENST00000543658	C9orf43	Q8TAL5	461 aa	Predicted RBP	10.88	□□□□□ -0.67
DDB1-223	ENST00000543658	ZG16B	Q96DA0	208 aa		10.88	□□□□□ -0.67
DDB1-223	ENST00000543658	ABHD17A	Q96GS6	310 aa		10.88	□□□□□ -0.67
DDB1-223	ENST00000543658	SH3YL1	Q96HL8	342 aa	Predicted RBP	10.88	□□□□□ -0.67
DDB1-223	ENST00000543658	PYURF	Q96I23	114 aa		10.88	□□□□□ -0.67
DDB1-223	ENST00000543658	SEPHS2	Q99611	448 aa		10.88	□□□□□ -0.67
DDB1-223	ENST00000543658	FAM173A	Q9BQD7	235 aa		10.88	□□□□□ -0.67
DDB1-223	ENST00000543658	ANGPTL4	Q9BY76	406 aa		10.88	□□□□□ -0.67
DDB1-223	ENST00000543658	PTGES2	Q9H7Z7	377 aa		10.88	□□□□□ -0.67
DDB1-223	ENST00000543658	YY1AP1	Q9H869	796 aa		10.88	□□□□□ -0.67
DDB1-223	ENST00000543658	RPS6KB2	Q9UBS0	482 aa		10.88	□□□□□ -0.67
DDB1-223	ENST00000543658	B4GALT7	Q9UBV7	327 aa		10.88	□□□□□ -0.67
DDB1-223	ENST00000543658	KCNE5	Q9UJ90	142 aa		10.88	□□□□□ -0.67
DDB1-223	ENST00000543658	TUBD1	Q9UJT1	453 aa		10.88	□□□□□ -0.67
DDB1-223	ENST00000543658	TP53TG5	Q9Y2B4	290 aa		10.88	□□□□□ -0.67
DDB1-223	ENST00000543658	PCNX3	Q9H6A9	2034 aa		10.87	□□□□□ -0.67
DDB1-223	ENST00000543658	CDHR4	A6H8M9	788 aa		10.87	□□□□□ -0.67
DDB1-223	ENST00000543658	ANKRD33B	A6NCL7	494 aa		10.87	□□□□□ -0.67
DDB1-223	ENST00000543658	CLDN24	A6NM45	220 aa		10.87	□□□□□ -0.67
DDB1-223	ENST00000543658		M0R3H8	397 aa		10.87	□□□□□ -0.67
DDB1-223	ENST00000543658	GNB5	O14775	395 aa		10.87	□□□□□ -0.67
DDB1-223	ENST00000543658	GMFG	O60234	142 aa		10.87	□□□□□ -0.67
DDB1-223	ENST00000543658	NME2P1	O60361	137 aa		10.87	□□□□□ -0.67
DDB1-223	ENST00000543658	IFNW1	P05000	195 aa		10.87	□□□□□ -0.67
DDB1-223	ENST00000543658	FABP3	P05413	133 aa		10.87	□□□□□ -0.67
DDB1-223	ENST00000543658	ITGA2	P17301	1181 aa		10.87	□□□□□ -0.67

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