RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 SDSLQ96GA7 329 aa1.56□□□□□ -2.16
KNTC1-213ENST00000542727 TMEM80Q96HE8 168 aa1.56□□□□□ -2.16
KNTC1-213ENST00000542727 MS4A14Q96JA4 679 aa1.56□□□□□ -2.16
KNTC1-213ENST00000542727 SAMD8Q96LT4 415 aa1.56□□□□□ -2.16
KNTC1-213ENST00000542727 VSTM2LQ96N03 204 aa1.56□□□□□ -2.16
KNTC1-213ENST00000542727 TBCDQ9BTW9 1192 aa1.56□□□□□ -2.16
KNTC1-213ENST00000542727 WRAP53Q9BUR4 548 aaKnown RBP1.56□□□□□ -2.16
KNTC1-213ENST00000542727 ACTR8Q9H981 624 aa1.56□□□□□ -2.16
KNTC1-213ENST00000542727 LPAR2Q9HBW0 351 aa1.56□□□□□ -2.16
KNTC1-213ENST00000542727 VAT1LQ9HCJ6 419 aa1.56□□□□□ -2.16
KNTC1-213ENST00000542727 NGBQ9NPG2 151 aa1.56□□□□□ -2.16
KNTC1-213ENST00000542727 RDH8Q9NYR8 311 aa1.56□□□□□ -2.16
KNTC1-213ENST00000542727 NINJ2Q9NZG7 142 aa1.56□□□□□ -2.16
KNTC1-213ENST00000542727 OR1A1Q9P1Q5 309 aa1.56□□□□□ -2.16
KNTC1-213ENST00000542727 SPRR3Q9UBC9 169 aa1.56□□□□□ -2.16
KNTC1-213ENST00000542727 ATP6V1HQ9UI12 483 aa1.56□□□□□ -2.16
KNTC1-213ENST00000542727 XPO7Q9UIA9 1087 aaKnown RBP1.56□□□□□ -2.16
KNTC1-213ENST00000542727 CRLS1Q9UJA2 301 aa1.56□□□□□ -2.16
KNTC1-213ENST00000542727 UBQLN1Q9UMX0 589 aaKnown RBP1.56□□□□□ -2.16
KNTC1-213ENST00000542727 PARD3Q8TEW0 1356 aa1.56□□□□□ -2.16
KNTC1-213ENST00000542727 IGKV6-21A0A0C4DH24 114 aa1.55□□□□□ -2.16
KNTC1-213ENST00000542727 RNF103-CHMP3A0A140T963 221 aa1.55□□□□□ -2.16
KNTC1-213ENST00000542727 SMIM28A0A1B0GU29 152 aa1.55□□□□□ -2.16
KNTC1-213ENST00000542727 FAM230AA0A1W2PPH8 454 aa1.55□□□□□ -2.16
KNTC1-213ENST00000542727 RNF222A6NCQ9 220 aa1.55□□□□□ -2.16
KNTC1-213ENST00000542727 OR6C65A6NJZ3 312 aa1.55□□□□□ -2.16
KNTC1-213ENST00000542727 LRRC30A6NM36 301 aa1.55□□□□□ -2.16
KNTC1-213ENST00000542727 TMEM110-MUSTN1A8MSY1 372 aa1.55□□□□□ -2.16
KNTC1-213ENST00000542727 ABCD4O14678 606 aa1.55□□□□□ -2.16
KNTC1-213ENST00000542727 TRIM3O75382 744 aaPredicted RBP1.55□□□□□ -2.16
KNTC1-213ENST00000542727 SEC22BO75396 215 aa1.55□□□□□ -2.16
KNTC1-213ENST00000542727 MMP23AO75900 390 aa1.55□□□□□ -2.16
KNTC1-213ENST00000542727 CABYRO75952 493 aa1.55□□□□□ -2.16
KNTC1-213ENST00000542727 MBD3O95983 291 aa1.55□□□□□ -2.16
KNTC1-213ENST00000542727 CD55P08174 381 aa1.55□□□□□ -2.16
KNTC1-213ENST00000542727 GAP43P17677 238 aa1.55□□□□□ -2.16
KNTC1-213ENST00000542727 FUT1P19526 365 aa1.55□□□□□ -2.16
KNTC1-213ENST00000542727 ATP5A1P25705 553 aaKnown RBP1.55□□□□□ -2.16
KNTC1-213ENST00000542727 ADSSP30520 456 aa1.55□□□□□ -2.16
KNTC1-213ENST00000542727 NTSP30990 170 aa1.55□□□□□ -2.16
KNTC1-213ENST00000542727 PTGFRP43088 359 aa1.55□□□□□ -2.16
KNTC1-213ENST00000542727 STARP49675 285 aa1.55□□□□□ -2.16
KNTC1-213ENST00000542727 UCNP55089 124 aa1.55□□□□□ -2.16
KNTC1-213ENST00000542727 WNT4P56705 351 aa1.55□□□□□ -2.16
KNTC1-213ENST00000542727 RND3P61587 244 aa1.55□□□□□ -2.16
KNTC1-213ENST00000542727 TIMM10P62072 90 aa1.55□□□□□ -2.16
KNTC1-213ENST00000542727 BDH1Q02338 343 aa1.55□□□□□ -2.16
KNTC1-213ENST00000542727 PSG7Q13046 419 aa1.55□□□□□ -2.16
KNTC1-213ENST00000542727 IL17AQ16552 155 aa1.55□□□□□ -2.16
KNTC1-213ENST00000542727 AANATQ16613 207 aa1.55□□□□□ -2.16
KNTC1-213ENST00000542727 MAPK6Q16659 721 aa1.55□□□□□ -2.16
KNTC1-213ENST00000542727 CDKN3Q16667 212 aa1.55□□□□□ -2.16
KNTC1-213ENST00000542727 DCST2Q5T1A1 773 aa1.55□□□□□ -2.16
KNTC1-213ENST00000542727 ATF7IP2Q5U623 682 aa1.55□□□□□ -2.16
KNTC1-213ENST00000542727 SULT1C3Q6IMI6 304 aa1.55□□□□□ -2.16
KNTC1-213ENST00000542727 CXCL17Q6UXB2 119 aa1.55□□□□□ -2.16
KNTC1-213ENST00000542727 DNM1P46Q6ZS02 220 aa1.55□□□□□ -2.16
KNTC1-213ENST00000542727 TMEM110Q86TL2 294 aa1.55□□□□□ -2.16
KNTC1-213ENST00000542727 MISPQ8IVT2 679 aa1.55□□□□□ -2.16
KNTC1-213ENST00000542727 CERS5Q8N5B7 392 aa1.55□□□□□ -2.16
KNTC1-213ENST00000542727 ALLCQ8N6M5 410 aa1.55□□□□□ -2.16
KNTC1-213ENST00000542727 DCAF4L2Q8NA75 395 aa1.55□□□□□ -2.16
KNTC1-213ENST00000542727 MINDY2Q8NBR6 621 aa1.55□□□□□ -2.16
KNTC1-213ENST00000542727 ANKRD20A12PQ8NF67 263 aa1.55□□□□□ -2.16
KNTC1-213ENST00000542727 BBS1Q8NFJ9 593 aa1.55□□□□□ -2.16
KNTC1-213ENST00000542727 OR52B4Q8NGK2 314 aa1.55□□□□□ -2.16
KNTC1-213ENST00000542727 M1APQ8TC57 530 aa1.55□□□□□ -2.16
KNTC1-213ENST00000542727 DQX1Q8TE96 717 aaKnown RBP1.55□□□□□ -2.16
KNTC1-213ENST00000542727 IL1F10Q8WWZ1 152 aa1.55□□□□□ -2.16
KNTC1-213ENST00000542727 ELSPBP1Q96BH3 223 aa1.55□□□□□ -2.16
KNTC1-213ENST00000542727 PINX1Q96BK5 328 aaKnown RBP1.55□□□□□ -2.16
KNTC1-213ENST00000542727 ZNF799Q96GE5 643 aa1.55□□□□□ -2.16
KNTC1-213ENST00000542727 FAM111AQ96PZ2 611 aa1.55□□□□□ -2.16
KNTC1-213ENST00000542727 OR5B2Q96R09 309 aa1.55□□□□□ -2.16
KNTC1-213ENST00000542727 PLEKHF1Q96S99 279 aa1.55□□□□□ -2.16
KNTC1-213ENST00000542727 GSDMCQ9BYG8 508 aa1.55□□□□□ -2.16
KNTC1-213ENST00000542727 SLC25A51Q9H1U9 297 aa1.55□□□□□ -2.16
KNTC1-213ENST00000542727 GLIPR2Q9H4G4 154 aa1.55□□□□□ -2.16
KNTC1-213ENST00000542727 CD274Q9NZQ7 290 aa1.55□□□□□ -2.16
KNTC1-213ENST00000542727 SAMD4AQ9UPU9 718 aaKnown RBP1.55□□□□□ -2.16
KNTC1-213ENST00000542727 FOXJ3Q9UPW0 622 aa1.55□□□□□ -2.16
KNTC1-213ENST00000542727 MGAT4BQ9UQ53 548 aa1.55□□□□□ -2.16
KNTC1-213ENST00000542727 EIF3LQ9Y262 564 aaKnown RBP1.55□□□□□ -2.16
KNTC1-213ENST00000542727 MAB21L2Q9Y586 359 aa1.55□□□□□ -2.16
KNTC1-213ENST00000542727 AP4B1Q9Y6B7 739 aa1.55□□□□□ -2.16
KNTC1-213ENST00000542727 MTCL1Q9Y4B5 1905 aaKnown RBP1.55□□□□□ -2.16
KNTC1-213ENST00000542727 CCDC7Q96M83 1385 aa1.55□□□□□ -2.16
KNTC1-213ENST00000542727 USP27XA6NNY8 438 aa1.54□□□□□ -2.16
KNTC1-213ENST00000542727 H3BMQ9 156 aa1.54□□□□□ -2.16
KNTC1-213ENST00000542727 PANO1I0J062 215 aa1.54□□□□□ -2.16
KNTC1-213ENST00000542727 KIF2AO00139 706 aaPredicted RBP1.54□□□□□ -2.16
KNTC1-213ENST00000542727 RASGRF2O14827 1237 aa1.54□□□□□ -2.16
KNTC1-213ENST00000542727 DUX1O43812 170 aa1.54□□□□□ -2.16
KNTC1-213ENST00000542727 ZNF861PO60384 105 aa1.54□□□□□ -2.16
KNTC1-213ENST00000542727 VPS26AO75436 327 aa1.54□□□□□ -2.16
KNTC1-213ENST00000542727 LYPLA1O75608 230 aaPredicted RBP1.54□□□□□ -2.16
KNTC1-213ENST00000542727 SUPT7LO94864 414 aa1.54□□□□□ -2.16
KNTC1-213ENST00000542727 TIMP1P01033 207 aa1.54□□□□□ -2.16
KNTC1-213ENST00000542727 SEMG1P04279 462 aa1.54□□□□□ -2.16
KNTC1-213ENST00000542727 HPNP05981 417 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms