RNA–Protein interactions for RNA: ENST00000542449.1

LINC02417-201, Transcript of long intergenic non-protein coding RNA 2417, humanhuman

TSL 2 BASIC

Gene LINC02417, Length 515 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02417-201ENST00000542449 HOXB13Q92826 284 aaPredicted RBP12.98□□□□□ -0.33
LINC02417-201ENST00000542449 CDS1Q92903 461 aa12.98□□□□□ -0.33
LINC02417-201ENST00000542449 HGDQ93099 445 aa12.98□□□□□ -0.33
LINC02417-201ENST00000542449 EFHD2Q96C19 240 aaPredicted RBP12.98□□□□□ -0.33
LINC02417-201ENST00000542449 SLC35A4Q96G79 324 aa12.98□□□□□ -0.33
LINC02417-201ENST00000542449 TMEM41AQ96HV5 264 aa12.98□□□□□ -0.33
LINC02417-201ENST00000542449 BTBD9Q96Q07 612 aa12.98□□□□□ -0.33
LINC02417-201ENST00000542449 THTPAQ9BU02 230 aa12.98□□□□□ -0.33
LINC02417-201ENST00000542449 LRMDAQ9H2I8 198 aa12.98□□□□□ -0.33
LINC02417-201ENST00000542449 PIGUQ9H490 435 aa12.98□□□□□ -0.33
LINC02417-201ENST00000542449 KAT8Q9H7Z6 458 aaKnown RBP12.98□□□□□ -0.33
LINC02417-201ENST00000542449 GALNT9Q9HCQ5 603 aa12.98□□□□□ -0.33
LINC02417-201ENST00000542449 ACKR4Q9NPB9 350 aa12.98□□□□□ -0.33
LINC02417-201ENST00000542449 TMEM181Q9P2C4 612 aa12.98□□□□□ -0.33
LINC02417-201ENST00000542449 ABCD2Q9UBJ2 740 aa12.98□□□□□ -0.33
LINC02417-201ENST00000542449 MRTO4Q9UKD2 239 aaKnown RBP12.98□□□□□ -0.33
LINC02417-201ENST00000542449 USP22Q9UPT9 525 aa12.98□□□□□ -0.33
LINC02417-201ENST00000542449 C15orf41Q9Y2V0 281 aa12.98□□□□□ -0.33
LINC02417-201ENST00000542449 KCNE3Q9Y6H6 103 aa12.98□□□□□ -0.33
LINC02417-201ENST00000542449 SVILO95425 2214 aa12.98□□□□□ -0.33
LINC02417-201ENST00000542449 FLNBO75369 2602 aaKnown RBP12.97□□□□□ -0.33
LINC02417-201ENST00000542449 GXYLT2A0PJZ3 443 aa12.97□□□□□ -0.33
LINC02417-201ENST00000542449 OR6C70A6NIJ9 312 aa12.97□□□□□ -0.33
LINC02417-201ENST00000542449 TTC36A6NLP5 189 aa12.97□□□□□ -0.33
LINC02417-201ENST00000542449 HMGN4O00479 90 aa12.97□□□□□ -0.33
LINC02417-201ENST00000542449 HNRNPRO43390 633 aaKnown RBP12.97□□□□□ -0.33
LINC02417-201ENST00000542449 TNFRSF21O75509 655 aa12.97□□□□□ -0.33
LINC02417-201ENST00000542449 DNAJC8O75937 253 aaPredicted RBP12.97□□□□□ -0.33
LINC02417-201ENST00000542449 NKX2-2O95096 273 aa12.97□□□□□ -0.33
LINC02417-201ENST00000542449 ELAVL4P26378 380 aaKnown RBP12.97□□□□□ -0.33
LINC02417-201ENST00000542449 GRNP28799 593 aaKnown RBP12.97□□□□□ -0.33
LINC02417-201ENST00000542449 MAP3K8P41279 467 aa12.97□□□□□ -0.33
LINC02417-201ENST00000542449 MAGEA8P43361 318 aa12.97□□□□□ -0.33
LINC02417-201ENST00000542449 EEFSECP57772 596 aaKnown RBP12.97□□□□□ -0.33
LINC02417-201ENST00000542449 TXNL4AP83876 142 aaKnown RBP12.97□□□□□ -0.33
LINC02417-201ENST00000542449 SNTA1Q13424 505 aa12.97□□□□□ -0.33
LINC02417-201ENST00000542449 DECR1Q16698 335 aa12.97□□□□□ -0.33
LINC02417-201ENST00000542449 EMC4Q5J8M3 183 aa12.97□□□□□ -0.33
LINC02417-201ENST00000542449 COX18Q8N8Q8 333 aa12.97□□□□□ -0.33
LINC02417-201ENST00000542449 OR4N2Q8NGD1 307 aa12.97□□□□□ -0.33
LINC02417-201ENST00000542449 ASB5Q8WWX0 329 aa12.97□□□□□ -0.33
LINC02417-201ENST00000542449 MARVELD3Q96A59 401 aa12.97□□□□□ -0.33
LINC02417-201ENST00000542449 STACQ99469 402 aa12.97□□□□□ -0.33
LINC02417-201ENST00000542449 Q9N2J8 555 aa12.97□□□□□ -0.33
LINC02417-201ENST00000542449 PRPF19Q9UMS4 504 aaKnown RBP12.97□□□□□ -0.33
LINC02417-201ENST00000542449 AP3M1Q9Y2T2 418 aa12.97□□□□□ -0.33
LINC02417-201ENST00000542449 SLC6A5Q9Y345 797 aa12.97□□□□□ -0.33
LINC02417-201ENST00000542449 POLEQ07864 2286 aa12.97□□□□□ -0.33
LINC02417-201ENST00000542449 ZGRF1Q86YA3 2104 aa12.97□□□□□ -0.33
LINC02417-201ENST00000542449 DUXAA6NLW8 204 aa12.96□□□□□ -0.33
LINC02417-201ENST00000542449 FAM220BPB1ANY3 271 aa12.96□□□□□ -0.33
LINC02417-201ENST00000542449 GSC2O15499 205 aa12.96□□□□□ -0.33
LINC02417-201ENST00000542449 WDR1O75083 606 aa12.96□□□□□ -0.33
LINC02417-201ENST00000542449 CBR3O75828 277 aa12.96□□□□□ -0.33
LINC02417-201ENST00000542449 PDE5AO76074 875 aa12.96□□□□□ -0.33
LINC02417-201ENST00000542449 AGR2O95994 175 aa12.96□□□□□ -0.33
LINC02417-201ENST00000542449 HOXD4P09016 255 aaPredicted RBP12.96□□□□□ -0.33
LINC02417-201ENST00000542449 BMP2P12643 396 aa12.96□□□□□ -0.33
LINC02417-201ENST00000542449 COX6B1P14854 86 aa12.96□□□□□ -0.33
LINC02417-201ENST00000542449 GABRA1P14867 456 aa12.96□□□□□ -0.33
LINC02417-201ENST00000542449 CLK3P49761 638 aaKnown RBP12.96□□□□□ -0.33
LINC02417-201ENST00000542449 GSK3BP49841 420 aa12.96□□□□□ -0.33
LINC02417-201ENST00000542449 GZMMP51124 257 aa12.96□□□□□ -0.33
LINC02417-201ENST00000542449 PNLIPRP2P54317 469 aa12.96□□□□□ -0.33
LINC02417-201ENST00000542449 NUP107P57740 925 aa12.96□□□□□ -0.33
LINC02417-201ENST00000542449 CYP27C1Q4G0S4 372 aa12.96□□□□□ -0.33
LINC02417-201ENST00000542449 WIPI1Q5MNZ9 446 aaPredicted RBP12.96□□□□□ -0.33
LINC02417-201ENST00000542449 SAMD4BQ5PRF9 694 aaKnown RBP12.96□□□□□ -0.33
LINC02417-201ENST00000542449 ATAD3BQ5T9A4 648 aa12.96□□□□□ -0.33
LINC02417-201ENST00000542449 B3GNT6Q6ZMB0 384 aa12.96□□□□□ -0.33
LINC02417-201ENST00000542449 C16orf62Q7Z3J2 963 aa12.96□□□□□ -0.33
LINC02417-201ENST00000542449 SERPINA11Q86U17 422 aa12.96□□□□□ -0.33
LINC02417-201ENST00000542449 YRDCQ86U90 279 aaKnown RBP12.96□□□□□ -0.33
LINC02417-201ENST00000542449 CALHM3Q86XJ0 350 aa12.96□□□□□ -0.33
LINC02417-201ENST00000542449 ZZZ3Q8IYH5 903 aa12.96□□□□□ -0.33
LINC02417-201ENST00000542449 RPRMLQ8N4K4 120 aa12.96□□□□□ -0.33
LINC02417-201ENST00000542449 MARVELD2Q8N4S9 558 aa12.96□□□□□ -0.33
LINC02417-201ENST00000542449 OR2T12Q8NG77 320 aa12.96□□□□□ -0.33
LINC02417-201ENST00000542449 OR14L1PQ8NHC6 308 aa12.96□□□□□ -0.33
LINC02417-201ENST00000542449 MAL2Q969L2 176 aa12.96□□□□□ -0.33
LINC02417-201ENST00000542449 MCUR1Q96AQ8 359 aa12.96□□□□□ -0.33
LINC02417-201ENST00000542449 DTNBP1Q96EV8 351 aa12.96□□□□□ -0.33
LINC02417-201ENST00000542449 RMND5BQ96G75 393 aaPredicted RBP12.96□□□□□ -0.33
LINC02417-201ENST00000542449 CLPTM1LQ96KA5 538 aa12.96□□□□□ -0.33
LINC02417-201ENST00000542449 ZNF583Q96ND8 569 aa12.96□□□□□ -0.33
LINC02417-201ENST00000542449 CADM1Q9BY67 442 aaKnown RBP12.96□□□□□ -0.33
LINC02417-201ENST00000542449 ALG2Q9H553 416 aa12.96□□□□□ -0.33
LINC02417-201ENST00000542449 DUSP22Q9NRW4 184 aa12.96□□□□□ -0.33
LINC02417-201ENST00000542449 EXD2Q9NVH0 621 aa12.96□□□□□ -0.33
LINC02417-201ENST00000542449 GIN1Q9NXP7 522 aa12.96□□□□□ -0.33
LINC02417-201ENST00000542449 SPRR3Q9UBC9 169 aa12.96□□□□□ -0.33
LINC02417-201ENST00000542449 CBLCQ9ULV8 474 aa12.96□□□□□ -0.33
LINC02417-201ENST00000542449 TMEM247A6NEH6 219 aa12.95□□□□□ -0.34
LINC02417-201ENST00000542449 PRORSD1PA6NEY8 169 aa12.95□□□□□ -0.34
LINC02417-201ENST00000542449 HPNP05981 417 aa12.95□□□□□ -0.34
LINC02417-201ENST00000542449 BCHEP06276 602 aa12.95□□□□□ -0.34
LINC02417-201ENST00000542449 ARAFP10398 606 aa12.95□□□□□ -0.34
LINC02417-201ENST00000542449 NR2F1P10589 423 aa12.95□□□□□ -0.34
LINC02417-201ENST00000542449 TCN1P20061 433 aaPredicted RBP12.95□□□□□ -0.34
LINC02417-201ENST00000542449 PGM1P36871 562 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms