RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 KLHDC8AQ8IYD2 350 aa14.1□□□□□ -0.15
SMARCA4-207ENST00000541122 CDRT4Q8N9R6 151 aa14.1□□□□□ -0.15
SMARCA4-207ENST00000541122 IRF7Q92985 503 aa14.1□□□□□ -0.15
SMARCA4-207ENST00000541122 MSLNLQ96KJ4 702 aa14.1□□□□□ -0.15
SMARCA4-207ENST00000541122 C4orf36Q96KX1 117 aa14.1□□□□□ -0.15
SMARCA4-207ENST00000541122 SAMD11Q96NU1 681 aa14.1□□□□□ -0.15
SMARCA4-207ENST00000541122 TMEM121BQ9BXQ6 578 aaPredicted RBP14.1□□□□□ -0.15
SMARCA4-207ENST00000541122 METTL7AQ9H8H3 244 aa14.1□□□□□ -0.15
SMARCA4-207ENST00000541122 RNF215Q9Y6U7 377 aa14.1□□□□□ -0.15
SMARCA4-207ENST00000541122 TMEM221A6NGB7 291 aa14.1□□□□□ -0.15
SMARCA4-207ENST00000541122 ZNF254O75437 659 aa14.1□□□□□ -0.15
SMARCA4-207ENST00000541122 RAB3AP20336 220 aa14.1□□□□□ -0.15
SMARCA4-207ENST00000541122 CTXN1P60606 82 aa14.1□□□□□ -0.15
SMARCA4-207ENST00000541122 ZNF169Q14929 603 aaPredicted RBP14.1□□□□□ -0.15
SMARCA4-207ENST00000541122 NKPD1Q17RQ9 610 aa14.1□□□□□ -0.15
SMARCA4-207ENST00000541122 C7orf61Q8IZ16 206 aa14.1□□□□□ -0.15
SMARCA4-207ENST00000541122 ZMYND19Q96E35 227 aaPredicted RBP14.1□□□□□ -0.15
SMARCA4-207ENST00000541122 IL17FQ96PD4 163 aa14.1□□□□□ -0.15
SMARCA4-207ENST00000541122 OR2M4Q96R27 311 aa14.1□□□□□ -0.15
SMARCA4-207ENST00000541122 ZNF840PA6NDX5 716 aa14.1□□□□□ -0.15
SMARCA4-207ENST00000541122 SULT1B1O43704 296 aa14.1□□□□□ -0.15
SMARCA4-207ENST00000541122 SDC3O75056 442 aa14.1□□□□□ -0.15
SMARCA4-207ENST00000541122 RNH1P13489 461 aaKnown RBP14.1□□□□□ -0.15
SMARCA4-207ENST00000541122 BEND4Q6ZU67 534 aa14.1□□□□□ -0.15
SMARCA4-207ENST00000541122 ZNF619Q8N2I2 560 aa14.1□□□□□ -0.15
SMARCA4-207ENST00000541122 EID2Q8N6I1 236 aa14.1□□□□□ -0.15
SMARCA4-207ENST00000541122 SLAIN1Q8ND83 568 aa14.1□□□□□ -0.15
SMARCA4-207ENST00000541122 PXT1Q8NFP0 134 aa14.1□□□□□ -0.15
SMARCA4-207ENST00000541122 OR10K1Q8NGX5 313 aa14.1□□□□□ -0.15
SMARCA4-207ENST00000541122 SCARB1Q8WTV0 552 aa14.1□□□□□ -0.15
SMARCA4-207ENST00000541122 IL26Q9NPH9 171 aa14.1□□□□□ -0.15
SMARCA4-207ENST00000541122 TLR9Q9NR96 1032 aa14.1□□□□□ -0.15
SMARCA4-207ENST00000541122 C19orf12Q9NSK7 152 aa14.1□□□□□ -0.15
SMARCA4-207ENST00000541122 OR1A2Q9Y585 309 aa14.1□□□□□ -0.15
SMARCA4-207ENST00000541122 RFXAPO00287 272 aa14.09□□□□□ -0.15
SMARCA4-207ENST00000541122 IDUAP35475 653 aa14.09□□□□□ -0.15
SMARCA4-207ENST00000541122 CAMK2DQ13557 499 aa14.09□□□□□ -0.15
SMARCA4-207ENST00000541122 KDM4DQ6B0I6 523 aa14.09□□□□□ -0.15
SMARCA4-207ENST00000541122 FAM122BQ7Z309 247 aa14.09□□□□□ -0.15
SMARCA4-207ENST00000541122 DPF3Q92784 378 aa14.09□□□□□ -0.15
SMARCA4-207ENST00000541122 SLC39A13Q96H72 371 aa14.09□□□□□ -0.15
SMARCA4-207ENST00000541122 MICU1Q9BPX6 476 aa14.09□□□□□ -0.15
SMARCA4-207ENST00000541122 LSM5Q9Y4Y9 91 aaKnown RBP14.09□□□□□ -0.15
SMARCA4-207ENST00000541122 MYH1P12882 1939 aa14.09□□□□□ -0.15
SMARCA4-207ENST00000541122 MYH4Q9Y623 1939 aa14.09□□□□□ -0.15
SMARCA4-207ENST00000541122 TRDV1A0A1B0GX56 115 aa14.09□□□□□ -0.15
SMARCA4-207ENST00000541122 A0A1W2PS29 197 aa14.09□□□□□ -0.15
SMARCA4-207ENST00000541122 SOD2P04179 222 aa14.09□□□□□ -0.15
SMARCA4-207ENST00000541122 PNMTP11086 282 aa14.09□□□□□ -0.15
SMARCA4-207ENST00000541122 S100A11P31949 105 aa14.09□□□□□ -0.15
SMARCA4-207ENST00000541122 LIPAP38571 399 aa14.09□□□□□ -0.15
SMARCA4-207ENST00000541122 SGSHP51688 502 aa14.09□□□□□ -0.15
SMARCA4-207ENST00000541122 SGCBQ16585 318 aa14.09□□□□□ -0.15
SMARCA4-207ENST00000541122 ARHGAP40Q5TG30 622 aa14.09□□□□□ -0.15
SMARCA4-207ENST00000541122 UBTD2Q8WUN7 234 aa14.09□□□□□ -0.15
SMARCA4-207ENST00000541122 AUTS2Q8WXX7 1259 aa14.09□□□□□ -0.15
SMARCA4-207ENST00000541122 OR8D2Q9GZM6 311 aa14.09□□□□□ -0.15
SMARCA4-207ENST00000541122 TSPAN10Q9H1Z9 355 aaPredicted RBP14.09□□□□□ -0.15
SMARCA4-207ENST00000541122 FANCFQ9NPI8 374 aa14.09□□□□□ -0.15
SMARCA4-207ENST00000541122 C19orf25Q9UFG5 118 aaPredicted RBP14.09□□□□□ -0.15
SMARCA4-207ENST00000541122 JUNDP17535 347 aa14.09□□□□□ -0.15
SMARCA4-207ENST00000541122 POLR2IP36954 125 aaKnown RBP14.09□□□□□ -0.15
SMARCA4-207ENST00000541122 RPS25P62851 125 aaKnown RBP14.09□□□□□ -0.15
SMARCA4-207ENST00000541122 SORDQ00796 357 aa14.09□□□□□ -0.15
SMARCA4-207ENST00000541122 CRHR2Q13324 411 aa14.09□□□□□ -0.15
SMARCA4-207ENST00000541122 MFSD13AQ14CX5 517 aa14.09□□□□□ -0.15
SMARCA4-207ENST00000541122 DEFB134Q4QY38 66 aa14.09□□□□□ -0.15
SMARCA4-207ENST00000541122 RTL6Q6ICC9 239 aa14.09□□□□□ -0.15
SMARCA4-207ENST00000541122 MFSD6LQ8IWD5 586 aa14.09□□□□□ -0.15
SMARCA4-207ENST00000541122 SLC35F3Q8IY50 421 aa14.09□□□□□ -0.15
SMARCA4-207ENST00000541122 ZSCAN4Q8NAM6 433 aaPredicted RBP14.09□□□□□ -0.15
SMARCA4-207ENST00000541122 OCEL1Q9H607 264 aa14.09□□□□□ -0.15
SMARCA4-207ENST00000541122 APEX1P27695 318 aaKnown RBP14.09□□□□□ -0.15
SMARCA4-207ENST00000541122 PSPHP78330 225 aa14.09□□□□□ -0.15
SMARCA4-207ENST00000541122 FLI1Q01543 452 aaPredicted RBP14.09□□□□□ -0.15
SMARCA4-207ENST00000541122 BCL2A1Q16548 175 aa14.09□□□□□ -0.15
SMARCA4-207ENST00000541122 RELTQ969Z4 430 aa14.09□□□□□ -0.15
SMARCA4-207ENST00000541122 GSX2Q9BZM3 304 aa14.09□□□□□ -0.15
SMARCA4-207ENST00000541122 OR52D1Q9H346 318 aa14.09□□□□□ -0.15
SMARCA4-207ENST00000541122 C2orf42Q9NWW7 574 aa14.09□□□□□ -0.15
SMARCA4-207ENST00000541122 FBXL12Q9NXK8 326 aa14.09□□□□□ -0.15
SMARCA4-207ENST00000541122 DRGXA6NNA5 263 aa14.08□□□□□ -0.15
SMARCA4-207ENST00000541122 SNRNP70P08621 437 aaKnown RBP14.08□□□□□ -0.15
SMARCA4-207ENST00000541122 PIPP12273 146 aaPredicted RBP14.08□□□□□ -0.15
SMARCA4-207ENST00000541122 GDNFP39905 211 aa14.08□□□□□ -0.15
SMARCA4-207ENST00000541122 SLC1A3P43003 542 aa14.08□□□□□ -0.15
SMARCA4-207ENST00000541122 RAB28P51157 221 aa14.08□□□□□ -0.15
SMARCA4-207ENST00000541122 ISL1P61371 349 aa14.08□□□□□ -0.15
SMARCA4-207ENST00000541122 LY6G5CQ5SRR4 150 aa14.08□□□□□ -0.15
SMARCA4-207ENST00000541122 IL21RQ9HBE5 538 aa14.08□□□□□ -0.15
SMARCA4-207ENST00000541122 IL20RAQ9UHF4 553 aa14.08□□□□□ -0.15
SMARCA4-207ENST00000541122 CAMK2AQ9UQM7 478 aa14.08□□□□□ -0.15
SMARCA4-207ENST00000541122 SLC35A2P78381 396 aa14.08□□□□□ -0.16
SMARCA4-207ENST00000541122 PRKCZQ05513 592 aa14.08□□□□□ -0.16
SMARCA4-207ENST00000541122 FIGNL1Q6PIW4 674 aa14.08□□□□□ -0.16
SMARCA4-207ENST00000541122 MAMDC4Q6UXC1 1216 aa14.08□□□□□ -0.16
SMARCA4-207ENST00000541122 PIANPQ8IYJ0 282 aa14.08□□□□□ -0.16
SMARCA4-207ENST00000541122 REM2Q8IYK8 340 aaPredicted RBP14.08□□□□□ -0.16
SMARCA4-207ENST00000541122 RNF128Q8TEB7 428 aa14.08□□□□□ -0.16
SMARCA4-207ENST00000541122 SLC35B4Q969S0 331 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms