RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 LCN1P31025 176 aa23.86■■□□□ 1.41
CHFR-218ENST00000540963 CDKN1AP38936 164 aa23.86■■□□□ 1.41
CHFR-218ENST00000540963 MAP3K8P41279 467 aa23.86■■□□□ 1.41
CHFR-218ENST00000540963 ZNF41P51814 821 aaPredicted RBP23.86■■□□□ 1.41
CHFR-218ENST00000540963 P2RY6Q15077 328 aa23.86■■□□□ 1.41
CHFR-218ENST00000540963 VPS26BQ4G0F5 336 aa23.86■■□□□ 1.41
CHFR-218ENST00000540963 TMEM201Q5SNT2 666 aa23.86■■□□□ 1.41
CHFR-218ENST00000540963 TFAP2EQ6VUC0 442 aa23.86■■□□□ 1.41
CHFR-218ENST00000540963 TRABD2AQ86V40 505 aa23.86■■□□□ 1.41
CHFR-218ENST00000540963 MISPQ8IVT2 679 aa23.86■■□□□ 1.41
CHFR-218ENST00000540963 OSTF1Q92882 214 aa23.86■■□□□ 1.41
CHFR-218ENST00000540963 REXO5Q96IC2 774 aaKnown RBP23.86■■□□□ 1.41
CHFR-218ENST00000540963 TMEM237Q96Q45 408 aa23.86■■□□□ 1.41
CHFR-218ENST00000540963 MED17Q9NVC6 651 aa23.86■■□□□ 1.41
CHFR-218ENST00000540963 TRIM49D1C9J1S8 452 aa23.85■■□□□ 1.41
CHFR-218ENST00000540963 POC1B-GALNT4F8VUJ3 575 aa23.85■■□□□ 1.41
CHFR-218ENST00000540963 IGKV1D-16P01601 117 aa23.85■■□□□ 1.41
CHFR-218ENST00000540963 FAM157CP0CG43 387 aa23.85■■□□□ 1.41
CHFR-218ENST00000540963 CARD18P57730 90 aa23.85■■□□□ 1.41
CHFR-218ENST00000540963 LCP2Q13094 533 aa23.85■■□□□ 1.41
CHFR-218ENST00000540963 TAB1Q15750 504 aa23.85■■□□□ 1.41
CHFR-218ENST00000540963 PGGHGQ32M88 737 aa23.85■■□□□ 1.41
CHFR-218ENST00000540963 TEX35Q5T0J7 233 aa23.85■■□□□ 1.41
CHFR-218ENST00000540963 IKBIPQ70UQ0 350 aa23.85■■□□□ 1.41
CHFR-218ENST00000540963 SSX8Q7RTT4 187 aa23.85■■□□□ 1.41
CHFR-218ENST00000540963 LCA5Q86VQ0 697 aa23.85■■□□□ 1.41
CHFR-218ENST00000540963 PIWIL2Q8TC59 973 aaKnown RBP23.85■■□□□ 1.41
CHFR-218ENST00000540963 SLC9A6Q92581 669 aa23.85■■□□□ 1.41
CHFR-218ENST00000540963 CPNE4Q96A23 557 aaPredicted RBP23.85■■□□□ 1.41
CHFR-218ENST00000540963 KLHL15Q96M94 604 aa23.85■■□□□ 1.41
CHFR-218ENST00000540963 HS6ST2Q96MM7 605 aa23.85■■□□□ 1.41
CHFR-218ENST00000540963 RNF145Q96MT1 663 aa23.85■■□□□ 1.41
CHFR-218ENST00000540963 POTEKPQ9BYX7 375 aa23.85■■□□□ 1.41
CHFR-218ENST00000540963 TSPYL1Q9H0U9 437 aa23.85■■□□□ 1.41
CHFR-218ENST00000540963 TIGARQ9NQ88 270 aa23.85■■□□□ 1.41
CHFR-218ENST00000540963 GXYLT2A0PJZ3 443 aa23.84■■□□□ 1.41
CHFR-218ENST00000540963 NKX2-2O95096 273 aa23.84■■□□□ 1.41
CHFR-218ENST00000540963 OXSR1O95747 527 aaPredicted RBP23.84■■□□□ 1.41
CHFR-218ENST00000540963 EIF1P41567 113 aaKnown RBP23.84■■□□□ 1.41
CHFR-218ENST00000540963 SLC18A2Q05940 514 aa23.84■■□□□ 1.41
CHFR-218ENST00000540963 BTKQ06187 659 aa23.84■■□□□ 1.41
CHFR-218ENST00000540963 ZNF239Q16600 458 aaKnown RBP23.84■■□□□ 1.41
CHFR-218ENST00000540963 NRF1Q16656 503 aa23.84■■□□□ 1.41
CHFR-218ENST00000540963 GLE1Q53GS7 698 aaKnown RBP23.84■■□□□ 1.41
CHFR-218ENST00000540963 SPDYAQ5MJ70 313 aa23.84■■□□□ 1.41
CHFR-218ENST00000540963 DTX2Q86UW9 622 aa23.84■■□□□ 1.41
CHFR-218ENST00000540963 OR4C3Q8NH37 302 aa23.84■■□□□ 1.41
CHFR-218ENST00000540963 GPR151Q8TDV0 419 aa23.84■■□□□ 1.41
CHFR-218ENST00000540963 TRIM2Q9C040 744 aa23.84■■□□□ 1.41
CHFR-218ENST00000540963 ALG2Q9H553 416 aa23.84■■□□□ 1.41
CHFR-218ENST00000540963 FAIMQ9NVQ4 179 aa23.84■■□□□ 1.41
CHFR-218ENST00000540963 KLHL13Q9P2N7 655 aa23.84■■□□□ 1.41
CHFR-218ENST00000540963 ADAM11O75078 769 aa23.83■■□□□ 1.41
CHFR-218ENST00000540963 PRPS2P11908 318 aa23.83■■□□□ 1.41
CHFR-218ENST00000540963 ATP5F1P24539 256 aaPredicted RBP23.83■■□□□ 1.41
CHFR-218ENST00000540963 ELK4P28324 431 aa23.83■■□□□ 1.41
CHFR-218ENST00000540963 ALKBH2Q6NS38 261 aa23.83■■□□□ 1.41
CHFR-218ENST00000540963 TDRPQ86YL5 185 aa23.83■■□□□ 1.41
CHFR-218ENST00000540963 SLC22A9Q8IVM8 553 aa23.83■■□□□ 1.41
CHFR-218ENST00000540963 CDRT4Q8N9R6 151 aa23.83■■□□□ 1.41
CHFR-218ENST00000540963 CDC26Q8NHZ8 85 aa23.83■■□□□ 1.41
CHFR-218ENST00000540963 PIK3R3Q92569 461 aa23.83■■□□□ 1.41
CHFR-218ENST00000540963 KISS1RQ969F8 398 aaPredicted RBP23.83■■□□□ 1.41
CHFR-218ENST00000540963 NPAS1Q99742 590 aa23.83■■□□□ 1.41
CHFR-218ENST00000540963 TRAF4Q9BUZ4 470 aaPredicted RBP23.83■■□□□ 1.41
CHFR-218ENST00000540963 CDC42EP3Q9UKI2 254 aa23.83■■□□□ 1.41
CHFR-218ENST00000540963 DLX3O60479 287 aa23.82■■□□□ 1.4
CHFR-218ENST00000540963 ITGADQ13349 1161 aa23.82■■□□□ 1.4
CHFR-218ENST00000540963 SEZ6L2Q6UXD5 910 aa23.82■■□□□ 1.4
CHFR-218ENST00000540963 LILRA2Q8N149 483 aa23.82■■□□□ 1.4
CHFR-218ENST00000540963 OR6Y1Q8NGX8 325 aa23.82■■□□□ 1.4
CHFR-218ENST00000540963 CEP70Q8NHQ1 597 aa23.82■■□□□ 1.4
CHFR-218ENST00000540963 FAM110BQ8TC76 370 aa23.82■■□□□ 1.4
CHFR-218ENST00000540963 ABHD3Q8WU67 409 aa23.82■■□□□ 1.4
CHFR-218ENST00000540963 ROBO4Q8WZ75 1007 aa23.82■■□□□ 1.4
CHFR-218ENST00000540963 NEUROG1Q92886 237 aa23.82■■□□□ 1.4
CHFR-218ENST00000540963 L3HYPDHQ96EM0 354 aa23.82■■□□□ 1.4
CHFR-218ENST00000540963 RHNO1Q9BSD3 238 aa23.82■■□□□ 1.4
CHFR-218ENST00000540963 IQCGQ9H095 443 aaKnown RBP23.82■■□□□ 1.4
CHFR-218ENST00000540963 L2HGDHQ9H9P8 463 aa23.82■■□□□ 1.4
CHFR-218ENST00000540963 TIMM22Q9Y584 194 aa23.82■■□□□ 1.4
CHFR-218ENST00000540963 YLPM1P49750 1951 aaKnown RBP23.82■■□□□ 1.4
CHFR-218ENST00000540963 A0A1W2PQD3 144 aa23.81■■□□□ 1.4
CHFR-218ENST00000540963 PHF1O43189 567 aaPredicted RBP23.81■■□□□ 1.4
CHFR-218ENST00000540963 OPN1LWP04000 364 aa23.81■■□□□ 1.4
CHFR-218ENST00000540963 SNRPAP09012 282 aaKnown RBP23.81■■□□□ 1.4
CHFR-218ENST00000540963 PRKAA2P54646 552 aa23.81■■□□□ 1.4
CHFR-218ENST00000540963 BSPH1Q075Z2 132 aa23.81■■□□□ 1.4
CHFR-218ENST00000540963 FAPQ12884 760 aa23.81■■□□□ 1.4
CHFR-218ENST00000540963 MNS1Q8NEH6 495 aa23.81■■□□□ 1.4
CHFR-218ENST00000540963 KBTBD8Q8NFY9 601 aa23.81■■□□□ 1.4
CHFR-218ENST00000540963 POC1BQ8TC44 478 aa23.81■■□□□ 1.4
CHFR-218ENST00000540963 ZNF764Q96H86 408 aaPredicted RBP23.81■■□□□ 1.4
CHFR-218ENST00000540963 METTL2AQ96IZ6 378 aaKnown RBP23.81■■□□□ 1.4
CHFR-218ENST00000540963 TMEM185BQ9H7F4 350 aa23.81■■□□□ 1.4
CHFR-218ENST00000540963 UBQLN4Q9NRR5 601 aa23.81■■□□□ 1.4
CHFR-218ENST00000540963 TMEM160Q9NX00 188 aa23.81■■□□□ 1.4
CHFR-218ENST00000540963 NTMQ9P121 344 aa23.81■■□□□ 1.4
CHFR-218ENST00000540963 NBEAL1Q6ZS30 2694 aa23.81■■□□□ 1.4
CHFR-218ENST00000540963 A0A087WUV0 522 aaPredicted RBP23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms