RNA–Protein interactions for RNA: ENST00000540447.5

YBX3-208, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 6,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-208ENST00000540447 FAM74A1Q5RGS3 127 aa8.28□□□□□ -1.08
YBX3-208ENST00000540447 CHADLQ6NUI6 762 aa8.28□□□□□ -1.08
YBX3-208ENST00000540447 FIP1L1Q6UN15 594 aaKnown RBP8.28□□□□□ -1.08
YBX3-208ENST00000540447 GPR135Q8IZ08 494 aa8.28□□□□□ -1.08
YBX3-208ENST00000540447 OR56B1Q8NGI3 324 aa8.28□□□□□ -1.08
YBX3-208ENST00000540447 DNAJA3Q96EY1 480 aa8.28□□□□□ -1.08
YBX3-208ENST00000540447 C1orf74Q96LT6 269 aa8.28□□□□□ -1.08
YBX3-208ENST00000540447 CD244Q9BZW8 370 aa8.28□□□□□ -1.08
YBX3-208ENST00000540447 RLIMQ9NVW2 624 aa8.28□□□□□ -1.08
YBX3-208ENST00000540447 K7ERU9 68 aa8.28□□□□□ -1.08
YBX3-208ENST00000540447 ACOT8O14734 319 aa8.28□□□□□ -1.08
YBX3-208ENST00000540447 PMM2O15305 246 aa8.28□□□□□ -1.08
YBX3-208ENST00000540447 INSIG1O15503 277 aa8.28□□□□□ -1.08
YBX3-208ENST00000540447 ADH1BP00325 375 aa8.28□□□□□ -1.08
YBX3-208ENST00000540447 SOX9P48436 509 aa8.28□□□□□ -1.08
YBX3-208ENST00000540447 LCN6P62502 163 aa8.28□□□□□ -1.08
YBX3-208ENST00000540447 OR13C9Q8NGT0 318 aa8.28□□□□□ -1.08
YBX3-208ENST00000540447 CXorf40AQ8TE69 158 aa8.28□□□□□ -1.08
YBX3-208ENST00000540447 CREB3L4Q8TEY5 395 aa8.28□□□□□ -1.08
YBX3-208ENST00000540447 TIMM29Q9BSF4 260 aa8.28□□□□□ -1.08
YBX3-208ENST00000540447 EFCAB11Q9BUY7 163 aa8.28□□□□□ -1.08
YBX3-208ENST00000540447 CDCP1Q9H5V8 836 aa8.28□□□□□ -1.08
YBX3-208ENST00000540447 BET1LQ9NYM9 111 aa8.28□□□□□ -1.08
YBX3-208ENST00000540447 ARL2-SNX15V9GYD0 113 aa8.28□□□□□ -1.08
YBX3-208ENST00000540447 CAMSAP1Q5T5Y3 1602 aa8.28□□□□□ -1.08
YBX3-208ENST00000540447 SLC25A27O95847 323 aa8.28□□□□□ -1.08
YBX3-208ENST00000540447 FGF4P08620 206 aa8.28□□□□□ -1.08
YBX3-208ENST00000540447 MGMTP16455 207 aa8.28□□□□□ -1.08
YBX3-208ENST00000540447 CMPK1P30085 196 aa8.28□□□□□ -1.08
YBX3-208ENST00000540447 CLDN6P56747 220 aa8.28□□□□□ -1.08
YBX3-208ENST00000540447 ITPK1Q13572 414 aa8.28□□□□□ -1.08
YBX3-208ENST00000540447 ALKBH1Q13686 389 aaKnown RBP8.28□□□□□ -1.08
YBX3-208ENST00000540447 SLC9A3R2Q15599 337 aa8.28□□□□□ -1.08
YBX3-208ENST00000540447 OR2B11Q5JQS5 317 aa8.28□□□□□ -1.08
YBX3-208ENST00000540447 KCTD11Q693B1 232 aa8.28□□□□□ -1.08
YBX3-208ENST00000540447 OR1S1Q8NH92 325 aa8.28□□□□□ -1.08
YBX3-208ENST00000540447 HHIPL1Q96JK4 782 aa8.28□□□□□ -1.08
YBX3-208ENST00000540447 KANSL3Q9P2N6 904 aa8.28□□□□□ -1.08
YBX3-208ENST00000540447 TMEM14AQ9Y6G1 99 aa8.28□□□□□ -1.08
YBX3-208ENST00000540447 OR2AG2A6NM03 316 aa8.27□□□□□ -1.08
YBX3-208ENST00000540447 SEC14L6B5MCN3 397 aa8.27□□□□□ -1.08
YBX3-208ENST00000540447 NFKBIEO00221 500 aa8.27□□□□□ -1.08
YBX3-208ENST00000540447 PMS2P2O95744 297 aa8.27□□□□□ -1.08
YBX3-208ENST00000540447 CCR9P51686 369 aa8.27□□□□□ -1.08
YBX3-208ENST00000540447 GPR162Q16538 588 aa8.27□□□□□ -1.08
YBX3-208ENST00000540447 VRK3Q8IV63 474 aa8.27□□□□□ -1.08
YBX3-208ENST00000540447 CXorf40BQ96DE9 158 aa8.27□□□□□ -1.08
YBX3-208ENST00000540447 MRPL38Q96DV4 380 aaKnown RBP8.27□□□□□ -1.08
YBX3-208ENST00000540447 CDKN2AIPNLQ96HQ2 116 aa8.27□□□□□ -1.08
YBX3-208ENST00000540447 RSRP1Q9BUV0 290 aa8.27□□□□□ -1.08
YBX3-208ENST00000540447 C1QTNF7Q9BXJ2 289 aa8.27□□□□□ -1.08
YBX3-208ENST00000540447 DUS2Q9NX74 493 aaKnown RBP8.27□□□□□ -1.08
YBX3-208ENST00000540447 FBXO7Q9Y3I1 522 aa8.27□□□□□ -1.08
YBX3-208ENST00000540447 MYH6P13533 1939 aa8.27□□□□□ -1.08
YBX3-208ENST00000540447 GPR39O43194 453 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 SCO2O43819 266 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 ASGR1P07306 291 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 SNRPBP14678 240 aaKnown RBP8.27□□□□□ -1.09
YBX3-208ENST00000540447 IFNGR1P15260 489 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 CD1DP15813 335 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 POLR2IP36954 125 aaKnown RBP8.27□□□□□ -1.09
YBX3-208ENST00000540447 GPR4P46093 362 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 CPT1AP50416 773 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 SLC14A1Q13336 389 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 TMEM183BQ1AE95 376 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 NCMAPQ5T1S8 102 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 CYB5R2Q6BCY4 276 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 BTLAQ7Z6A9 289 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 TMEM145Q8NBT3 493 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 OR4K5Q8NGD3 323 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 TMED6Q8WW62 240 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 ALOXE3Q9BYJ1 711 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 FBXW11Q9UKB1 542 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 POMT2Q9UKY4 750 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 PCDHGC4Q9Y5F7 938 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 PCDHA9Q9Y5H5 950 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 CLTCL1P53675 1640 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 KDELR3O43731 214 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 DPM1O60762 260 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 YBEYP58557 167 aaPredicted RBP8.27□□□□□ -1.09
YBX3-208ENST00000540447 WDR5P61964 334 aaKnown RBP8.27□□□□□ -1.09
YBX3-208ENST00000540447 LIPJQ5W064 366 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 PET117Q6UWS5 81 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 LINGO4Q6UY18 593 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 FCRLAQ7L513 359 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 RGMAQ96B86 450 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 FAM46AQ96IP4 442 aaKnown RBP8.27□□□□□ -1.09
YBX3-208ENST00000540447 OR5M11Q96RB7 305 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 EDEM2Q9BV94 578 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 NSUN3Q9H649 340 aaKnown RBP8.27□□□□□ -1.09
YBX3-208ENST00000540447 C1GALT1Q9NS00 363 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 SLCO3A1Q9UIG8 710 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 TMX2Q9Y320 296 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 NPIPA5A0A0B4J1W7 369 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 OR6C68A6NDL8 312 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 SYT7O43581 403 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 HLA-DQB2P05538 268 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 SH3BP2P78314 561 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 ZNF74Q16587 644 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 HYAL4Q2M3T9 481 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms