RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 CD5LO43866 347 aa11.13□□□□□ -0.63
COPS7A-211ENST00000540408 PRKD3O94806 890 aa11.13□□□□□ -0.63
COPS7A-211ENST00000540408 NKX2-2O95096 273 aa11.13□□□□□ -0.63
COPS7A-211ENST00000540408 OXSR1O95747 527 aaPredicted RBP11.13□□□□□ -0.63
COPS7A-211ENST00000540408 NGFRP08138 427 aa11.13□□□□□ -0.63
COPS7A-211ENST00000540408 GSTA1P08263 222 aa11.13□□□□□ -0.63
COPS7A-211ENST00000540408 DANCRP0C864 163 aa11.13□□□□□ -0.63
COPS7A-211ENST00000540408 ADH6P28332 368 aa11.13□□□□□ -0.63
COPS7A-211ENST00000540408 LCN1P31025 176 aa11.13□□□□□ -0.63
COPS7A-211ENST00000540408 CDKN1AP38936 164 aa11.13□□□□□ -0.63
COPS7A-211ENST00000540408 EIF1P41567 113 aaKnown RBP11.13□□□□□ -0.63
COPS7A-211ENST00000540408 SERPINB4P48594 390 aa11.13□□□□□ -0.63
COPS7A-211ENST00000540408 PRKAG1P54619 331 aa11.13□□□□□ -0.63
COPS7A-211ENST00000540408 KRTAP1-1Q07627 177 aa11.13□□□□□ -0.63
COPS7A-211ENST00000540408 HSPB3Q12988 150 aa11.13□□□□□ -0.63
COPS7A-211ENST00000540408 PRSS53Q2L4Q9 553 aa11.13□□□□□ -0.63
COPS7A-211ENST00000540408 SFRP5Q5T4F7 317 aa11.13□□□□□ -0.63
COPS7A-211ENST00000540408 UBAP2Q5T6F2 1119 aaKnown RBP11.13□□□□□ -0.63
COPS7A-211ENST00000540408 NOXRED1Q6NXP6 359 aa11.13□□□□□ -0.63
COPS7A-211ENST00000540408 FIGNL1Q6PIW4 674 aa11.13□□□□□ -0.63
COPS7A-211ENST00000540408 TIFABQ6ZNK6 161 aa11.13□□□□□ -0.63
COPS7A-211ENST00000540408 SZRD1Q7Z422 152 aa11.13□□□□□ -0.63
COPS7A-211ENST00000540408 LILRA2Q8N149 483 aa11.13□□□□□ -0.63
COPS7A-211ENST00000540408 CCNYL1Q8N7R7 359 aa11.13□□□□□ -0.63
COPS7A-211ENST00000540408 GATSQ8NAP1 163 aa11.13□□□□□ -0.63
COPS7A-211ENST00000540408 OR4C3Q8NH37 302 aa11.13□□□□□ -0.63
COPS7A-211ENST00000540408 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.13□□□□□ -0.63
COPS7A-211ENST00000540408 NANOS1Q8WY41 292 aaKnown RBP11.13□□□□□ -0.63
COPS7A-211ENST00000540408 IFT81Q8WYA0 676 aa11.13□□□□□ -0.63
COPS7A-211ENST00000540408 ROBO4Q8WZ75 1007 aa11.13□□□□□ -0.63
COPS7A-211ENST00000540408 CCDC126Q96EE4 140 aa11.13□□□□□ -0.63
COPS7A-211ENST00000540408 SH3YL1Q96HL8 342 aaPredicted RBP11.13□□□□□ -0.63
COPS7A-211ENST00000540408 KLHL15Q96M94 604 aa11.13□□□□□ -0.63
COPS7A-211ENST00000540408 HS6ST2Q96MM7 605 aa11.13□□□□□ -0.63
COPS7A-211ENST00000540408 SLCO5A1Q9H2Y9 848 aa11.13□□□□□ -0.63
COPS7A-211ENST00000540408 TMEM185BQ9H7F4 350 aa11.13□□□□□ -0.63
COPS7A-211ENST00000540408 LRTM1Q9HBL6 345 aa11.13□□□□□ -0.63
COPS7A-211ENST00000540408 GP6Q9HCN6 339 aa11.13□□□□□ -0.63
COPS7A-211ENST00000540408 RRAGDQ9NQL2 400 aaPredicted RBP11.13□□□□□ -0.63
COPS7A-211ENST00000540408 UBQLN4Q9NRR5 601 aa11.13□□□□□ -0.63
COPS7A-211ENST00000540408 MED17Q9NVC6 651 aa11.13□□□□□ -0.63
COPS7A-211ENST00000540408 USF3Q68DE3 2245 aa11.13□□□□□ -0.63
COPS7A-211ENST00000540408 PDPK1O15530 556 aa11.12□□□□□ -0.63
COPS7A-211ENST00000540408 SEC22BO75396 215 aa11.12□□□□□ -0.63
COPS7A-211ENST00000540408 RSL1D1O76021 490 aaKnown RBP11.12□□□□□ -0.63
COPS7A-211ENST00000540408 HSPA4LO95757 839 aa11.12□□□□□ -0.63
COPS7A-211ENST00000540408 IGKV1D-16P01601 117 aa11.12□□□□□ -0.63
COPS7A-211ENST00000540408 SOD3P08294 240 aa11.12□□□□□ -0.63
COPS7A-211ENST00000540408 PSMA4P25789 261 aaKnown RBP11.12□□□□□ -0.63
COPS7A-211ENST00000540408 SFTPDP35247 375 aa11.12□□□□□ -0.63
COPS7A-211ENST00000540408 ACVR1BP36896 505 aa11.12□□□□□ -0.63
COPS7A-211ENST00000540408 MANFP55145 182 aaKnown RBP11.12□□□□□ -0.63
COPS7A-211ENST00000540408 FAPQ12884 760 aa11.12□□□□□ -0.63
COPS7A-211ENST00000540408 ITGADQ13349 1161 aa11.12□□□□□ -0.63
COPS7A-211ENST00000540408 P2RY6Q15077 328 aa11.12□□□□□ -0.63
COPS7A-211ENST00000540408 PLPPR5Q32ZL2 321 aa11.12□□□□□ -0.63
COPS7A-211ENST00000540408 CHRFAM7AQ494W8 412 aa11.12□□□□□ -0.63
COPS7A-211ENST00000540408 ZNF672Q499Z4 452 aaPredicted RBP11.12□□□□□ -0.63
COPS7A-211ENST00000540408 DNAJC14Q6Y2X3 702 aaPredicted RBP11.12□□□□□ -0.63
COPS7A-211ENST00000540408 ZNF551Q7Z340 670 aaPredicted RBP11.12□□□□□ -0.63
COPS7A-211ENST00000540408 CNPY4Q8N129 248 aa11.12□□□□□ -0.63
COPS7A-211ENST00000540408 NUP43Q8NFH3 380 aa11.12□□□□□ -0.63
COPS7A-211ENST00000540408 LILRB1Q8NHL6 650 aaPredicted RBP11.12□□□□□ -0.63
COPS7A-211ENST00000540408 B4GALNT2Q8NHY0 566 aa11.12□□□□□ -0.63
COPS7A-211ENST00000540408 KISS1RQ969F8 398 aaPredicted RBP11.12□□□□□ -0.63
COPS7A-211ENST00000540408 ZBED6CLQ96FA7 236 aaPredicted RBP11.12□□□□□ -0.63
COPS7A-211ENST00000540408 METTL2AQ96IZ6 378 aaKnown RBP11.12□□□□□ -0.63
COPS7A-211ENST00000540408 RHNO1Q9BSD3 238 aa11.12□□□□□ -0.63
COPS7A-211ENST00000540408 L2HGDHQ9H9P8 463 aa11.12□□□□□ -0.63
COPS7A-211ENST00000540408 MAGED1Q9Y5V3 778 aaPredicted RBP11.12□□□□□ -0.63
COPS7A-211ENST00000540408 PCNX3Q9H6A9 2034 aa11.11□□□□□ -0.63
COPS7A-211ENST00000540408 ROS1P08922 2347 aa11.11□□□□□ -0.63
COPS7A-211ENST00000540408 A8MV72 311 aaPredicted RBP11.11□□□□□ -0.63
COPS7A-211ENST00000540408 GCM2O75603 506 aaPredicted RBP11.11□□□□□ -0.63
COPS7A-211ENST00000540408 KCNK2O95069 426 aa11.11□□□□□ -0.63
COPS7A-211ENST00000540408 NUDT14O95848 222 aa11.11□□□□□ -0.63
COPS7A-211ENST00000540408 ADAP00813 363 aa11.11□□□□□ -0.63
COPS7A-211ENST00000540408 YES1P07947 543 aa11.11□□□□□ -0.63
COPS7A-211ENST00000540408 ALOX5P09917 674 aa11.11□□□□□ -0.63
COPS7A-211ENST00000540408 ZNF844Q08AG5 666 aa11.11□□□□□ -0.63
COPS7A-211ENST00000540408 TSC22D1Q15714 1073 aa11.11□□□□□ -0.63
COPS7A-211ENST00000540408 TAB1Q15750 504 aa11.11□□□□□ -0.63
COPS7A-211ENST00000540408 ZNF239Q16600 458 aaKnown RBP11.11□□□□□ -0.63
COPS7A-211ENST00000540408 NRF1Q16656 503 aa11.11□□□□□ -0.63
COPS7A-211ENST00000540408 ZCCHC12Q6PEW1 402 aa11.11□□□□□ -0.63
COPS7A-211ENST00000540408 TFAP2EQ6VUC0 442 aa11.11□□□□□ -0.63
COPS7A-211ENST00000540408 FCRLAQ7L513 359 aa11.11□□□□□ -0.63
COPS7A-211ENST00000540408 SSX8Q7RTT4 187 aa11.11□□□□□ -0.63
COPS7A-211ENST00000540408 TRIM46Q7Z4K8 759 aa11.11□□□□□ -0.63
COPS7A-211ENST00000540408 TUSC5Q8IXB3 177 aa11.11□□□□□ -0.63
COPS7A-211ENST00000540408 GABRG1Q8N1C3 465 aa11.11□□□□□ -0.63
COPS7A-211ENST00000540408 ZNF619Q8N2I2 560 aa11.11□□□□□ -0.63
COPS7A-211ENST00000540408 SLC43A2Q8N370 569 aa11.11□□□□□ -0.63
COPS7A-211ENST00000540408 COX18Q8N8Q8 333 aa11.11□□□□□ -0.63
COPS7A-211ENST00000540408 BANPQ8N9N5 519 aa11.11□□□□□ -0.63
COPS7A-211ENST00000540408 ZNF527Q8NB42 609 aa11.11□□□□□ -0.63
COPS7A-211ENST00000540408 PIWIL2Q8TC59 973 aaKnown RBP11.11□□□□□ -0.63
COPS7A-211ENST00000540408 ACMSDQ8TDX5 336 aa11.11□□□□□ -0.63
COPS7A-211ENST00000540408 RNF128Q8TEB7 428 aa11.11□□□□□ -0.63
COPS7A-211ENST00000540408 ABHD3Q8WU67 409 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms