RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 TAF8Q7Z7C8 310 aa12.22□□□□□ -0.45
DNMT1-203ENST00000540357 OR10H5Q8NGA6 315 aa12.22□□□□□ -0.45
DNMT1-203ENST00000540357 OR5T2Q8NGG2 359 aa12.22□□□□□ -0.45
DNMT1-203ENST00000540357 OR4C15Q8NGM1 316 aa12.22□□□□□ -0.45
DNMT1-203ENST00000540357 TTC9Q92623 222 aa12.22□□□□□ -0.45
DNMT1-203ENST00000540357 NSMAFQ92636 917 aa12.22□□□□□ -0.45
DNMT1-203ENST00000540357 UCN3Q969E3 161 aa12.22□□□□□ -0.45
DNMT1-203ENST00000540357 MS4A4EQ96PG1 132 aa12.22□□□□□ -0.45
DNMT1-203ENST00000540357 ARHGAP9Q9BRR9 750 aa12.22□□□□□ -0.45
DNMT1-203ENST00000540357 B3GNT4Q9C0J1 378 aa12.22□□□□□ -0.45
DNMT1-203ENST00000540357 SLC25A19Q9HC21 320 aa12.22□□□□□ -0.45
DNMT1-203ENST00000540357 PLEKHA6Q9Y2H5 1048 aa12.22□□□□□ -0.45
DNMT1-203ENST00000540357 NPFFR2Q9Y5X5 522 aa12.22□□□□□ -0.45
DNMT1-203ENST00000540357 U3KQ87 197 aa12.22□□□□□ -0.45
DNMT1-203ENST00000540357 V9GYH0 126 aa12.22□□□□□ -0.45
DNMT1-203ENST00000540357 SPDEFO95238 335 aa12.21□□□□□ -0.45
DNMT1-203ENST00000540357 RAB40ALP0C0E4 278 aa12.21□□□□□ -0.45
DNMT1-203ENST00000540357 CYBAP13498 195 aa12.21□□□□□ -0.45
DNMT1-203ENST00000540357 UGT2B7P16662 529 aa12.21□□□□□ -0.45
DNMT1-203ENST00000540357 ITPKBP27987 946 aa12.21□□□□□ -0.45
DNMT1-203ENST00000540357 WNT3P56703 355 aa12.21□□□□□ -0.45
DNMT1-203ENST00000540357 MBTPS1Q14703 1052 aa12.21□□□□□ -0.45
DNMT1-203ENST00000540357 WDR53Q7Z5U6 358 aaPredicted RBP12.21□□□□□ -0.45
DNMT1-203ENST00000540357 GOT1L1Q8NHS2 421 aaPredicted RBP12.21□□□□□ -0.45
DNMT1-203ENST00000540357 ABHD4Q8TB40 342 aa12.21□□□□□ -0.45
DNMT1-203ENST00000540357 RAB40AQ8WXH6 277 aa12.21□□□□□ -0.45
DNMT1-203ENST00000540357 GAL3ST1Q99999 423 aa12.21□□□□□ -0.45
DNMT1-203ENST00000540357 TMEM168Q9H0V1 697 aa12.21□□□□□ -0.45
DNMT1-203ENST00000540357 RXFP3Q9NSD7 469 aa12.21□□□□□ -0.45
DNMT1-203ENST00000540357 SH2B3Q9UQQ2 575 aa12.21□□□□□ -0.45
DNMT1-203ENST00000540357 XIRP1Q702N8 1843 aaKnown RBP12.21□□□□□ -0.45
DNMT1-203ENST00000540357 ATP6V1G2-DDX39BF2Z307 99 aa12.21□□□□□ -0.45
DNMT1-203ENST00000540357 GATBO75879 557 aaKnown RBP12.21□□□□□ -0.45
DNMT1-203ENST00000540357 CYB5AP00167 134 aa12.21□□□□□ -0.45
DNMT1-203ENST00000540357 GPR143P51810 404 aa12.21□□□□□ -0.45
DNMT1-203ENST00000540357 BDH1Q02338 343 aa12.21□□□□□ -0.45
DNMT1-203ENST00000540357 CRHR2Q13324 411 aa12.21□□□□□ -0.45
DNMT1-203ENST00000540357 PUM1Q14671 1186 aaKnown RBP eCLIP12.21□□□□□ -0.455e-7■■■□□ 15
DNMT1-203ENST00000540357 PCGF3Q3KNV8 242 aa12.21□□□□□ -0.45
DNMT1-203ENST00000540357 MYEOVQ96EZ4 313 aa12.21□□□□□ -0.45
DNMT1-203ENST00000540357 ATF6BQ99941 703 aa12.21□□□□□ -0.45
DNMT1-203ENST00000540357 CLEC3AO75596 197 aa12.21□□□□□ -0.45
DNMT1-203ENST00000540357 CSN2P05814 226 aa12.21□□□□□ -0.45
DNMT1-203ENST00000540357 IGFBP1P08833 259 aaPredicted RBP12.21□□□□□ -0.45
DNMT1-203ENST00000540357 NPR2P20594 1047 aa12.21□□□□□ -0.45
DNMT1-203ENST00000540357 IRF3Q14653 427 aa12.21□□□□□ -0.45
DNMT1-203ENST00000540357 TMEM205Q6UW68 189 aa12.21□□□□□ -0.45
DNMT1-203ENST00000540357 MBOAT2Q6ZWT7 520 aa12.21□□□□□ -0.45
DNMT1-203ENST00000540357 RASGEF1AQ8N9B8 481 aa12.21□□□□□ -0.45
DNMT1-203ENST00000540357 PLA2G15Q8NCC3 412 aa12.21□□□□□ -0.45
DNMT1-203ENST00000540357 THEM6Q8WUY1 208 aa12.21□□□□□ -0.45
DNMT1-203ENST00000540357 NKD1Q969G9 470 aa12.21□□□□□ -0.45
DNMT1-203ENST00000540357 C20orf85Q9H1P6 137 aa12.21□□□□□ -0.45
DNMT1-203ENST00000540357 TBC1D3KA0A087X1G2 549 aa12.21□□□□□ -0.46
DNMT1-203ENST00000540357 ARPC4-TTLL3A0A0A6YYG9 625 aa12.21□□□□□ -0.46
DNMT1-203ENST00000540357 TBC1D3FA6NER0 549 aaPredicted RBP12.21□□□□□ -0.46
DNMT1-203ENST00000540357 FAM183AA6NL82 134 aa12.21□□□□□ -0.46
DNMT1-203ENST00000540357 PPP1R3DO95685 299 aa12.21□□□□□ -0.46
DNMT1-203ENST00000540357 UBBP0CG47 229 aa12.21□□□□□ -0.46
DNMT1-203ENST00000540357 UBCP0CG48 685 aaKnown RBP12.21□□□□□ -0.46
DNMT1-203ENST00000540357 GZMMP51124 257 aa12.21□□□□□ -0.46
DNMT1-203ENST00000540357 HMGA2P52926 109 aa12.21□□□□□ -0.46
DNMT1-203ENST00000540357 RPS27AP62979 156 aaKnown RBP12.21□□□□□ -0.46
DNMT1-203ENST00000540357 UBA52P62987 128 aaKnown RBP12.21□□□□□ -0.46
DNMT1-203ENST00000540357 HOXC5Q00444 222 aa12.21□□□□□ -0.46
DNMT1-203ENST00000540357 IFITM2Q01629 132 aa12.21□□□□□ -0.46
DNMT1-203ENST00000540357 ZNF362Q5T0B9 420 aaPredicted RBP12.21□□□□□ -0.46
DNMT1-203ENST00000540357 TBC1D3GQ6DHY5 549 aa12.21□□□□□ -0.46
DNMT1-203ENST00000540357 GSG1LQ6UXU4 331 aa12.21□□□□□ -0.46
DNMT1-203ENST00000540357 B3GLCTQ6Y288 498 aa12.21□□□□□ -0.46
DNMT1-203ENST00000540357 OR5AR1Q8NGP9 310 aa12.21□□□□□ -0.46
DNMT1-203ENST00000540357 SYNPRQ8TBG9 265 aa12.21□□□□□ -0.46
DNMT1-203ENST00000540357 CLIP3Q96DZ5 547 aa12.21□□□□□ -0.46
DNMT1-203ENST00000540357 PELOQ9BRX2 385 aaKnown RBP12.21□□□□□ -0.46
DNMT1-203ENST00000540357 CST11Q9H112 138 aa12.21□□□□□ -0.46
DNMT1-203ENST00000540357 ABCG4Q9H172 646 aa12.21□□□□□ -0.46
DNMT1-203ENST00000540357 YARS2Q9Y2Z4 477 aaKnown RBP12.21□□□□□ -0.46
DNMT1-203ENST00000540357 IGHA2P01877 340 aa12.2□□□□□ -0.46
DNMT1-203ENST00000540357 VAMP1P23763 118 aa12.2□□□□□ -0.46
DNMT1-203ENST00000540357 AIMP2Q13155 320 aaKnown RBP12.2□□□□□ -0.46
DNMT1-203ENST00000540357 RAB33AQ14088 237 aa12.2□□□□□ -0.46
DNMT1-203ENST00000540357 APOOLQ6UXV4 268 aa12.2□□□□□ -0.46
DNMT1-203ENST00000540357 MS4A4AQ96JQ5 239 aa12.2□□□□□ -0.46
DNMT1-203ENST00000540357 TMEM184CQ9NVA4 438 aa12.2□□□□□ -0.46
DNMT1-203ENST00000540357 GRHPRQ9UBQ7 328 aa12.2□□□□□ -0.46
DNMT1-203ENST00000540357 FARSAQ9Y285 508 aaKnown RBP12.2□□□□□ -0.46
DNMT1-203ENST00000540357 PTPRFP10586 1907 aa12.2□□□□□ -0.46
DNMT1-203ENST00000540357 KCNE1BA0A087WTH5 132 aa12.2□□□□□ -0.46
DNMT1-203ENST00000540357 DNAJB6O75190 326 aa12.2□□□□□ -0.46
DNMT1-203ENST00000540357 FGF9P31371 208 aaPredicted RBP12.2□□□□□ -0.46
DNMT1-203ENST00000540357 ADH7P40394 386 aa12.2□□□□□ -0.46
DNMT1-203ENST00000540357 FRKP42685 505 aaPredicted RBP12.2□□□□□ -0.46
DNMT1-203ENST00000540357 RAB5BP61020 215 aa12.2□□□□□ -0.46
DNMT1-203ENST00000540357 VRK2Q86Y07 508 aa12.2□□□□□ -0.46
DNMT1-203ENST00000540357 RNF113BQ8IZP6 322 aaKnown RBP12.2□□□□□ -0.46
DNMT1-203ENST00000540357 EID2Q8N6I1 236 aa12.2□□□□□ -0.46
DNMT1-203ENST00000540357 IL17RCQ8NAC3 791 aa12.2□□□□□ -0.46
DNMT1-203ENST00000540357 OR7D2Q96RA2 312 aa12.2□□□□□ -0.46
DNMT1-203ENST00000540357 HS3ST2Q9Y278 367 aa12.2□□□□□ -0.46
DNMT1-203ENST00000540357 TMEM14AQ9Y6G1 99 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms