RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 AP1S3Q96PC3 154 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 INTS14Q96SY0 518 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 TPSD1Q9BZJ3 242 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 HCFC1R1Q9NWW0 138 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 B3GNT3Q9Y2A9 372 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 GPR52Q9Y2T5 361 aa6.11□□□□□ -1.43
LSAMP-207ENST00000539563 M0R3H8 397 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 GABBR2O75899 941 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 DCTP40126 519 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 RAB40BQ12829 278 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 TLDC1Q6P9B6 456 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 CCBE1Q6UXH8 406 aaPredicted RBP6.1□□□□□ -1.43
LSAMP-207ENST00000539563 DTWD1Q8N5C7 304 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 CSNK2A3Q8NEV1 391 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 RNF128Q8TEB7 428 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 ASB12Q8WXK4 309 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 CPNE5Q9HCH3 593 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 EMC3Q9P0I2 261 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 STRCQ7RTU9 1775 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 ANTXRLA6NF34 631 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 ANKRD30BLA7E2S9 258 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 C12orf71A8MTZ7 269 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 SRPX2O60687 465 aaPredicted RBP6.1□□□□□ -1.43
LSAMP-207ENST00000539563 SDC3O75056 442 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 PLATP00750 562 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 CDK1P06493 297 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 CD79AP11912 226 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 FOSL2P15408 326 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 POU3F4P49335 361 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 PCBD1P61457 104 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 SF3A2Q15428 464 aaKnown RBP6.1□□□□□ -1.43
LSAMP-207ENST00000539563 TMEM244Q5VVB8 128 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 WBP2NLQ6ICG8 309 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 MFSD6LQ8IWD5 586 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 ZNF595Q8IYB9 648 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 OR52R1Q8NGF1 315 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 TBC1D15Q8TC07 691 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 ASB17Q8WXJ9 295 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 ENKD1Q9H0I2 346 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 UBQLN4Q9NRR5 601 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 ACSS1Q9NUB1 689 aaPredicted RBP6.1□□□□□ -1.43
LSAMP-207ENST00000539563 PLEKHJ1Q9NW61 149 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 EBF1Q9UH73 591 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 ADAM29Q9UKF5 820 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 MEIS3P2A8K0S8 358 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 SC5DO75845 299 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 PAHP00439 452 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 AMY2AP04746 511 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 CCR7P32248 378 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 CXCL12P48061 93 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 CSNK1A1P48729 337 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 PTH2RP49190 550 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 CAMK2DQ13557 499 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 MEF2DQ14814 521 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 NFATC4Q14934 902 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 SLC6A19Q695T7 634 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 SLC16A9Q7RTY1 509 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 MISPQ8IVT2 679 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 ZNF695Q8IW36 515 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 TP53INP2Q8IXH6 220 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 RNF113BQ8IZP6 322 aaKnown RBP6.1□□□□□ -1.43
LSAMP-207ENST00000539563 ZFP41Q8N8Y5 198 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 WDSUB1Q8N9V3 476 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 OR5K2Q8NHB8 316 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 ARL5BQ96KC2 179 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 CACNG6Q9BXT2 260 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 ARL6Q9H0F7 186 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 MAN2C1Q9NTJ4 1040 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 GPR160Q9UJ42 338 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 NENFQ9UMX5 172 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 ERVK-19Q9WJR5 959 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 HHLA1C9JL84 531 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 PRAF2O60831 178 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 UPK1BO75841 260 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 UGT2B7P16662 529 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 PGGT1BP53609 377 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 NIPAL3Q6P499 406 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 TRIM73Q86UV7 250 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 ACOT11Q8WXI4 607 aaPredicted RBP6.1□□□□□ -1.43
LSAMP-207ENST00000539563 TBC1D20Q96BZ9 403 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 SLC25A44Q96H78 314 aaPredicted RBP6.1□□□□□ -1.43
LSAMP-207ENST00000539563 TXNDC15Q96J42 360 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 C7orf50Q9BRJ6 194 aaKnown RBP6.1□□□□□ -1.43
LSAMP-207ENST00000539563 SLA2Q9H6Q3 261 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 PTRH2Q9Y3E5 179 aaKnown RBP6.1□□□□□ -1.43
LSAMP-207ENST00000539563 GABRR3A8MPY1 467 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 ATP6V1G1O75348 118 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 SFTPDP35247 375 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 TGFBR3Q03167 851 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 DEFB110Q30KQ9 67 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 KCTD20Q7Z5Y7 419 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 PDZD9Q8IXQ8 264 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 BOLLQ8N9W6 283 aaKnown RBP6.1□□□□□ -1.43
LSAMP-207ENST00000539563 C22orf15Q8WYQ4 148 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 SFXN2Q96NB2 322 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 LMF1Q96S06 567 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 TSNAXQ99598 290 aaKnown RBP6.1□□□□□ -1.43
LSAMP-207ENST00000539563 PLEKHA3Q9HB20 300 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 INIPQ9NRY2 104 aa6.1□□□□□ -1.43
LSAMP-207ENST00000539563 C14orf119Q9NWQ9 140 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms