RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 AMBRA1Q9C0C7 1298 aa8.22□□□□□ -1.09
DDB1-213ENST00000539332 ANKRA2Q9H9E1 313 aa8.22□□□□□ -1.09
DDB1-213ENST00000539332 DUSP22Q9NRW4 184 aa8.22□□□□□ -1.09
DDB1-213ENST00000539332 LANCL2Q9NS86 450 aa8.22□□□□□ -1.09
DDB1-213ENST00000539332 HCN3Q9P1Z3 774 aa8.22□□□□□ -1.09
DDB1-213ENST00000539332 DHCR7Q9UBM7 475 aaKnown RBP8.22□□□□□ -1.09
DDB1-213ENST00000539332 TRPC4Q9UBN4 977 aa8.22□□□□□ -1.09
DDB1-213ENST00000539332 TMEFF2Q9UIK5 374 aaPredicted RBP8.22□□□□□ -1.09
DDB1-213ENST00000539332 RARRES3Q9UL19 164 aa8.22□□□□□ -1.09
DDB1-213ENST00000539332 RABL2BQ9UNT1 228 aa8.22□□□□□ -1.09
DDB1-213ENST00000539332 RBMX2Q9Y388 322 aaKnown RBP8.22□□□□□ -1.09
DDB1-213ENST00000539332 MAGED1Q9Y5V3 778 aaPredicted RBP8.22□□□□□ -1.09
DDB1-213ENST00000539332 PEX16Q9Y5Y5 336 aa8.22□□□□□ -1.09
DDB1-213ENST00000539332 LYVE1Q9Y5Y7 322 aa8.22□□□□□ -1.09
DDB1-213ENST00000539332 ENPP4Q9Y6X5 453 aa8.22□□□□□ -1.09
DDB1-213ENST00000539332 PTPRBP23467 1997 aa8.21□□□□□ -1.09
DDB1-213ENST00000539332 EFCAB7A8K855 629 aa8.21□□□□□ -1.1
DDB1-213ENST00000539332 NOTOA8MTQ0 251 aa8.21□□□□□ -1.1
DDB1-213ENST00000539332 A8MVJ9 347 aa8.21□□□□□ -1.1
DDB1-213ENST00000539332 E9PQ18 207 aa8.21□□□□□ -1.1
DDB1-213ENST00000539332 ADAMDEC1O15204 470 aa8.21□□□□□ -1.1
DDB1-213ENST00000539332 CCNKO75909 580 aa8.21□□□□□ -1.1
DDB1-213ENST00000539332 SOX30O94993 753 aa8.21□□□□□ -1.1
DDB1-213ENST00000539332 ZIC2O95409 532 aaPredicted RBP8.21□□□□□ -1.1
DDB1-213ENST00000539332 TIAF1O95411 115 aa8.21□□□□□ -1.1
DDB1-213ENST00000539332 CBX7O95931 251 aa8.21□□□□□ -1.1
DDB1-213ENST00000539332 GUSBP08236 651 aa8.21□□□□□ -1.1
DDB1-213ENST00000539332 CT62P0C5K7 136 aa8.21□□□□□ -1.1
DDB1-213ENST00000539332 NR2F1P10589 423 aa8.21□□□□□ -1.1
DDB1-213ENST00000539332 ACP2P11117 423 aa8.21□□□□□ -1.1
DDB1-213ENST00000539332 ITGA2P17301 1181 aa8.21□□□□□ -1.1
DDB1-213ENST00000539332 ALAS2P22557 587 aa8.21□□□□□ -1.1
DDB1-213ENST00000539332 ARHGDIAP52565 204 aa8.21□□□□□ -1.1
DDB1-213ENST00000539332 HMGA2P52926 109 aa8.21□□□□□ -1.1
DDB1-213ENST00000539332 CLDN6P56747 220 aa8.21□□□□□ -1.1
DDB1-213ENST00000539332 HSD17B7P56937 341 aa8.21□□□□□ -1.1
DDB1-213ENST00000539332 SLC35A2P78381 396 aa8.21□□□□□ -1.1
DDB1-213ENST00000539332 FOXK1P85037 733 aa8.21□□□□□ -1.1
DDB1-213ENST00000539332 ID2Q02363 134 aa8.21□□□□□ -1.1
DDB1-213ENST00000539332 BIKQ13323 160 aa8.21□□□□□ -1.1
DDB1-213ENST00000539332 IL11RAQ14626 422 aa8.21□□□□□ -1.1
DDB1-213ENST00000539332 NPTX1Q15818 432 aa8.21□□□□□ -1.1
DDB1-213ENST00000539332 ISXQ2M1V0 245 aa8.21□□□□□ -1.1
DDB1-213ENST00000539332 ARHGAP11BQ3KRB8 267 aa8.21□□□□□ -1.1
DDB1-213ENST00000539332 TRMT12Q53H54 448 aaKnown RBP8.21□□□□□ -1.1
DDB1-213ENST00000539332 PWWP2BQ6NUJ5 590 aa8.21□□□□□ -1.1
DDB1-213ENST00000539332 FAHD1Q6P587 224 aa8.21□□□□□ -1.1
DDB1-213ENST00000539332 DHRS13Q6UX07 377 aa8.21□□□□□ -1.1
DDB1-213ENST00000539332 BPHLQ86WA6 291 aaPredicted RBP8.21□□□□□ -1.1
DDB1-213ENST00000539332 PPP1R3BQ86XI6 285 aa8.21□□□□□ -1.1
DDB1-213ENST00000539332 KRT73Q86Y46 540 aa8.21□□□□□ -1.1
DDB1-213ENST00000539332 CCDC103Q8IW40 242 aa8.21□□□□□ -1.1
DDB1-213ENST00000539332 METTL27Q8N6F8 245 aaPredicted RBP8.21□□□□□ -1.1
DDB1-213ENST00000539332 ASCC1Q8N9N2 400 aaKnown RBP8.21□□□□□ -1.1
DDB1-213ENST00000539332 CDRT4Q8N9R6 151 aa8.21□□□□□ -1.1
DDB1-213ENST00000539332 OR51Q1Q8NH59 317 aa8.21□□□□□ -1.1
DDB1-213ENST00000539332 ANGPTL6Q8NI99 470 aa8.21□□□□□ -1.1
DDB1-213ENST00000539332 SLC38A4Q969I6 547 aa8.21□□□□□ -1.1
DDB1-213ENST00000539332 MMABQ96EY8 250 aaPredicted RBP8.21□□□□□ -1.1
DDB1-213ENST00000539332 PEX11GQ96HA9 241 aa8.21□□□□□ -1.1
DDB1-213ENST00000539332 MED30Q96HR3 178 aa8.21□□□□□ -1.1
DDB1-213ENST00000539332 ZNF354BQ96LW1 612 aa8.21□□□□□ -1.1
DDB1-213ENST00000539332 COL21A1Q96P44 957 aa8.21□□□□□ -1.1
DDB1-213ENST00000539332 STACQ99469 402 aa8.21□□□□□ -1.1
DDB1-213ENST00000539332 CCDC32Q9BV29 185 aa8.21□□□□□ -1.1
DDB1-213ENST00000539332 PIGUQ9H490 435 aa8.21□□□□□ -1.1
DDB1-213ENST00000539332 MARCH7Q9H992 704 aa8.21□□□□□ -1.1
DDB1-213ENST00000539332 APMAPQ9HDC9 416 aa8.21□□□□□ -1.1
DDB1-213ENST00000539332 ABCB10Q9NRK6 738 aa8.21□□□□□ -1.1
DDB1-213ENST00000539332 SRPK3Q9UPE1 567 aa8.21□□□□□ -1.1
DDB1-213ENST00000539332 MMACHCQ9Y4U1 282 aa8.21□□□□□ -1.1
DDB1-213ENST00000539332 PCDHGB3Q9Y5G1 929 aa8.21□□□□□ -1.1
DDB1-213ENST00000539332 PCDHGA10Q9Y5H3 936 aa8.21□□□□□ -1.1
DDB1-213ENST00000539332 KCNE3Q9Y6H6 103 aa8.21□□□□□ -1.1
DDB1-213ENST00000539332 PMF1-BGLAPU3KQ54 211 aa8.21□□□□□ -1.1
DDB1-213ENST00000539332 DCHS1Q96JQ0 3298 aa8.21□□□□□ -1.1
DDB1-213ENST00000539332 SPAARA0A1B0GVQ0 90 aa8.2□□□□□ -1.1
DDB1-213ENST00000539332 A0A1B0GX78 115 aa8.2□□□□□ -1.1
DDB1-213ENST00000539332 ARRDC5A6NEK1 342 aa8.2□□□□□ -1.1
DDB1-213ENST00000539332 METTL15A6NJ78 407 aa8.2□□□□□ -1.1
DDB1-213ENST00000539332 EFCAB9A8MZ26 197 aa8.2□□□□□ -1.1
DDB1-213ENST00000539332 PTGES3LE9PB15 166 aa8.2□□□□□ -1.1
DDB1-213ENST00000539332 SYT5O00445 386 aa8.2□□□□□ -1.1
DDB1-213ENST00000539332 TM4SF5O14894 197 aa8.2□□□□□ -1.1
DDB1-213ENST00000539332 DSCR3O14972 297 aa8.2□□□□□ -1.1
DDB1-213ENST00000539332 NDUFB5O43674 189 aa8.2□□□□□ -1.1
DDB1-213ENST00000539332 HS6ST1O60243 411 aa8.2□□□□□ -1.1
DDB1-213ENST00000539332 CSO75390 466 aaKnown RBP8.2□□□□□ -1.1
DDB1-213ENST00000539332 SCRG1O75711 98 aa8.2□□□□□ -1.1
DDB1-213ENST00000539332 DKK1O94907 266 aa8.2□□□□□ -1.1
DDB1-213ENST00000539332 DIRAS1O95057 198 aa8.2□□□□□ -1.1
DDB1-213ENST00000539332 EPPINO95925 133 aa8.2□□□□□ -1.1
DDB1-213ENST00000539332 FGF5P12034 268 aa8.2□□□□□ -1.1
DDB1-213ENST00000539332 CCL4P13236 92 aa8.2□□□□□ -1.1
DDB1-213ENST00000539332 CD46P15529 392 aa8.2□□□□□ -1.1
DDB1-213ENST00000539332 RHCEP18577 417 aa8.2□□□□□ -1.1
DDB1-213ENST00000539332 TNFRSF1BP20333 461 aa8.2□□□□□ -1.1
DDB1-213ENST00000539332 RPS4Y1P22090 263 aaKnown RBP8.2□□□□□ -1.1
DDB1-213ENST00000539332 PSMB9P28065 219 aa8.2□□□□□ -1.1
DDB1-213ENST00000539332 ETV6P41212 452 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms