RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 SLC18A2Q05940 514 aa11.2□□□□□ -0.62
VAMP1-206ENST00000538970 PRSS57Q6UWY2 283 aa11.2□□□□□ -0.62
VAMP1-206ENST00000538970 STAC2Q6ZMT1 411 aa11.2□□□□□ -0.62
VAMP1-206ENST00000538970 YTHDF3Q7Z739 585 aaKnown RBP11.2□□□□□ -0.62
VAMP1-206ENST00000538970 C10orf107Q8IVU9 208 aa11.2□□□□□ -0.62
VAMP1-206ENST00000538970 C4orf33Q8N1A6 199 aa11.2□□□□□ -0.62
VAMP1-206ENST00000538970 CIARTQ8N365 385 aaPredicted RBP11.2□□□□□ -0.62
VAMP1-206ENST00000538970 OR6Y1Q8NGX8 325 aa11.2□□□□□ -0.62
VAMP1-206ENST00000538970 ACTRT2Q8TDY3 377 aa11.2□□□□□ -0.62
VAMP1-206ENST00000538970 EPS8L3Q8TE67 593 aaKnown RBP11.2□□□□□ -0.62
VAMP1-206ENST00000538970 OTUB1Q96FW1 271 aaPredicted RBP11.2□□□□□ -0.62
VAMP1-206ENST00000538970 PERPQ96FX8 193 aa11.2□□□□□ -0.62
VAMP1-206ENST00000538970 Q96MF0 132 aa11.2□□□□□ -0.62
VAMP1-206ENST00000538970 RNF145Q96MT1 663 aa11.2□□□□□ -0.62
VAMP1-206ENST00000538970 KLHDC3Q9BQ90 382 aa11.2□□□□□ -0.62
VAMP1-206ENST00000538970 TRMOQ9BU70 441 aa11.2□□□□□ -0.62
VAMP1-206ENST00000538970 GATA5Q9BWX5 397 aaPredicted RBP11.2□□□□□ -0.62
VAMP1-206ENST00000538970 PPCSQ9HAB8 311 aa11.2□□□□□ -0.62
VAMP1-206ENST00000538970 MED17Q9NVC6 651 aa11.2□□□□□ -0.62
VAMP1-206ENST00000538970 FBXO34Q9NWN3 711 aa11.2□□□□□ -0.62
VAMP1-206ENST00000538970 SH3BP4Q9P0V3 963 aa11.2□□□□□ -0.62
VAMP1-206ENST00000538970 BAIAP2L1Q9UHR4 511 aa11.2□□□□□ -0.62
VAMP1-206ENST00000538970 MID2Q9UJV3 735 aa11.2□□□□□ -0.62
VAMP1-206ENST00000538970 TMED5Q9Y3A6 229 aa11.2□□□□□ -0.62
VAMP1-206ENST00000538970 DNAJC15Q9Y5T4 150 aa11.2□□□□□ -0.62
VAMP1-206ENST00000538970 CSPG4Q6UVK1 2322 aa11.19□□□□□ -0.62
VAMP1-206ENST00000538970 UQCRHLA0A096LP55 91 aa11.19□□□□□ -0.62
VAMP1-206ENST00000538970 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.19□□□□□ -0.62
VAMP1-206ENST00000538970 A0A1W2PQD3 144 aa11.19□□□□□ -0.62
VAMP1-206ENST00000538970 SMIM23A6NLE4 172 aa11.19□□□□□ -0.62
VAMP1-206ENST00000538970 H7C1Q1 480 aa11.19□□□□□ -0.62
VAMP1-206ENST00000538970 TNFSF11O14788 317 aa11.19□□□□□ -0.62
VAMP1-206ENST00000538970 KLF4O43474 513 aa11.19□□□□□ -0.62
VAMP1-206ENST00000538970 CXCL13O43927 109 aa11.19□□□□□ -0.62
VAMP1-206ENST00000538970 CHEK2O96017 543 aa11.19□□□□□ -0.62
VAMP1-206ENST00000538970 OPN1LWP04000 364 aa11.19□□□□□ -0.62
VAMP1-206ENST00000538970 ALOX5P09917 674 aa11.19□□□□□ -0.62
VAMP1-206ENST00000538970 LINC00032P0C843 101 aa11.19□□□□□ -0.62
VAMP1-206ENST00000538970 PCSK6P29122 969 aa11.19□□□□□ -0.62
VAMP1-206ENST00000538970 CD226Q15762 336 aa11.19□□□□□ -0.62
VAMP1-206ENST00000538970 BEX5Q5H9J7 111 aa11.19□□□□□ -0.62
VAMP1-206ENST00000538970 CCNJQ5T5M9 372 aa11.19□□□□□ -0.62
VAMP1-206ENST00000538970 CPTPQ5TA50 214 aa11.19□□□□□ -0.62
VAMP1-206ENST00000538970 ZCCHC12Q6PEW1 402 aa11.19□□□□□ -0.62
VAMP1-206ENST00000538970 ESPNLQ6ZVH7 1005 aa11.19□□□□□ -0.62
VAMP1-206ENST00000538970 MISPQ8IVT2 679 aa11.19□□□□□ -0.62
VAMP1-206ENST00000538970 COX18Q8N8Q8 333 aa11.19□□□□□ -0.62
VAMP1-206ENST00000538970 EIF1ADQ8N9N8 165 aaKnown RBP11.19□□□□□ -0.62
VAMP1-206ENST00000538970 OR2V1Q8NHB1 315 aa11.19□□□□□ -0.62
VAMP1-206ENST00000538970 POC1BQ8TC44 478 aa11.19□□□□□ -0.62
VAMP1-206ENST00000538970 UBLCP1Q8WVY7 318 aaPredicted RBP11.19□□□□□ -0.62
VAMP1-206ENST00000538970 IGFBPL1Q8WX77 278 aa11.19□□□□□ -0.62
VAMP1-206ENST00000538970 MTERF3Q96E29 417 aa11.19□□□□□ -0.62
VAMP1-206ENST00000538970 FAM120BQ96EK7 910 aaKnown RBP11.19□□□□□ -0.62
VAMP1-206ENST00000538970 C16orf58Q96GQ5 468 aa11.19□□□□□ -0.62
VAMP1-206ENST00000538970 SH3YL1Q96HL8 342 aaPredicted RBP11.19□□□□□ -0.62
VAMP1-206ENST00000538970 GSX2Q9BZM3 304 aa11.19□□□□□ -0.62
VAMP1-206ENST00000538970 TMEM185BQ9H7F4 350 aa11.19□□□□□ -0.62
VAMP1-206ENST00000538970 UBQLN4Q9NRR5 601 aa11.19□□□□□ -0.62
VAMP1-206ENST00000538970 GLRX2Q9NS18 164 aa11.19□□□□□ -0.62
VAMP1-206ENST00000538970 SIRT3Q9NTG7 399 aaPredicted RBP11.19□□□□□ -0.62
VAMP1-206ENST00000538970 ZCCHC3Q9NUD5 404 aaKnown RBP11.19□□□□□ -0.62
VAMP1-206ENST00000538970 COL6A5A8TX70 2615 aa11.19□□□□□ -0.62
VAMP1-206ENST00000538970 A0A0J9YW62 118 aa11.18□□□□□ -0.62
VAMP1-206ENST00000538970 TMEM233B4DJY2 109 aa11.18□□□□□ -0.62
VAMP1-206ENST00000538970 SCDO00767 359 aa11.18□□□□□ -0.62
VAMP1-206ENST00000538970 TRIM13O60858 407 aa11.18□□□□□ -0.62
VAMP1-206ENST00000538970 SYNGR4O95473 234 aa11.18□□□□□ -0.62
VAMP1-206ENST00000538970 HSPA4LO95757 839 aa11.18□□□□□ -0.62
VAMP1-206ENST00000538970 LY6G6DO95868 133 aa11.18□□□□□ -0.62
VAMP1-206ENST00000538970 C8BP07358 591 aa11.18□□□□□ -0.62
VAMP1-206ENST00000538970 CHRNGP07510 517 aa11.18□□□□□ -0.62
VAMP1-206ENST00000538970 LINGO3P0C6S8 592 aa11.18□□□□□ -0.62
VAMP1-206ENST00000538970 BCKDHAP12694 445 aa11.18□□□□□ -0.62
VAMP1-206ENST00000538970 HPGDP15428 266 aa11.18□□□□□ -0.62
VAMP1-206ENST00000538970 EFNA1P20827 205 aaPredicted RBP11.18□□□□□ -0.62
VAMP1-206ENST00000538970 AGTR1P30556 359 aa11.18□□□□□ -0.62
VAMP1-206ENST00000538970 ASMTP46597 345 aa11.18□□□□□ -0.62
VAMP1-206ENST00000538970 SERPINB4P48594 390 aa11.18□□□□□ -0.62
VAMP1-206ENST00000538970 PTH2RP49190 550 aa11.18□□□□□ -0.62
VAMP1-206ENST00000538970 PRIM2P49643 509 aa11.18□□□□□ -0.62
VAMP1-206ENST00000538970 POU6F2P78424 691 aaPredicted RBP11.18□□□□□ -0.62
VAMP1-206ENST00000538970 MLC1Q15049 377 aa11.18□□□□□ -0.62
VAMP1-206ENST00000538970 GALNTL6Q49A17 601 aa11.18□□□□□ -0.62
VAMP1-206ENST00000538970 HBMQ6B0K9 141 aa11.18□□□□□ -0.62
VAMP1-206ENST00000538970 ZNF704Q6ZNC4 412 aaPredicted RBP11.18□□□□□ -0.62
VAMP1-206ENST00000538970 BEND4Q6ZU67 534 aa11.18□□□□□ -0.62
VAMP1-206ENST00000538970 TRABD2AQ86V40 505 aa11.18□□□□□ -0.62
VAMP1-206ENST00000538970 B4GALNT2Q8NHY0 566 aa11.18□□□□□ -0.62
VAMP1-206ENST00000538970 TWIST2Q8WVJ9 160 aa11.18□□□□□ -0.62
VAMP1-206ENST00000538970 JADE3Q92613 823 aa11.18□□□□□ -0.62
VAMP1-206ENST00000538970 KLHL15Q96M94 604 aa11.18□□□□□ -0.62
VAMP1-206ENST00000538970 BDH2Q9BUT1 245 aa11.18□□□□□ -0.62
VAMP1-206ENST00000538970 DUSP22Q9NRW4 184 aa11.18□□□□□ -0.62
VAMP1-206ENST00000538970 MKS1Q9NXB0 559 aa11.18□□□□□ -0.62
VAMP1-206ENST00000538970 ATP6V1HQ9UI12 483 aa11.18□□□□□ -0.62
VAMP1-206ENST00000538970 ADAM21Q9UKJ8 722 aa11.18□□□□□ -0.62
VAMP1-206ENST00000538970 RTTNQ86VV8 2226 aa11.18□□□□□ -0.62
VAMP1-206ENST00000538970 STAB1Q9NY15 2570 aa11.18□□□□□ -0.62
VAMP1-206ENST00000538970 TRIM64A6NGJ6 449 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms