RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 ZNF783Q6ZMS7 281 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 ST7LQ8TDW4 575 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 ZNF296Q8WUU4 475 aaPredicted RBP5.09□□□□□ -1.59
PTPRD-213ENST00000537002 KHSRPQ92945 711 aaKnown RBP eCLIP5.09□□□□□ -1.59
PTPRD-213ENST00000537002 APIPQ96GX9 242 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 POLDIP3Q9BY77 421 aaKnown RBP5.09□□□□□ -1.59
PTPRD-213ENST00000537002 OR51M1Q9H341 326 aa5.09□□□□□ -1.59
PTPRD-213ENST00000537002 STRCP1A6NGW2 1772 aa5.09□□□□□ -1.6
PTPRD-213ENST00000537002 CRTAPO75718 401 aaPredicted RBP5.09□□□□□ -1.6
PTPRD-213ENST00000537002 MAS1P04201 325 aa5.09□□□□□ -1.6
PTPRD-213ENST00000537002 FABP1P07148 127 aa5.09□□□□□ -1.6
PTPRD-213ENST00000537002 SLC35G4P0C7Q5 338 aa5.09□□□□□ -1.6
PTPRD-213ENST00000537002 ELFN1P0C7U0 828 aa5.09□□□□□ -1.6
PTPRD-213ENST00000537002 TYRP1P17643 537 aa5.09□□□□□ -1.6
PTPRD-213ENST00000537002 HOXA9P31269 272 aa5.09□□□□□ -1.6
PTPRD-213ENST00000537002 STXBP1P61764 594 aaKnown RBP5.09□□□□□ -1.6
PTPRD-213ENST00000537002 AP1S1P61966 158 aa5.09□□□□□ -1.6
PTPRD-213ENST00000537002 ACSM1Q08AH1 577 aa5.09□□□□□ -1.6
PTPRD-213ENST00000537002 AADACL4Q5VUY2 407 aa5.09□□□□□ -1.6
PTPRD-213ENST00000537002 BCDIN3DQ7Z5W3 292 aaKnown RBP5.09□□□□□ -1.6
PTPRD-213ENST00000537002 GID4Q8IVV7 300 aa5.09□□□□□ -1.6
PTPRD-213ENST00000537002 SERPINA12Q8IW75 414 aa5.09□□□□□ -1.6
PTPRD-213ENST00000537002 SLC44A3Q8N4M1 653 aa5.09□□□□□ -1.6
PTPRD-213ENST00000537002 GPR26Q8NDV2 337 aa5.09□□□□□ -1.6
PTPRD-213ENST00000537002 OR1J4Q8NGS1 313 aa5.09□□□□□ -1.6
PTPRD-213ENST00000537002 OR4Q3Q8NH05 313 aa5.09□□□□□ -1.6
PTPRD-213ENST00000537002 CXorf40AQ8TE69 158 aa5.09□□□□□ -1.6
PTPRD-213ENST00000537002 DCUN1D4Q92564 292 aa5.09□□□□□ -1.6
PTPRD-213ENST00000537002 CDC6Q99741 560 aa5.09□□□□□ -1.6
PTPRD-213ENST00000537002 NPAS1Q99742 590 aa5.09□□□□□ -1.6
PTPRD-213ENST00000537002 SLC25A18Q9H1K4 315 aa5.09□□□□□ -1.6
PTPRD-213ENST00000537002 SLC38A1Q9H2H9 487 aa5.09□□□□□ -1.6
PTPRD-213ENST00000537002 CHRDQ9H2X0 955 aa5.09□□□□□ -1.6
PTPRD-213ENST00000537002 TSTD3H0UI37 97 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 DNAJB6O75190 326 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 SLC25A12O75746 678 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 IL5P05113 134 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 OR12D1P0DN82 309 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 GNSP15586 552 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 UQCRC2P22695 453 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 GPR4P46093 362 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 HOXC5Q00444 222 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 EIPR1Q53HC9 387 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 OR10H5Q8NGA6 315 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 OR4M1Q8NGD0 313 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 WDR20Q8TBZ3 569 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 APH1BQ8WW43 257 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 REEP4Q9H6H4 257 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 FBXL2Q9UKC9 423 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 ZAR1LA6NP61 321 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 MAFKO60675 156 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 RCBTB2O95199 551 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 HTR3BO95264 441 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 CLDN7O95471 211 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 IFNA21P01568 189 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 URODP06132 367 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 HEXAP06865 529 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 LIPCP11150 499 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 GABRB1P18505 474 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 NT5EP21589 574 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 CD52P31358 61 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 CAMLGP49069 296 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 PRR5P85299 388 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 PRKCZQ05513 592 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 CRHR2Q13324 411 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 IRF5Q13568 498 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 TRAM2Q15035 370 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 MICBQ29980 383 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 FNDC3BQ53EP0 1204 aaKnown RBP5.08□□□□□ -1.6
PTPRD-213ENST00000537002 PLBD1Q6P4A8 553 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 NUDT13Q86X67 352 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 FAM26EQ8N5C1 309 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 PXT1Q8NFP0 134 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 OR4K5Q8NGD3 323 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 RNF39Q9H2S5 420 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 HHATLQ9HCP6 504 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 MRPS30Q9NP92 439 aaKnown RBP5.08□□□□□ -1.6
PTPRD-213ENST00000537002 TAS2R8Q9NYW2 309 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 GPR171O14626 319 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 SEMG1P04279 462 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 AMY2AP04746 511 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 PFKMP08237 780 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 TACSTD2P09758 323 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 RPS2P15880 293 aaKnown RBP5.08□□□□□ -1.6
PTPRD-213ENST00000537002 LSSP48449 732 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 PRKXP51817 358 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 TLE2Q04725 743 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 PON3Q15166 354 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 PLA1AQ53H76 456 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 PRAMEF19Q5SWL8 479 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 FRMPD2BQ6IN97 320 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 FAM180BQ6P0A1 224 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 TMEM220Q6QAJ8 160 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 GPR142Q7Z601 462 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 C7orf61Q8IZ16 206 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 CELF5Q8N6W0 485 aaKnown RBP5.08□□□□□ -1.6
PTPRD-213ENST00000537002 ZNF527Q8NB42 609 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 OR52H1Q8NGJ2 320 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 AUTS2Q8WXX7 1259 aa5.08□□□□□ -1.6
PTPRD-213ENST00000537002 LCORQ96JN0 433 aaPredicted RBP5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms