RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 HRO43593 1189 aa12.59□□□□□ -0.39
SMG6-203ENST00000536871 CHP2O43745 196 aa12.59□□□□□ -0.39
SMG6-203ENST00000536871 FOXD2O60548 495 aaPredicted RBP12.59□□□□□ -0.39
SMG6-203ENST00000536871 CSO75390 466 aaKnown RBP12.59□□□□□ -0.39
SMG6-203ENST00000536871 GPR3P46089 330 aa12.59□□□□□ -0.39
SMG6-203ENST00000536871 PPP5CP53041 499 aa12.59□□□□□ -0.39
SMG6-203ENST00000536871 MLLT10P55197 1068 aa12.59□□□□□ -0.39
SMG6-203ENST00000536871 CTBP2P56545 445 aa12.59□□□□□ -0.39
SMG6-203ENST00000536871 WNT4P56705 351 aa12.59□□□□□ -0.39
SMG6-203ENST00000536871 PSG6Q00889 435 aa12.59□□□□□ -0.39
SMG6-203ENST00000536871 ZNF45Q02386 682 aa12.59□□□□□ -0.39
SMG6-203ENST00000536871 FUT7Q11130 342 aa12.59□□□□□ -0.39
SMG6-203ENST00000536871 DSG2Q14126 1118 aa12.59□□□□□ -0.39
SMG6-203ENST00000536871 EXOSC7Q15024 291 aaKnown RBP12.59□□□□□ -0.39
SMG6-203ENST00000536871 AMZ1Q400G9 498 aa12.59□□□□□ -0.39
SMG6-203ENST00000536871 CCNJQ5T5M9 372 aa12.59□□□□□ -0.39
SMG6-203ENST00000536871 YOD1Q5VVQ6 348 aaPredicted RBP12.59□□□□□ -0.39
SMG6-203ENST00000536871 ATCAYQ86WG3 371 aa12.59□□□□□ -0.39
SMG6-203ENST00000536871 FRMD1Q8N878 549 aa12.59□□□□□ -0.39
SMG6-203ENST00000536871 LSMEM1Q8N8F7 131 aa12.59□□□□□ -0.39
SMG6-203ENST00000536871 TMEM255BQ8WV15 326 aa12.59□□□□□ -0.39
SMG6-203ENST00000536871 DNASE2BQ8WZ79 361 aa12.59□□□□□ -0.39
SMG6-203ENST00000536871 RNFT2Q96EX2 444 aa12.59□□□□□ -0.39
SMG6-203ENST00000536871 VSTM2LQ96N03 204 aa12.59□□□□□ -0.39
SMG6-203ENST00000536871 OR1F2PQ96R84 312 aa12.59□□□□□ -0.39
SMG6-203ENST00000536871 OR5M11Q96RB7 305 aa12.59□□□□□ -0.39
SMG6-203ENST00000536871 COQ7Q99807 217 aa12.59□□□□□ -0.39
SMG6-203ENST00000536871 PLA2G12AQ9BZM1 189 aa12.59□□□□□ -0.39
SMG6-203ENST00000536871 HOXD1Q9GZZ0 328 aa12.59□□□□□ -0.39
SMG6-203ENST00000536871 ZBTB20Q9HC78 741 aaPredicted RBP12.59□□□□□ -0.39
SMG6-203ENST00000536871 NDUFB11Q9NX14 153 aa12.59□□□□□ -0.39
SMG6-203ENST00000536871 CNIH4Q9P003 139 aa12.59□□□□□ -0.39
SMG6-203ENST00000536871 CRNNQ9UBG3 495 aaPredicted RBP12.59□□□□□ -0.39
SMG6-203ENST00000536871 KLHL3Q9UH77 587 aa12.59□□□□□ -0.39
SMG6-203ENST00000536871 GMEB2Q9UKD1 530 aa12.59□□□□□ -0.39
SMG6-203ENST00000536871 STUB1Q9UNE7 303 aa12.59□□□□□ -0.39
SMG6-203ENST00000536871 LOC100506127A0A0U1RQW1 187 aa12.58□□□□□ -0.4
SMG6-203ENST00000536871 FAM86C2PA6NEL3 165 aa12.58□□□□□ -0.4
SMG6-203ENST00000536871 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.58□□□□□ -0.4
SMG6-203ENST00000536871 NUDT21O43809 227 aaKnown RBP12.58□□□□□ -0.4
SMG6-203ENST00000536871 CAPZA2P47755 286 aa12.58□□□□□ -0.4
SMG6-203ENST00000536871 PPM1FP49593 454 aaPredicted RBP12.58□□□□□ -0.4
SMG6-203ENST00000536871 EMDP50402 254 aa12.58□□□□□ -0.4
SMG6-203ENST00000536871 GPLD1P80108 840 aa12.58□□□□□ -0.4
SMG6-203ENST00000536871 MAPK14Q16539 360 aa12.58□□□□□ -0.4
SMG6-203ENST00000536871 PTCRAQ6ISU1 281 aaPredicted RBP12.58□□□□□ -0.4
SMG6-203ENST00000536871 BMP8AQ7Z5Y6 402 aa12.58□□□□□ -0.4
SMG6-203ENST00000536871 IGFN1Q86VF2 1251 aa12.58□□□□□ -0.4
SMG6-203ENST00000536871 KMT5CQ86Y97 462 aa12.58□□□□□ -0.4
SMG6-203ENST00000536871 PLXDC1Q8IUK5 500 aa12.58□□□□□ -0.4
SMG6-203ENST00000536871 GALNT6Q8NCL4 622 aa12.58□□□□□ -0.4
SMG6-203ENST00000536871 PSD4Q8NDX1 1056 aa12.58□□□□□ -0.4
SMG6-203ENST00000536871 CLDN23Q96B33 292 aa12.58□□□□□ -0.4
SMG6-203ENST00000536871 PEX11GQ96HA9 241 aa12.58□□□□□ -0.4
SMG6-203ENST00000536871 AHCYL2Q96HN2 611 aaKnown RBP12.58□□□□□ -0.4
SMG6-203ENST00000536871 LRFN5Q96NI6 719 aa12.58□□□□□ -0.4
SMG6-203ENST00000536871 PRSS27Q9BQR3 290 aa12.58□□□□□ -0.4
SMG6-203ENST00000536871 CHCHD6Q9BRQ6 235 aa12.58□□□□□ -0.4
SMG6-203ENST00000536871 C2orf42Q9NWW7 574 aa12.58□□□□□ -0.4
SMG6-203ENST00000536871 HCN3Q9P1Z3 774 aa12.58□□□□□ -0.4
SMG6-203ENST00000536871 ZNF223Q9UK11 482 aaPredicted RBP12.58□□□□□ -0.4
SMG6-203ENST00000536871 SSR3Q9UNL2 185 aa12.58□□□□□ -0.4
SMG6-203ENST00000536871 A0A075B6Q4 140 aa12.57□□□□□ -0.4
SMG6-203ENST00000536871 ISPDA4D126 451 aa12.57□□□□□ -0.4
SMG6-203ENST00000536871 EFCAB7A8K855 629 aa12.57□□□□□ -0.4
SMG6-203ENST00000536871 HCN1O60741 890 aa12.57□□□□□ -0.4
SMG6-203ENST00000536871 SULT1C4O75897 302 aa12.57□□□□□ -0.4
SMG6-203ENST00000536871 THY1P04216 161 aa12.57□□□□□ -0.4
SMG6-203ENST00000536871 MSL3P1P0C860 447 aa12.57□□□□□ -0.4
SMG6-203ENST00000536871 GNSP15586 552 aa12.57□□□□□ -0.4
SMG6-203ENST00000536871 CPEP16870 476 aa12.57□□□□□ -0.4
SMG6-203ENST00000536871 HTR1FP30939 366 aa12.57□□□□□ -0.4
SMG6-203ENST00000536871 LCN1P31025 176 aa12.57□□□□□ -0.4
SMG6-203ENST00000536871 AFF3P51826 1226 aaKnown RBP12.57□□□□□ -0.4
SMG6-203ENST00000536871 ATP12AP54707 1039 aa12.57□□□□□ -0.4
SMG6-203ENST00000536871 CDH11P55287 796 aa12.57□□□□□ -0.4
SMG6-203ENST00000536871 BNC1Q01954 994 aa12.57□□□□□ -0.4
SMG6-203ENST00000536871 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.57□□□□□ -0.4
SMG6-203ENST00000536871 AADACL4Q5VUY2 407 aa12.57□□□□□ -0.4
SMG6-203ENST00000536871 FIGNL1Q6PIW4 674 aa12.57□□□□□ -0.4
SMG6-203ENST00000536871 SLITRK4Q8IW52 837 aa12.57□□□□□ -0.4
SMG6-203ENST00000536871 CENPSQ8N2Z9 138 aa12.57□□□□□ -0.4
SMG6-203ENST00000536871 MFSD4AQ8N468 514 aa12.57□□□□□ -0.4
SMG6-203ENST00000536871 SIMC1Q8NDZ2 872 aa12.57□□□□□ -0.4
SMG6-203ENST00000536871 OR8D4Q8NGM9 314 aa12.57□□□□□ -0.4
SMG6-203ENST00000536871 C1orf216Q8TAB5 229 aa12.57□□□□□ -0.4
SMG6-203ENST00000536871 MMABQ96EY8 250 aaPredicted RBP12.57□□□□□ -0.4
SMG6-203ENST00000536871 HSPA12BQ96MM6 686 aa12.57□□□□□ -0.4
SMG6-203ENST00000536871 PRR14Q9BWN1 585 aa12.57□□□□□ -0.4
SMG6-203ENST00000536871 MIR1-1HGQ9H1L0 117 aa12.57□□□□□ -0.4
SMG6-203ENST00000536871 OR51E2Q9H255 320 aa12.57□□□□□ -0.4
SMG6-203ENST00000536871 HHATLQ9HCP6 504 aa12.57□□□□□ -0.4
SMG6-203ENST00000536871 SIDT1Q9NXL6 827 aaKnown RBP12.57□□□□□ -0.4
SMG6-203ENST00000536871 MRTO4Q9UKD2 239 aaKnown RBP12.57□□□□□ -0.4
SMG6-203ENST00000536871 EXOGQ9Y2C4 368 aaKnown RBP12.57□□□□□ -0.4
SMG6-203ENST00000536871 A0A0B4J2E0 115 aa12.57□□□□□ -0.4
SMG6-203ENST00000536871 A0A1B0GX12 115 aa12.57□□□□□ -0.4
SMG6-203ENST00000536871 PEX12O00623 359 aa12.57□□□□□ -0.4
SMG6-203ENST00000536871 HCRTR1O43613 425 aa12.57□□□□□ -0.4
SMG6-203ENST00000536871 DUX1O43812 170 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms