RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 TIMM22Q9Y584 194 aa10.01□□□□□ -0.81
CLSTN3-206ENST00000535668 ALPK2Q86TB3 2170 aa10□□□□□ -0.81
CLSTN3-206ENST00000535668 POC1B-GALNT4F8VUJ3 575 aa10□□□□□ -0.81
CLSTN3-206ENST00000535668 NDUFB5O43674 189 aa10□□□□□ -0.81
CLSTN3-206ENST00000535668 TLX2O43763 284 aaPredicted RBP10□□□□□ -0.81
CLSTN3-206ENST00000535668 KCNK2O95069 426 aa10□□□□□ -0.81
CLSTN3-206ENST00000535668 OXSR1O95747 527 aaPredicted RBP10□□□□□ -0.81
CLSTN3-206ENST00000535668 TUBBP07437 444 aa10□□□□□ -0.81
CLSTN3-206ENST00000535668 FGF4P08620 206 aa10□□□□□ -0.81
CLSTN3-206ENST00000535668 UROSP10746 265 aa10□□□□□ -0.81
CLSTN3-206ENST00000535668 AGTR1P30556 359 aa10□□□□□ -0.81
CLSTN3-206ENST00000535668 GABRA3P34903 492 aa10□□□□□ -0.81
CLSTN3-206ENST00000535668 KCNJ5P48544 419 aa10□□□□□ -0.81
CLSTN3-206ENST00000535668 MANFP55145 182 aaKnown RBP10□□□□□ -0.81
CLSTN3-206ENST00000535668 SGCBQ16585 318 aa10□□□□□ -0.81
CLSTN3-206ENST00000535668 NCMAPQ5T1S8 102 aa10□□□□□ -0.81
CLSTN3-206ENST00000535668 PDSS1Q5T2R2 415 aa10□□□□□ -0.81
CLSTN3-206ENST00000535668 Q6ZSR9 355 aa10□□□□□ -0.81
CLSTN3-206ENST00000535668 GALNT10Q86SR1 603 aa10□□□□□ -0.81
CLSTN3-206ENST00000535668 DTX2Q86UW9 622 aa10□□□□□ -0.81
CLSTN3-206ENST00000535668 EIF1ADQ8N9N8 165 aaKnown RBP10□□□□□ -0.81
CLSTN3-206ENST00000535668 NOA1Q8NC60 698 aaKnown RBP10□□□□□ -0.81
CLSTN3-206ENST00000535668 POC1BQ8TC44 478 aa10□□□□□ -0.81
CLSTN3-206ENST00000535668 OIT3Q8WWZ8 545 aa10□□□□□ -0.81
CLSTN3-206ENST00000535668 GTPBP3Q969Y2 492 aaKnown RBP10□□□□□ -0.81
CLSTN3-206ENST00000535668 CPNE4Q96A23 557 aaPredicted RBP10□□□□□ -0.81
CLSTN3-206ENST00000535668 PERPQ96FX8 193 aa10□□□□□ -0.81
CLSTN3-206ENST00000535668 MS4A4EQ96PG1 132 aa10□□□□□ -0.81
CLSTN3-206ENST00000535668 KCNA7Q96RP8 456 aa10□□□□□ -0.81
CLSTN3-206ENST00000535668 STACQ99469 402 aa10□□□□□ -0.81
CLSTN3-206ENST00000535668 TRMOQ9BU70 441 aa10□□□□□ -0.81
CLSTN3-206ENST00000535668 ACTR6Q9GZN1 396 aa10□□□□□ -0.81
CLSTN3-206ENST00000535668 PPCSQ9HAB8 311 aa10□□□□□ -0.81
CLSTN3-206ENST00000535668 NGBQ9NPG2 151 aa10□□□□□ -0.81
CLSTN3-206ENST00000535668 OXSMQ9NWU1 459 aa10□□□□□ -0.81
CLSTN3-206ENST00000535668 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10□□□□□ -0.817e-6■■□□□ 13.1
CLSTN3-206ENST00000535668 A0A0J9YW62 118 aa9.99□□□□□ -0.81
CLSTN3-206ENST00000535668 INAFM1C9JVW0 142 aa9.99□□□□□ -0.81
CLSTN3-206ENST00000535668 NPIPB9F8W1W9 429 aa9.99□□□□□ -0.81
CLSTN3-206ENST00000535668 EIF1AYO14602 144 aaKnown RBP9.99□□□□□ -0.81
CLSTN3-206ENST00000535668 SEC14L5O43304 696 aa9.99□□□□□ -0.81
CLSTN3-206ENST00000535668 RIPK2O43353 540 aa9.99□□□□□ -0.81
CLSTN3-206ENST00000535668 URI1O94763 535 aaPredicted RBP9.99□□□□□ -0.81
CLSTN3-206ENST00000535668 GUSBP08236 651 aa9.99□□□□□ -0.81
CLSTN3-206ENST00000535668 THBS2P35442 1172 aa9.99□□□□□ -0.81
CLSTN3-206ENST00000535668 EIF1AXP47813 144 aaKnown RBP9.99□□□□□ -0.81
CLSTN3-206ENST00000535668 CTBP2P56545 445 aa9.99□□□□□ -0.81
CLSTN3-206ENST00000535668 SIRPAP78324 504 aa9.99□□□□□ -0.81
CLSTN3-206ENST00000535668 PPP2R2BQ00005 443 aa9.99□□□□□ -0.81
CLSTN3-206ENST00000535668 SLC18A2Q05940 514 aa9.99□□□□□ -0.81
CLSTN3-206ENST00000535668 ZNF844Q08AG5 666 aa9.99□□□□□ -0.81
CLSTN3-206ENST00000535668 ZNF239Q16600 458 aaKnown RBP9.99□□□□□ -0.81
CLSTN3-206ENST00000535668 CCDC153Q494R4 210 aa9.99□□□□□ -0.81
CLSTN3-206ENST00000535668 KLHL26Q53HC5 615 aa9.99□□□□□ -0.81
CLSTN3-206ENST00000535668 SFRP5Q5T4F7 317 aa9.99□□□□□ -0.81
CLSTN3-206ENST00000535668 FAM219BQ5XKK7 198 aa9.99□□□□□ -0.81
CLSTN3-206ENST00000535668 MFSD12Q6NUT3 480 aa9.99□□□□□ -0.81
CLSTN3-206ENST00000535668 TFAP2EQ6VUC0 442 aa9.99□□□□□ -0.81
CLSTN3-206ENST00000535668 P2RY8Q86VZ1 359 aa9.99□□□□□ -0.81
CLSTN3-206ENST00000535668 SLC43A2Q8N370 569 aa9.99□□□□□ -0.81
CLSTN3-206ENST00000535668 NATD1Q8N6N6 113 aa9.99□□□□□ -0.81
CLSTN3-206ENST00000535668 SLC16A11Q8NCK7 471 aa9.99□□□□□ -0.81
CLSTN3-206ENST00000535668 MNS1Q8NEH6 495 aa9.99□□□□□ -0.81
CLSTN3-206ENST00000535668 TOR1AIP2Q8NFQ8 470 aa9.99□□□□□ -0.81
CLSTN3-206ENST00000535668 ZFP28Q8NHY6 868 aa9.99□□□□□ -0.81
CLSTN3-206ENST00000535668 PIWIL2Q8TC59 973 aaKnown RBP9.99□□□□□ -0.81
CLSTN3-206ENST00000535668 PLPPR2Q96GM1 343 aa9.99□□□□□ -0.81
CLSTN3-206ENST00000535668 EGLN2Q96KS0 407 aa9.99□□□□□ -0.81
CLSTN3-206ENST00000535668 KLHL15Q96M94 604 aa9.99□□□□□ -0.81
CLSTN3-206ENST00000535668 EBPLQ9BY08 206 aa9.99□□□□□ -0.81
CLSTN3-206ENST00000535668 KLHL4Q9C0H6 718 aa9.99□□□□□ -0.81
CLSTN3-206ENST00000535668 HOXD1Q9GZZ0 328 aa9.99□□□□□ -0.81
CLSTN3-206ENST00000535668 REEP4Q9H6H4 257 aa9.99□□□□□ -0.81
CLSTN3-206ENST00000535668 L2HGDHQ9H9P8 463 aa9.99□□□□□ -0.81
CLSTN3-206ENST00000535668 MID1IP1Q9NPA3 183 aa9.99□□□□□ -0.81
CLSTN3-206ENST00000535668 TIGARQ9NQ88 270 aa9.99□□□□□ -0.81
CLSTN3-206ENST00000535668 C1orf109Q9NX04 203 aa9.99□□□□□ -0.81
CLSTN3-206ENST00000535668 KLHL13Q9P2N7 655 aa9.99□□□□□ -0.81
CLSTN3-206ENST00000535668 ICAM5Q9UMF0 924 aa9.99□□□□□ -0.81
CLSTN3-206ENST00000535668 GPC6Q9Y625 555 aaPredicted RBP9.99□□□□□ -0.81
CLSTN3-206ENST00000535668 GXYLT2A0PJZ3 443 aa9.98□□□□□ -0.81
CLSTN3-206ENST00000535668 GJE1A6NN92 205 aa9.98□□□□□ -0.81
CLSTN3-206ENST00000535668 SLC28A1O00337 649 aa9.98□□□□□ -0.81
CLSTN3-206ENST00000535668 PDPK1O15530 556 aa9.98□□□□□ -0.81
CLSTN3-206ENST00000535668 RGS14O43566 566 aa9.98□□□□□ -0.81
CLSTN3-206ENST00000535668 EFNA2O43921 213 aa9.98□□□□□ -0.81
CLSTN3-206ENST00000535668 CXCL13O43927 109 aa9.98□□□□□ -0.81
CLSTN3-206ENST00000535668 PGM3O95394 542 aa9.98□□□□□ -0.81
CLSTN3-206ENST00000535668 PROCP04070 461 aa9.98□□□□□ -0.81
CLSTN3-206ENST00000535668 YES1P07947 543 aa9.98□□□□□ -0.81
CLSTN3-206ENST00000535668 NEFHP12036 1026 aa9.98□□□□□ -0.81
CLSTN3-206ENST00000535668 DDX5P17844 614 aaKnown RBP9.98□□□□□ -0.81
CLSTN3-206ENST00000535668 ME2P23368 584 aa9.98□□□□□ -0.81
CLSTN3-206ENST00000535668 CRHR1P34998 444 aa9.98□□□□□ -0.81
CLSTN3-206ENST00000535668 IDUAP35475 653 aa9.98□□□□□ -0.81
CLSTN3-206ENST00000535668 ATP5J2P56134 94 aa9.98□□□□□ -0.81
CLSTN3-206ENST00000535668 CARD18P57730 90 aa9.98□□□□□ -0.81
CLSTN3-206ENST00000535668 RAC3P60763 192 aa9.98□□□□□ -0.81
CLSTN3-206ENST00000535668 RPS4XP62701 263 aaKnown RBP9.98□□□□□ -0.81
CLSTN3-206ENST00000535668 TNK1Q13470 666 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms