RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 HEXAP06865 529 aa11.89□□□□□ -0.51
CLSTN3-205ENST00000535452 ELK4P28324 431 aa11.89□□□□□ -0.51
CLSTN3-205ENST00000535452 MAD2L1Q13257 205 aaPredicted RBP11.89□□□□□ -0.51
CLSTN3-205ENST00000535452 CAPRIN1Q14444 709 aaKnown RBP11.89□□□□□ -0.51
CLSTN3-205ENST00000535452 TDRPQ86YL5 185 aa11.89□□□□□ -0.51
CLSTN3-205ENST00000535452 C10orf107Q8IVU9 208 aa11.89□□□□□ -0.51
CLSTN3-205ENST00000535452 LILRA2Q8N149 483 aa11.89□□□□□ -0.51
CLSTN3-205ENST00000535452 C4orf33Q8N1A6 199 aa11.89□□□□□ -0.51
CLSTN3-205ENST00000535452 RIBC1Q8N443 379 aaPredicted RBP11.89□□□□□ -0.51
CLSTN3-205ENST00000535452 CLHC1Q8NHS4 586 aa11.89□□□□□ -0.51
CLSTN3-205ENST00000535452 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.89□□□□□ -0.51
CLSTN3-205ENST00000535452 TRMT61AQ96FX7 289 aaKnown RBP11.89□□□□□ -0.51
CLSTN3-205ENST00000535452 EGLN2Q96KS0 407 aa11.89□□□□□ -0.51
CLSTN3-205ENST00000535452 KLHL15Q96M94 604 aa11.89□□□□□ -0.51
CLSTN3-205ENST00000535452 Q96MF0 132 aa11.89□□□□□ -0.51
CLSTN3-205ENST00000535452 RNF145Q96MT1 663 aa11.89□□□□□ -0.51
CLSTN3-205ENST00000535452 ESRP2Q9H6T0 727 aaKnown RBP11.89□□□□□ -0.51
CLSTN3-205ENST00000535452 TMEM185BQ9H7F4 350 aa11.89□□□□□ -0.51
CLSTN3-205ENST00000535452 L2HGDHQ9H9P8 463 aa11.89□□□□□ -0.51
CLSTN3-205ENST00000535452 PLSCR4Q9NRQ2 329 aa11.89□□□□□ -0.51
CLSTN3-205ENST00000535452 DUSP22Q9NRW4 184 aa11.89□□□□□ -0.51
CLSTN3-205ENST00000535452 SERINC1Q9NRX5 453 aa11.89□□□□□ -0.51
CLSTN3-205ENST00000535452 MED17Q9NVC6 651 aa11.89□□□□□ -0.51
CLSTN3-205ENST00000535452 FLRT3Q9NZU0 649 aa11.89□□□□□ -0.51
CLSTN3-205ENST00000535452 CLEC4AQ9UMR7 237 aa11.89□□□□□ -0.51
CLSTN3-205ENST00000535452 PRRC2AP48634 2157 aaKnown RBP11.89□□□□□ -0.51
CLSTN3-205ENST00000535452 ITPR3Q14573 2671 aa11.89□□□□□ -0.51
CLSTN3-205ENST00000535452 A0A1W2PQD3 144 aa11.88□□□□□ -0.51
CLSTN3-205ENST00000535452 C7orf72A4D263 438 aa11.88□□□□□ -0.51
CLSTN3-205ENST00000535452 DUXAA6NLW8 204 aa11.88□□□□□ -0.51
CLSTN3-205ENST00000535452 NPIPB8E9PQR5 432 aa11.88□□□□□ -0.51
CLSTN3-205ENST00000535452 H0YC42 278 aa11.88□□□□□ -0.51
CLSTN3-205ENST00000535452 SMAD7O15105 426 aaKnown RBP11.88□□□□□ -0.51
CLSTN3-205ENST00000535452 CXCL13O43927 109 aa11.88□□□□□ -0.51
CLSTN3-205ENST00000535452 NPHS1O60500 1241 aa11.88□□□□□ -0.51
CLSTN3-205ENST00000535452 SS18L1O75177 396 aaPredicted RBP11.88□□□□□ -0.51
CLSTN3-205ENST00000535452 FAM153BP0C7A2 387 aa11.88□□□□□ -0.51
CLSTN3-205ENST00000535452 SDC1P18827 310 aa11.88□□□□□ -0.51
CLSTN3-205ENST00000535452 ADH6P28332 368 aa11.88□□□□□ -0.51
CLSTN3-205ENST00000535452 SFTPDP35247 375 aa11.88□□□□□ -0.51
CLSTN3-205ENST00000535452 SOAT1P35610 550 aa11.88□□□□□ -0.51
CLSTN3-205ENST00000535452 SERPINB5P36952 375 aa11.88□□□□□ -0.51
CLSTN3-205ENST00000535452 CCR4P51679 360 aa11.88□□□□□ -0.51
CLSTN3-205ENST00000535452 TPD52P55327 224 aaPredicted RBP11.88□□□□□ -0.51
CLSTN3-205ENST00000535452 SUMO3P55854 103 aaPredicted RBP11.88□□□□□ -0.51
CLSTN3-205ENST00000535452 LASP1Q14847 261 aaKnown RBP11.88□□□□□ -0.51
CLSTN3-205ENST00000535452 MLC1Q15049 377 aa11.88□□□□□ -0.51
CLSTN3-205ENST00000535452 FAM153CQ494X1 144 aa11.88□□□□□ -0.51
CLSTN3-205ENST00000535452 MFSD12Q6NUT3 480 aa11.88□□□□□ -0.51
CLSTN3-205ENST00000535452 RNF165Q6ZSG1 346 aa11.88□□□□□ -0.51
CLSTN3-205ENST00000535452 Q71RC1 249 aaPredicted RBP11.88□□□□□ -0.51
CLSTN3-205ENST00000535452 SSX8Q7RTT4 187 aa11.88□□□□□ -0.51
CLSTN3-205ENST00000535452 GALNT10Q86SR1 603 aa11.88□□□□□ -0.51
CLSTN3-205ENST00000535452 TRABD2AQ86V40 505 aa11.88□□□□□ -0.51
CLSTN3-205ENST00000535452 SLC43A2Q8N370 569 aa11.88□□□□□ -0.51
CLSTN3-205ENST00000535452 FNDC5Q8NAU1 212 aa11.88□□□□□ -0.51
CLSTN3-205ENST00000535452 LRRN4CLQ8ND94 238 aa11.88□□□□□ -0.51
CLSTN3-205ENST00000535452 TOR1AIP2Q8NFQ8 470 aa11.88□□□□□ -0.51
CLSTN3-205ENST00000535452 TWIST2Q8WVJ9 160 aa11.88□□□□□ -0.51
CLSTN3-205ENST00000535452 OSTF1Q92882 214 aa11.88□□□□□ -0.51
CLSTN3-205ENST00000535452 GTPBP3Q969Y2 492 aaKnown RBP11.88□□□□□ -0.51
CLSTN3-205ENST00000535452 APOPT1Q96IL0 206 aa11.88□□□□□ -0.51
CLSTN3-205ENST00000535452 ACTRT3Q9BYD9 372 aa11.88□□□□□ -0.51
CLSTN3-205ENST00000535452 ACTR6Q9GZN1 396 aa11.88□□□□□ -0.51
CLSTN3-205ENST00000535452 C12orf49Q9H741 205 aa11.88□□□□□ -0.51
CLSTN3-205ENST00000535452 DLL4Q9NR61 685 aa11.88□□□□□ -0.51
CLSTN3-205ENST00000535452 GIN1Q9NXP7 522 aa11.88□□□□□ -0.51
CLSTN3-205ENST00000535452 EMCNQ9ULC0 261 aa11.88□□□□□ -0.51
CLSTN3-205ENST00000535452 GPC6Q9Y625 555 aaPredicted RBP11.88□□□□□ -0.51
CLSTN3-205ENST00000535452 MPDZO75970 2070 aa11.87□□□□□ -0.51
CLSTN3-205ENST00000535452 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.87□□□□□ -0.51
CLSTN3-205ENST00000535452 DEFB108AA8MXU0 73 aa11.87□□□□□ -0.51
CLSTN3-205ENST00000535452 SHISA8B8ZZ34 492 aa11.87□□□□□ -0.51
CLSTN3-205ENST00000535452 H7C1Q1 480 aa11.87□□□□□ -0.51
CLSTN3-205ENST00000535452 SCAMP2O15127 329 aaKnown RBP11.87□□□□□ -0.51
CLSTN3-205ENST00000535452 AQP8O94778 261 aa11.87□□□□□ -0.51
CLSTN3-205ENST00000535452 TP53P04637 393 aaPredicted RBP11.87□□□□□ -0.51
CLSTN3-205ENST00000535452 HMGN2P05204 90 aaKnown RBP11.87□□□□□ -0.51
CLSTN3-205ENST00000535452 IL11P20809 199 aa11.87□□□□□ -0.51
CLSTN3-205ENST00000535452 CCT3P49368 545 aaKnown RBP11.87□□□□□ -0.51
CLSTN3-205ENST00000535452 CBFBQ13951 182 aa11.87□□□□□ -0.51
CLSTN3-205ENST00000535452 DUSP5Q16690 384 aa11.87□□□□□ -0.51
CLSTN3-205ENST00000535452 PLPPR5Q32ZL2 321 aa11.87□□□□□ -0.51
CLSTN3-205ENST00000535452 RFTN2Q52LD8 501 aaPredicted RBP11.87□□□□□ -0.51
CLSTN3-205ENST00000535452 KANK2Q63ZY3 851 aa11.87□□□□□ -0.51
CLSTN3-205ENST00000535452 ZNF704Q6ZNC4 412 aaPredicted RBP11.87□□□□□ -0.51
CLSTN3-205ENST00000535452 GGNQ86UU5 652 aa11.87□□□□□ -0.51
CLSTN3-205ENST00000535452 GSPT2Q8IYD1 628 aaKnown RBP11.87□□□□□ -0.51
CLSTN3-205ENST00000535452 KIRREL3Q8IZU9 778 aa11.87□□□□□ -0.51
CLSTN3-205ENST00000535452 SLC16A11Q8NCK7 471 aa11.87□□□□□ -0.51
CLSTN3-205ENST00000535452 ATP6V1C2Q8NEY4 427 aa11.87□□□□□ -0.51
CLSTN3-205ENST00000535452 VPS37AQ8NEZ2 397 aa11.87□□□□□ -0.51
CLSTN3-205ENST00000535452 OR4C3Q8NH37 302 aa11.87□□□□□ -0.51
CLSTN3-205ENST00000535452 AGR3Q8TD06 166 aa11.87□□□□□ -0.51
CLSTN3-205ENST00000535452 EPS8L3Q8TE67 593 aaKnown RBP11.87□□□□□ -0.51
CLSTN3-205ENST00000535452 TMEM234Q8WY98 164 aa11.87□□□□□ -0.51
CLSTN3-205ENST00000535452 OR5P2Q8WZ92 322 aa11.87□□□□□ -0.51
CLSTN3-205ENST00000535452 ZHX1-C8orf76Q96EF9 292 aa11.87□□□□□ -0.51
CLSTN3-205ENST00000535452 PLPPR2Q96GM1 343 aa11.87□□□□□ -0.51
CLSTN3-205ENST00000535452 PIGUQ9H490 435 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms