RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 C8orf4Q9NR00 106 aa7.79□□□□□ -1.16
SFSWAP-202ENST00000535202 ARMC1Q9NVT9 282 aa7.79□□□□□ -1.16
SFSWAP-202ENST00000535202 PRELID1Q9Y255 219 aa7.79□□□□□ -1.16
SFSWAP-202ENST00000535202 PCDHGB3Q9Y5G1 929 aa7.79□□□□□ -1.16
SFSWAP-202ENST00000535202 NOX1Q9Y5S8 564 aa7.79□□□□□ -1.16
SFSWAP-202ENST00000535202 KIAA1549Q9HCM3 1950 aa7.79□□□□□ -1.16
SFSWAP-202ENST00000535202 CENPEQ02224 2701 aa7.78□□□□□ -1.16
SFSWAP-202ENST00000535202 OR6C70A6NIJ9 312 aa7.78□□□□□ -1.16
SFSWAP-202ENST00000535202 HSPB2A8KAH6 182 aa7.78□□□□□ -1.16
SFSWAP-202ENST00000535202 AHRRA9YTQ3 701 aa7.78□□□□□ -1.16
SFSWAP-202ENST00000535202 TO15178 435 aa7.78□□□□□ -1.16
SFSWAP-202ENST00000535202 SLC22A2O15244 555 aa7.78□□□□□ -1.16
SFSWAP-202ENST00000535202 ERN1O75460 977 aaKnown RBP7.78□□□□□ -1.16
SFSWAP-202ENST00000535202 EPPINO95925 133 aa7.78□□□□□ -1.16
SFSWAP-202ENST00000535202 JUNP05412 331 aaKnown RBP7.78□□□□□ -1.16
SFSWAP-202ENST00000535202 CCDC159P0C7I6 412 aa7.78□□□□□ -1.16
SFSWAP-202ENST00000535202 CT45A8P0DMV1 189 aa7.78□□□□□ -1.16
SFSWAP-202ENST00000535202 CT45A9P0DMV2 189 aa7.78□□□□□ -1.16
SFSWAP-202ENST00000535202 BMP7P18075 431 aa7.78□□□□□ -1.16
SFSWAP-202ENST00000535202 DDCP20711 480 aa7.78□□□□□ -1.16
SFSWAP-202ENST00000535202 BMP5P22003 454 aa7.78□□□□□ -1.16
SFSWAP-202ENST00000535202 IL12BP29460 328 aa7.78□□□□□ -1.16
SFSWAP-202ENST00000535202 NTSP30990 170 aa7.78□□□□□ -1.16
SFSWAP-202ENST00000535202 MPIP34949 423 aa7.78□□□□□ -1.16
SFSWAP-202ENST00000535202 CRHR1P34998 444 aa7.78□□□□□ -1.16
SFSWAP-202ENST00000535202 NCBP2P52298 156 aaKnown RBP eCLIP7.78□□□□□ -1.16
SFSWAP-202ENST00000535202 DNAJB13P59910 316 aa7.78□□□□□ -1.16
SFSWAP-202ENST00000535202 ZNF155Q12901 538 aaPredicted RBP7.78□□□□□ -1.16
SFSWAP-202ENST00000535202 SNTA1Q13424 505 aa7.78□□□□□ -1.16
SFSWAP-202ENST00000535202 SNTB1Q13884 538 aaKnown RBP7.78□□□□□ -1.16
SFSWAP-202ENST00000535202 CEBPEQ15744 281 aa7.78□□□□□ -1.16
SFSWAP-202ENST00000535202 HSPB2Q16082 182 aa7.78□□□□□ -1.16
SFSWAP-202ENST00000535202 PRSS53Q2L4Q9 553 aa7.78□□□□□ -1.16
SFSWAP-202ENST00000535202 CT45A2Q5DJT8 189 aa7.78□□□□□ -1.16
SFSWAP-202ENST00000535202 FAM209AQ5JX71 171 aa7.78□□□□□ -1.16
SFSWAP-202ENST00000535202 C6orf10Q5SRN2 563 aa7.78□□□□□ -1.16
SFSWAP-202ENST00000535202 DCST1Q5T197 706 aa7.78□□□□□ -1.16
SFSWAP-202ENST00000535202 LIPMQ5VYY2 423 aa7.78□□□□□ -1.16
SFSWAP-202ENST00000535202 LPCAT4Q643R3 524 aa7.78□□□□□ -1.16
SFSWAP-202ENST00000535202 VASNQ6EMK4 673 aa7.78□□□□□ -1.16
SFSWAP-202ENST00000535202 TMEM81Q6P7N7 255 aa7.78□□□□□ -1.16
SFSWAP-202ENST00000535202 TMEM107Q6UX40 140 aa7.78□□□□□ -1.16
SFSWAP-202ENST00000535202 NPSR1Q6W5P4 371 aa7.78□□□□□ -1.16
SFSWAP-202ENST00000535202 SH2D5Q6ZV89 423 aa7.78□□□□□ -1.16
SFSWAP-202ENST00000535202 LARP4Q71RC2 724 aaKnown RBP eCLIP7.78□□□□□ -1.16
SFSWAP-202ENST00000535202 CDH24Q86UP0 819 aa7.78□□□□□ -1.16
SFSWAP-202ENST00000535202 TMEM200AQ86VY9 491 aa7.78□□□□□ -1.16
SFSWAP-202ENST00000535202 CARM1Q86X55 608 aa7.78□□□□□ -1.16
SFSWAP-202ENST00000535202 LACC1Q8IV20 430 aa7.78□□□□□ -1.16
SFSWAP-202ENST00000535202 SLC44A2Q8IWA5 706 aaPredicted RBP7.78□□□□□ -1.16
SFSWAP-202ENST00000535202 PM20D2Q8IYS1 436 aa7.78□□□□□ -1.16
SFSWAP-202ENST00000535202 NAXEQ8NCW5 288 aa7.78□□□□□ -1.16
SFSWAP-202ENST00000535202 OR7G2Q8NG99 324 aa7.78□□□□□ -1.16
SFSWAP-202ENST00000535202 OR14L1PQ8NHC6 308 aa7.78□□□□□ -1.16
SFSWAP-202ENST00000535202 TBC1D15Q8TC07 691 aa7.78□□□□□ -1.16
SFSWAP-202ENST00000535202 PNPT1Q8TCS8 783 aaKnown RBP7.78□□□□□ -1.16
SFSWAP-202ENST00000535202 PYDC1Q8WXC3 89 aa7.78□□□□□ -1.16
SFSWAP-202ENST00000535202 ISOC1Q96CN7 298 aa7.78□□□□□ -1.16
SFSWAP-202ENST00000535202 NTNG2Q96CW9 530 aa7.78□□□□□ -1.16
SFSWAP-202ENST00000535202 C11orf24Q96F05 449 aaPredicted RBP7.78□□□□□ -1.16
SFSWAP-202ENST00000535202 SLC35A4Q96G79 324 aa7.78□□□□□ -1.16
SFSWAP-202ENST00000535202 VSTM2LQ96N03 204 aa7.78□□□□□ -1.16
SFSWAP-202ENST00000535202 TRIB1Q96RU8 372 aa7.78□□□□□ -1.16
SFSWAP-202ENST00000535202 ADOQ96SZ5 270 aa7.78□□□□□ -1.16
SFSWAP-202ENST00000535202 PRDM14Q9GZV8 571 aa7.78□□□□□ -1.16
SFSWAP-202ENST00000535202 TNFRSF12AQ9NP84 129 aa7.78□□□□□ -1.16
SFSWAP-202ENST00000535202 OXSMQ9NWU1 459 aa7.78□□□□□ -1.16
SFSWAP-202ENST00000535202 SIRT5Q9NXA8 310 aa7.78□□□□□ -1.16
SFSWAP-202ENST00000535202 MID2Q9UJV3 735 aa7.78□□□□□ -1.16
SFSWAP-202ENST00000535202 POMPQ9Y244 141 aa7.78□□□□□ -1.16
SFSWAP-202ENST00000535202 GPR55Q9Y2T6 319 aaPredicted RBP7.78□□□□□ -1.16
SFSWAP-202ENST00000535202 FIS1Q9Y3D6 152 aa7.78□□□□□ -1.16
SFSWAP-202ENST00000535202 OR10H1Q9Y4A9 318 aa7.78□□□□□ -1.16
SFSWAP-202ENST00000535202 FBN2P35556 2912 aa7.77□□□□□ -1.17
SFSWAP-202ENST00000535202 FAM172BPA6NC97 362 aa7.77□□□□□ -1.17
SFSWAP-202ENST00000535202 MYO1GB0I1T2 1018 aa7.77□□□□□ -1.17
SFSWAP-202ENST00000535202 DVL2O14641 736 aa7.77□□□□□ -1.17
SFSWAP-202ENST00000535202 PLOD3O60568 738 aa7.77□□□□□ -1.17
SFSWAP-202ENST00000535202 TSPAN2O60636 221 aa7.77□□□□□ -1.17
SFSWAP-202ENST00000535202 ABCB7O75027 752 aa7.77□□□□□ -1.17
SFSWAP-202ENST00000535202 SNNO75324 88 aaPredicted RBP7.77□□□□□ -1.17
SFSWAP-202ENST00000535202 IL2RAP01589 272 aa7.77□□□□□ -1.17
SFSWAP-202ENST00000535202 UROSP10746 265 aa7.77□□□□□ -1.17
SFSWAP-202ENST00000535202 ATP6V1B1P15313 513 aa7.77□□□□□ -1.17
SFSWAP-202ENST00000535202 CAPN3P20807 821 aa7.77□□□□□ -1.17
SFSWAP-202ENST00000535202 TCEA1P23193 301 aaKnown RBP7.77□□□□□ -1.17
SFSWAP-202ENST00000535202 UQCRC1P31930 480 aa7.77□□□□□ -1.17
SFSWAP-202ENST00000535202 MC3RP41968 323 aa7.77□□□□□ -1.17
SFSWAP-202ENST00000535202 DLX5P56178 289 aa7.77□□□□□ -1.17
SFSWAP-202ENST00000535202 CHRNEQ04844 493 aa7.77□□□□□ -1.17
SFSWAP-202ENST00000535202 EFR3AQ14156 821 aa7.77□□□□□ -1.17
SFSWAP-202ENST00000535202 SF3B4Q15427 424 aaKnown RBP eCLIP7.77□□□□□ -1.173e-21■■■■■ 58.8
SFSWAP-202ENST00000535202 KCNJ8Q15842 424 aa7.77□□□□□ -1.17
SFSWAP-202ENST00000535202 TRIM16LQ309B1 348 aa7.77□□□□□ -1.17
SFSWAP-202ENST00000535202 LSM12Q3MHD2 195 aaKnown RBP7.77□□□□□ -1.17
SFSWAP-202ENST00000535202 NHSL2Q5HYW2 709 aa7.77□□□□□ -1.17
SFSWAP-202ENST00000535202 CES4AQ5XG92 561 aa7.77□□□□□ -1.17
SFSWAP-202ENST00000535202 CLEC6AQ6EIG7 209 aa7.77□□□□□ -1.17
SFSWAP-202ENST00000535202 SIGIRRQ6IA17 410 aa7.77□□□□□ -1.17
SFSWAP-202ENST00000535202 OR5M10Q6IEU7 315 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms