RNA–Protein interactions for RNA: ENST00000534636.5

CTSB-233, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-233ENST00000534636 ATP6V1C1P21283 382 aa16.57■□□□□ 0.24
CTSB-233ENST00000534636 POU6F2P78424 691 aaPredicted RBP16.57■□□□□ 0.24
CTSB-233ENST00000534636 GUSBP1Q15486 140 aa16.57■□□□□ 0.24
CTSB-233ENST00000534636 ACKR1Q16570 336 aa16.57■□□□□ 0.24
CTSB-233ENST00000534636 DUSP5Q16690 384 aa16.57■□□□□ 0.24
CTSB-233ENST00000534636 Q5PR19 223 aa16.57■□□□□ 0.24
CTSB-233ENST00000534636 C20orf204Q6ZNR8 217 aa16.57■□□□□ 0.24
CTSB-233ENST00000534636 ESPNLQ6ZVH7 1005 aa16.57■□□□□ 0.24
CTSB-233ENST00000534636 STK32CQ86UX6 486 aa16.57■□□□□ 0.24
CTSB-233ENST00000534636 CXorf67Q86X51 503 aaPredicted RBP16.57■□□□□ 0.24
CTSB-233ENST00000534636 LRRC75A-AS1Q8N1F1 130 aa16.57■□□□□ 0.24
CTSB-233ENST00000534636 OR4C3Q8NH37 302 aa16.57■□□□□ 0.24
CTSB-233ENST00000534636 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.57■□□□□ 0.242e-8■□□□□ 11
CTSB-233ENST00000534636 TRIM44Q96DX7 344 aaPredicted RBP16.57■□□□□ 0.24
CTSB-233ENST00000534636 SH3YL1Q96HL8 342 aaPredicted RBP16.57■□□□□ 0.24
CTSB-233ENST00000534636 RNF145Q96MT1 663 aa16.57■□□□□ 0.24
CTSB-233ENST00000534636 TUBB1Q9H4B7 451 aa16.57■□□□□ 0.24
CTSB-233ENST00000534636 GLRX2Q9NS18 164 aa16.57■□□□□ 0.24
CTSB-233ENST00000534636 ZCCHC3Q9NUD5 404 aaKnown RBP16.57■□□□□ 0.24
CTSB-233ENST00000534636 MED17Q9NVC6 651 aa16.57■□□□□ 0.24
CTSB-233ENST00000534636 SNX8Q9Y5X2 465 aa16.57■□□□□ 0.24
CTSB-233ENST00000534636 NUP214P35658 2090 aaPredicted RBP16.57■□□□□ 0.24
CTSB-233ENST00000534636 FAM171A2A8MVW0 826 aa16.56■□□□□ 0.24
CTSB-233ENST00000534636 TNFSF11O14788 317 aa16.56■□□□□ 0.24
CTSB-233ENST00000534636 SCAMP2O15127 329 aaKnown RBP16.56■□□□□ 0.24
CTSB-233ENST00000534636 SIAH2O43255 324 aa16.56■□□□□ 0.24
CTSB-233ENST00000534636 NPHS1O60500 1241 aa16.56■□□□□ 0.24
CTSB-233ENST00000534636 BCKDHAP12694 445 aa16.56■□□□□ 0.24
CTSB-233ENST00000534636 HOXB4P17483 251 aaPredicted RBP16.56■□□□□ 0.24
CTSB-233ENST00000534636 RAC1P63000 192 aa16.56■□□□□ 0.24
CTSB-233ENST00000534636 MLC1Q15049 377 aa16.56■□□□□ 0.24
CTSB-233ENST00000534636 PLPPR5Q32ZL2 321 aa16.56■□□□□ 0.24
CTSB-233ENST00000534636 ZNF527Q8NB42 609 aa16.56■□□□□ 0.24
CTSB-233ENST00000534636 OR2V1Q8NHB1 315 aa16.56■□□□□ 0.24
CTSB-233ENST00000534636 FAM120BQ96EK7 910 aaKnown RBP16.56■□□□□ 0.24
CTSB-233ENST00000534636 REXO5Q96IC2 774 aaKnown RBP16.56■□□□□ 0.24
CTSB-233ENST00000534636 PPP3R2Q96LZ3 170 aa16.56■□□□□ 0.24
CTSB-233ENST00000534636 STACQ99469 402 aa16.56■□□□□ 0.24
CTSB-233ENST00000534636 BTBD2Q9BX70 525 aa16.56■□□□□ 0.24
CTSB-233ENST00000534636 MKS1Q9NXB0 559 aa16.56■□□□□ 0.24
CTSB-233ENST00000534636 CLEC4AQ9UMR7 237 aa16.56■□□□□ 0.24
CTSB-233ENST00000534636 A0A1W2PQD3 144 aa16.55■□□□□ 0.24
CTSB-233ENST00000534636 TLDC2A0PJX2 215 aa16.55■□□□□ 0.24
CTSB-233ENST00000534636 PIP5K1BO14986 540 aa16.55■□□□□ 0.24
CTSB-233ENST00000534636 SS18L1O75177 396 aaPredicted RBP16.55■□□□□ 0.24
CTSB-233ENST00000534636 CHRNGP07510 517 aa16.55■□□□□ 0.24
CTSB-233ENST00000534636 KRT16P08779 473 aa16.55■□□□□ 0.24
CTSB-233ENST00000534636 EFNA1P20827 205 aaPredicted RBP16.55■□□□□ 0.24
CTSB-233ENST00000534636 EIF1P41567 113 aaKnown RBP16.55■□□□□ 0.24
CTSB-233ENST00000534636 SLC6A8P48029 635 aa16.55■□□□□ 0.24
CTSB-233ENST00000534636 LASP1Q14847 261 aaKnown RBP16.55■□□□□ 0.24
CTSB-233ENST00000534636 SPDYE7PQ495Y7 208 aa16.55■□□□□ 0.24
CTSB-233ENST00000534636 ATP6AP1LQ52LC2 224 aa16.55■□□□□ 0.24
CTSB-233ENST00000534636 CCNJQ5T5M9 372 aa16.55■□□□□ 0.24
CTSB-233ENST00000534636 CPTPQ5TA50 214 aa16.55■□□□□ 0.24
CTSB-233ENST00000534636 ANKRD34AQ69YU3 496 aa16.55■□□□□ 0.24
CTSB-233ENST00000534636 HBMQ6B0K9 141 aa16.55■□□□□ 0.24
CTSB-233ENST00000534636 GTF2IRD2BQ6EKJ0 949 aa16.55■□□□□ 0.24
CTSB-233ENST00000534636 GTF2IRD2Q86UP8 949 aa16.55■□□□□ 0.24
CTSB-233ENST00000534636 KRTAP1-3Q8IUG1 177 aa16.55■□□□□ 0.24
CTSB-233ENST00000534636 RIBC1Q8N443 379 aaPredicted RBP16.55■□□□□ 0.24
CTSB-233ENST00000534636 LRRN4CLQ8ND94 238 aa16.55■□□□□ 0.24
CTSB-233ENST00000534636 B4GALNT2Q8NHY0 566 aa16.55■□□□□ 0.24
CTSB-233ENST00000534636 FAM110BQ8TC76 370 aa16.55■□□□□ 0.24
CTSB-233ENST00000534636 AGR3Q8TD06 166 aa16.55■□□□□ 0.24
CTSB-233ENST00000534636 OTUB1Q96FW1 271 aaPredicted RBP16.55■□□□□ 0.24
CTSB-233ENST00000534636 C16orf58Q96GQ5 468 aa16.55■□□□□ 0.24
CTSB-233ENST00000534636 TMEM185BQ9H7F4 350 aa16.55■□□□□ 0.24
CTSB-233ENST00000534636 DUSP22Q9NRW4 184 aa16.55■□□□□ 0.24
CTSB-233ENST00000534636 ATAD3AQ9NVI7 634 aa16.55■□□□□ 0.24
CTSB-233ENST00000534636 TRAF6Q9Y4K3 522 aa16.55■□□□□ 0.24
CTSB-233ENST00000534636 TLN2Q9Y4G6 2542 aa16.55■□□□□ 0.24
CTSB-233ENST00000534636 TMEM233B4DJY2 109 aa16.54■□□□□ 0.24
CTSB-233ENST00000534636 H3BNH8 94 aa16.54■□□□□ 0.24
CTSB-233ENST00000534636 ADAMDEC1O15204 470 aa16.54■□□□□ 0.24
CTSB-233ENST00000534636 CXCL13O43927 109 aa16.54■□□□□ 0.24
CTSB-233ENST00000534636 NUDT14O95848 222 aa16.54■□□□□ 0.24
CTSB-233ENST00000534636 OPN1LWP04000 364 aa16.54■□□□□ 0.24
CTSB-233ENST00000534636 HMGN2P05204 90 aaKnown RBP16.54■□□□□ 0.24
CTSB-233ENST00000534636 FGF4P08620 206 aa16.54■□□□□ 0.24
CTSB-233ENST00000534636 PABPC4LP0CB38 370 aaKnown RBP16.54■□□□□ 0.24
CTSB-233ENST00000534636 ALDH3A1P30838 453 aa16.54■□□□□ 0.24
CTSB-233ENST00000534636 LTBQ06643 244 aa16.54■□□□□ 0.24
CTSB-233ENST00000534636 TP53BP2Q13625 1128 aa16.54■□□□□ 0.24
CTSB-233ENST00000534636 ARL13AQ5H913 290 aaPredicted RBP16.54■□□□□ 0.24
CTSB-233ENST00000534636 BEX5Q5H9J7 111 aa16.54■□□□□ 0.24
CTSB-233ENST00000534636 CLEC9AQ6UXN8 241 aa16.54■□□□□ 0.24
CTSB-233ENST00000534636 BEND4Q6ZU67 534 aa16.54■□□□□ 0.24
CTSB-233ENST00000534636 MTERF4Q7Z6M4 381 aaKnown RBP16.54■□□□□ 0.24
CTSB-233ENST00000534636 ZAR1Q86SH2 424 aa16.54■□□□□ 0.24
CTSB-233ENST00000534636 OR56A1Q8NGH5 318 aa16.54■□□□□ 0.24
CTSB-233ENST00000534636 PHOSPHO1Q8TCT1 267 aa16.54■□□□□ 0.24
CTSB-233ENST00000534636 CDS1Q92903 461 aa16.54■□□□□ 0.24
CTSB-233ENST00000534636 ADGRG7Q96K78 797 aa16.54■□□□□ 0.24
CTSB-233ENST00000534636 KLHL15Q96M94 604 aa16.54■□□□□ 0.24
CTSB-233ENST00000534636 PRPF18Q99633 342 aaKnown RBP16.54■□□□□ 0.24
CTSB-233ENST00000534636 TIGARQ9NQ88 270 aa16.54■□□□□ 0.24
CTSB-233ENST00000534636 PLSCR4Q9NRQ2 329 aa16.54■□□□□ 0.24
CTSB-233ENST00000534636 GIN1Q9NXP7 522 aa16.54■□□□□ 0.24
CTSB-233ENST00000534636 ATP6V1HQ9UI12 483 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms