RNA–Protein interactions for RNA: ENST00000534591.1

VPS51-216, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 5

Gene VPS51, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-216ENST00000534591 DGCR6LQ9BY27 220 aa15.75■□□□□ 0.11
VPS51-216ENST00000534591 NXF5Q9H1B4 397 aaKnown RBP15.75■□□□□ 0.11
VPS51-216ENST00000534591 C19orf25Q9UFG5 118 aaPredicted RBP15.75■□□□□ 0.11
VPS51-216ENST00000534591 TESQ9UGI8 421 aaKnown RBP15.75■□□□□ 0.11
VPS51-216ENST00000534591 NDRG4Q9ULP0 352 aaKnown RBP15.75■□□□□ 0.11
VPS51-216ENST00000534591 PPIEQ9UNP9 301 aaKnown RBP15.75■□□□□ 0.11
VPS51-216ENST00000534591 CFAP47Q6ZTR5 3102 aa15.75■□□□□ 0.11
VPS51-216ENST00000534591 SAGE2PA6NJ88 616 aa15.74■□□□□ 0.11
VPS51-216ENST00000534591 C9J4A7 227 aa15.74■□□□□ 0.11
VPS51-216ENST00000534591 ZNF28P17035 718 aa15.74■□□□□ 0.11
VPS51-216ENST00000534591 GPR143P51810 404 aa15.74■□□□□ 0.11
VPS51-216ENST00000534591 INSM1Q01101 510 aaPredicted RBP15.74■□□□□ 0.11
VPS51-216ENST00000534591 SEC23BQ15437 767 aa15.74■□□□□ 0.11
VPS51-216ENST00000534591 NNATQ16517 81 aa15.74■□□□□ 0.11
VPS51-216ENST00000534591 ST3GAL2Q16842 350 aa15.74■□□□□ 0.11
VPS51-216ENST00000534591 DCAF12Q5T6F0 453 aa15.74■□□□□ 0.11
VPS51-216ENST00000534591 FAAH2Q6GMR7 532 aa15.74■□□□□ 0.11
VPS51-216ENST00000534591 LCN10Q6JVE6 187 aa15.74■□□□□ 0.11
VPS51-216ENST00000534591 TSPYL5Q86VY4 417 aaPredicted RBP15.74■□□□□ 0.11
VPS51-216ENST00000534591 ZNF786Q8N393 782 aa15.74■□□□□ 0.11
VPS51-216ENST00000534591 APOL4Q9BPW4 351 aa15.74■□□□□ 0.11
VPS51-216ENST00000534591 NIPSNAP1Q9BPW8 284 aa15.74■□□□□ 0.11
VPS51-216ENST00000534591 CRB3Q9BUF7 120 aa15.74■□□□□ 0.11
VPS51-216ENST00000534591 ULBP3Q9BZM4 244 aa15.74■□□□□ 0.11
VPS51-216ENST00000534591 ING2Q9H160 280 aa15.74■□□□□ 0.11
VPS51-216ENST00000534591 LOXL2Q9Y4K0 774 aa15.74■□□□□ 0.11
VPS51-216ENST00000534591 GMPPBQ9Y5P6 360 aa15.74■□□□□ 0.11
VPS51-216ENST00000534591 ANKRD11Q6UB99 2663 aaPredicted RBP15.74■□□□□ 0.11
VPS51-216ENST00000534591 APC2O95996 2303 aa15.74■□□□□ 0.11
VPS51-216ENST00000534591 CPSF4LA6NMK7 179 aaKnown RBP15.73■□□□□ 0.11
VPS51-216ENST00000534591 OR10H3O60404 316 aa15.73■□□□□ 0.11
VPS51-216ENST00000534591 CNOT3O75175 753 aaKnown RBP15.73■□□□□ 0.11
VPS51-216ENST00000534591 GASTP01350 101 aa15.73■□□□□ 0.11
VPS51-216ENST00000534591 IFNGR2P38484 337 aa15.73■□□□□ 0.11
VPS51-216ENST00000534591 CLK3P49761 638 aaKnown RBP15.73■□□□□ 0.11
VPS51-216ENST00000534591 UGT2B15P54855 530 aa15.73■□□□□ 0.11
VPS51-216ENST00000534591 ESRRGP62508 458 aa15.73■□□□□ 0.11
VPS51-216ENST00000534591 FGFBP1Q14512 234 aa15.73■□□□□ 0.11
VPS51-216ENST00000534591 HES3Q5TGS1 186 aa15.73■□□□□ 0.11
VPS51-216ENST00000534591 TMEM205Q6UW68 189 aa15.73■□□□□ 0.11
VPS51-216ENST00000534591 C9orf40Q8IXQ3 194 aa15.73■□□□□ 0.11
VPS51-216ENST00000534591 ZNF527Q8NB42 609 aa15.73■□□□□ 0.11
VPS51-216ENST00000534591 B3GNT7Q8NFL0 401 aa15.73■□□□□ 0.11
VPS51-216ENST00000534591 ADAMTS16Q8TE57 1224 aa15.73■□□□□ 0.11
VPS51-216ENST00000534591 HSPBAP1Q96EW2 488 aa15.73■□□□□ 0.11
VPS51-216ENST00000534591 LIN37Q96GY3 246 aaPredicted RBP15.73■□□□□ 0.11
VPS51-216ENST00000534591 HRASLS5Q96KN8 279 aa15.73■□□□□ 0.11
VPS51-216ENST00000534591 ZNF559Q9BR84 538 aa15.73■□□□□ 0.11
VPS51-216ENST00000534591 MRPS26Q9BYN8 205 aaKnown RBP15.73■□□□□ 0.11
VPS51-216ENST00000534591 UCK2Q9BZX2 261 aa15.73■□□□□ 0.11
VPS51-216ENST00000534591 SEMA4CQ9C0C4 833 aa15.73■□□□□ 0.11
VPS51-216ENST00000534591 WWTR1Q9GZV5 400 aa15.73■□□□□ 0.11
VPS51-216ENST00000534591 DSPP15924 2871 aaKnown RBP15.73■□□□□ 0.11
VPS51-216ENST00000534591 TRAPPC13A5PLN9 417 aa15.73■□□□□ 0.11
VPS51-216ENST00000534591 SEC24DO94855 1032 aaPredicted RBP15.73■□□□□ 0.11
VPS51-216ENST00000534591 CD63P08962 238 aa15.73■□□□□ 0.11
VPS51-216ENST00000534591 CYP4B1P13584 511 aa15.73■□□□□ 0.11
VPS51-216ENST00000534591 RPP38P78345 283 aaKnown RBP15.73■□□□□ 0.11
VPS51-216ENST00000534591 COX10Q12887 443 aa15.73■□□□□ 0.11
VPS51-216ENST00000534591 ISXQ2M1V0 245 aa15.73■□□□□ 0.11
VPS51-216ENST00000534591 PGBD2Q6P3X8 592 aa15.73■□□□□ 0.11
VPS51-216ENST00000534591 CD300LDQ6UXZ3 194 aa15.73■□□□□ 0.11
VPS51-216ENST00000534591 ZNF517Q6ZMY9 492 aaPredicted RBP15.73■□□□□ 0.11
VPS51-216ENST00000534591 CPEB2Q7Z5Q1 589 aaKnown RBP15.73■□□□□ 0.11
VPS51-216ENST00000534591 GALNT15Q8N3T1 639 aa15.73■□□□□ 0.11
VPS51-216ENST00000534591 ZNF614Q8N883 585 aa15.73■□□□□ 0.11
VPS51-216ENST00000534591 ZNF441Q8N8Z8 693 aa15.73■□□□□ 0.11
VPS51-216ENST00000534591 NFAM1Q8NET5 270 aaPredicted RBP15.73■□□□□ 0.11
VPS51-216ENST00000534591 OR4K5Q8NGD3 323 aa15.73■□□□□ 0.11
VPS51-216ENST00000534591 FBLIM1Q8WUP2 373 aa15.73■□□□□ 0.11
VPS51-216ENST00000534591 MR1Q95460 341 aa15.73■□□□□ 0.11
VPS51-216ENST00000534591 GTPBP3Q969Y2 492 aaKnown RBP15.73■□□□□ 0.11
VPS51-216ENST00000534591 TP53INP1Q96A56 240 aa15.73■□□□□ 0.11
VPS51-216ENST00000534591 SLC41A3Q96GZ6 507 aa15.73■□□□□ 0.11
VPS51-216ENST00000534591 GAL3ST4Q96RP7 486 aa15.73■□□□□ 0.11
VPS51-216ENST00000534591 UBQLN4Q9NRR5 601 aa15.73■□□□□ 0.11
VPS51-216ENST00000534591 SLC35A3Q9Y2D2 325 aa15.73■□□□□ 0.11
VPS51-216ENST00000534591 ACACAQ13085 2346 aa15.73■□□□□ 0.11
VPS51-216ENST00000534591 TRIM64A6NGJ6 449 aa15.72■□□□□ 0.11
VPS51-216ENST00000534591 SMIM18P0DKX4 95 aa15.72■□□□□ 0.11
VPS51-216ENST00000534591 CDK4P11802 303 aa15.72■□□□□ 0.11
VPS51-216ENST00000534591 ADH7P40394 386 aa15.72■□□□□ 0.11
VPS51-216ENST00000534591 NUP107P57740 925 aa15.72■□□□□ 0.11
VPS51-216ENST00000534591 ISL1P61371 349 aa15.72■□□□□ 0.11
VPS51-216ENST00000534591 HOXC5Q00444 222 aa15.72■□□□□ 0.11
VPS51-216ENST00000534591 FOXD4Q12950 439 aaPredicted RBP15.72■□□□□ 0.11
VPS51-216ENST00000534591 TOP3AQ13472 1001 aaPredicted RBP15.72■□□□□ 0.11
VPS51-216ENST00000534591 CAMK2BQ13554 666 aa15.72■□□□□ 0.11
VPS51-216ENST00000534591 RAPSNQ13702 412 aa15.72■□□□□ 0.11
VPS51-216ENST00000534591 KLHL26Q53HC5 615 aa15.72■□□□□ 0.11
VPS51-216ENST00000534591 RBM48Q5RL73 367 aaKnown RBP15.72■□□□□ 0.11
VPS51-216ENST00000534591 PAPD4Q6PIY7 484 aaKnown RBP15.72■□□□□ 0.11
VPS51-216ENST00000534591 KLHL17Q6TDP4 642 aa15.72■□□□□ 0.11
VPS51-216ENST00000534591 FAM198BQ6UWH4 519 aa15.72■□□□□ 0.11
VPS51-216ENST00000534591 RAB11FIP2Q7L804 512 aa15.72■□□□□ 0.11
VPS51-216ENST00000534591 ZNF550Q7Z398 422 aa15.72■□□□□ 0.11
VPS51-216ENST00000534591 GDF7Q7Z4P5 450 aa15.72■□□□□ 0.11
VPS51-216ENST00000534591 ZNF440Q8IYI8 595 aa15.72■□□□□ 0.11
VPS51-216ENST00000534591 SLC34A3Q8N130 599 aa15.72■□□□□ 0.11
VPS51-216ENST00000534591 ACOT11Q8WXI4 607 aaPredicted RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms