RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 DNASE1P24855 282 aa16.47■□□□□ 0.23
PHRF1-205ENST00000533464 TNFRSF4P43489 277 aa16.47■□□□□ 0.23
PHRF1-205ENST00000533464 ERVK-25P63136 954 aa16.47■□□□□ 0.23
PHRF1-205ENST00000533464 KCNJ10P78508 379 aa16.47■□□□□ 0.23
PHRF1-205ENST00000533464 GXYLT1Q4G148 440 aa16.47■□□□□ 0.23
PHRF1-205ENST00000533464 NLGN4XQ8N0W4 816 aa16.47■□□□□ 0.23
PHRF1-205ENST00000533464 MYEOVQ96EZ4 313 aa16.47■□□□□ 0.23
PHRF1-205ENST00000533464 SLC6A7Q99884 636 aa16.47■□□□□ 0.23
PHRF1-205ENST00000533464 POT1Q9NUX5 634 aa16.47■□□□□ 0.23
PHRF1-205ENST00000533464 OLAHQ9NV23 265 aa16.47■□□□□ 0.23
PHRF1-205ENST00000533464 PAQR5Q9NXK6 330 aaPredicted RBP16.47■□□□□ 0.23
PHRF1-205ENST00000533464 THAP10Q9P2Z0 257 aaPredicted RBP16.47■□□□□ 0.23
PHRF1-205ENST00000533464 GASTP01350 101 aa16.47■□□□□ 0.23
PHRF1-205ENST00000533464 CD38P28907 300 aa16.47■□□□□ 0.23
PHRF1-205ENST00000533464 PRKXP51817 358 aa16.47■□□□□ 0.23
PHRF1-205ENST00000533464 CCINQ13939 588 aa16.47■□□□□ 0.23
PHRF1-205ENST00000533464 CDNFQ49AH0 187 aa16.47■□□□□ 0.23
PHRF1-205ENST00000533464 FAM83HQ6ZRV2 1179 aaPredicted RBP16.47■□□□□ 0.23
PHRF1-205ENST00000533464 TMEM246Q9BRR3 403 aa16.47■□□□□ 0.23
PHRF1-205ENST00000533464 NAA11Q9BSU3 229 aaPredicted RBP16.47■□□□□ 0.23
PHRF1-205ENST00000533464 NCDNQ9UBB6 729 aa16.47■□□□□ 0.23
PHRF1-205ENST00000533464 ARID1BQ8NFD5 2236 aaPredicted RBP16.47■□□□□ 0.23
PHRF1-205ENST00000533464 MYOGP15173 224 aa16.47■□□□□ 0.23
PHRF1-205ENST00000533464 CD6P30203 668 aa16.47■□□□□ 0.23
PHRF1-205ENST00000533464 EMP2P54851 167 aa16.47■□□□□ 0.23
PHRF1-205ENST00000533464 ZNF91Q05481 1191 aa16.47■□□□□ 0.23
PHRF1-205ENST00000533464 MFSD13AQ14CX5 517 aa16.47■□□□□ 0.23
PHRF1-205ENST00000533464 HENMT1Q5T8I9 393 aaKnown RBP16.47■□□□□ 0.23
PHRF1-205ENST00000533464 ASCC1Q8N9N2 400 aaKnown RBP16.47■□□□□ 0.23
PHRF1-205ENST00000533464 BCL7CQ8WUZ0 217 aaPredicted RBP16.47■□□□□ 0.23
PHRF1-205ENST00000533464 BTBD2Q9BX70 525 aa16.47■□□□□ 0.23
PHRF1-205ENST00000533464 HDAC8Q9BY41 377 aa16.47■□□□□ 0.23
PHRF1-205ENST00000533464 FAIMQ9NVQ4 179 aa16.47■□□□□ 0.23
PHRF1-205ENST00000533464 VDAC3Q9Y277 283 aa16.47■□□□□ 0.23
PHRF1-205ENST00000533464 APOC1P02654 83 aa16.47■□□□□ 0.23
PHRF1-205ENST00000533464 ZNF43P17038 809 aa16.47■□□□□ 0.23
PHRF1-205ENST00000533464 SLC6A8P48029 635 aa16.47■□□□□ 0.23
PHRF1-205ENST00000533464 RPS15P62841 145 aaKnown RBP16.47■□□□□ 0.23
PHRF1-205ENST00000533464 CNIH2Q6PI25 160 aa16.47■□□□□ 0.23
PHRF1-205ENST00000533464 ANKRD33Q7Z3H0 272 aa16.47■□□□□ 0.23
PHRF1-205ENST00000533464 CPNE5Q9HCH3 593 aa16.47■□□□□ 0.23
PHRF1-205ENST00000533464 HHATLQ9HCP6 504 aa16.47■□□□□ 0.23
PHRF1-205ENST00000533464 B4GALT7Q9UBV7 327 aa16.47■□□□□ 0.23
PHRF1-205ENST00000533464 NUFIP1Q9UHK0 495 aaKnown RBP16.47■□□□□ 0.23
PHRF1-205ENST00000533464 USP54Q70EL1 1684 aa16.46■□□□□ 0.23
PHRF1-205ENST00000533464 HBQ1P09105 142 aa16.46■□□□□ 0.23
PHRF1-205ENST00000533464 OTX2P32243 289 aa16.46■□□□□ 0.23
PHRF1-205ENST00000533464 OR1Q1Q15612 314 aa16.46■□□□□ 0.23
PHRF1-205ENST00000533464 COX20Q5RI15 118 aa16.46■□□□□ 0.23
PHRF1-205ENST00000533464 SLC35A3Q9Y2D2 325 aa16.46■□□□□ 0.23
PHRF1-205ENST00000533464 AK6Q9Y3D8 172 aaKnown RBP16.46■□□□□ 0.23
PHRF1-205ENST00000533464 FUOMA2VDF0 154 aa16.46■□□□□ 0.23
PHRF1-205ENST00000533464 CHP2O43745 196 aa16.46■□□□□ 0.23
PHRF1-205ENST00000533464 NUDT1P36639 197 aa16.46■□□□□ 0.23
PHRF1-205ENST00000533464 RBMXP38159 391 aaKnown RBP16.46■□□□□ 0.23
PHRF1-205ENST00000533464 RAB11BQ15907 218 aa16.46■□□□□ 0.23
PHRF1-205ENST00000533464 PGGHGQ32M88 737 aa16.46■□□□□ 0.23
PHRF1-205ENST00000533464 NHSL2Q5HYW2 709 aa16.46■□□□□ 0.23
PHRF1-205ENST00000533464 EEF1A1P5Q5VTE0 462 aa16.46■□□□□ 0.23
PHRF1-205ENST00000533464 SH2D5Q6ZV89 423 aa16.46■□□□□ 0.23
PHRF1-205ENST00000533464 TMEM163Q8TC26 289 aa16.46■□□□□ 0.23
PHRF1-205ENST00000533464 NXPE3Q969Y0 559 aa16.46■□□□□ 0.23
PHRF1-205ENST00000533464 DDIT4LQ96D03 193 aa16.46■□□□□ 0.23
PHRF1-205ENST00000533464 KLHL15Q96M94 604 aa16.46■□□□□ 0.23
PHRF1-205ENST00000533464 A8MVJ9 347 aa16.46■□□□□ 0.23
PHRF1-205ENST00000533464 VNN2O95498 520 aa16.46■□□□□ 0.23
PHRF1-205ENST00000533464 P04436 131 aa16.46■□□□□ 0.23
PHRF1-205ENST00000533464 FBXO45P0C2W1 286 aa16.46■□□□□ 0.23
PHRF1-205ENST00000533464 PVALBP20472 110 aaPredicted RBP16.46■□□□□ 0.23
PHRF1-205ENST00000533464 SPCS2Q15005 226 aa16.46■□□□□ 0.23
PHRF1-205ENST00000533464 CHRFAM7AQ494W8 412 aa16.46■□□□□ 0.23
PHRF1-205ENST00000533464 PRAMEF8Q5VWM4 474 aa16.46■□□□□ 0.23
PHRF1-205ENST00000533464 PRAMEF7Q5VXH5 474 aa16.46■□□□□ 0.23
PHRF1-205ENST00000533464 ADAMTS19Q8TE59 1207 aa16.46■□□□□ 0.23
PHRF1-205ENST00000533464 TMEM121BQ9BXQ6 578 aaPredicted RBP16.46■□□□□ 0.23
PHRF1-205ENST00000533464 UPK1BO75841 260 aa16.46■□□□□ 0.22
PHRF1-205ENST00000533464 UGT2B7P16662 529 aa16.46■□□□□ 0.22
PHRF1-205ENST00000533464 SFTPDP35247 375 aa16.46■□□□□ 0.22
PHRF1-205ENST00000533464 HSD11B2P80365 405 aa16.46■□□□□ 0.22
PHRF1-205ENST00000533464 DLX2Q07687 328 aaPredicted RBP16.46■□□□□ 0.22
PHRF1-205ENST00000533464 C18orf63Q68DL7 685 aa16.46■□□□□ 0.22
PHRF1-205ENST00000533464 RAB12Q6IQ22 244 aa16.46■□□□□ 0.22
PHRF1-205ENST00000533464 ASB15Q8WXK1 588 aa16.46■□□□□ 0.22
PHRF1-205ENST00000533464 TBC1D20Q96BZ9 403 aa16.46■□□□□ 0.22
PHRF1-205ENST00000533464 SLC7A11Q9UPY5 501 aa16.46■□□□□ 0.22
PHRF1-205ENST00000533464 WDR37Q9Y2I8 494 aa16.46■□□□□ 0.22
PHRF1-205ENST00000533464 TEX13CA0A0J9YWL9 993 aa16.45■□□□□ 0.22
PHRF1-205ENST00000533464 AGAP5A6NIR3 686 aa16.45■□□□□ 0.22
PHRF1-205ENST00000533464 RAD1O60671 282 aa16.45■□□□□ 0.22
PHRF1-205ENST00000533464 BCL7AQ4VC05 210 aa16.45■□□□□ 0.22
PHRF1-205ENST00000533464 LMF1Q96S06 567 aa16.45■□□□□ 0.22
PHRF1-205ENST00000533464 HPF1Q9NWY4 346 aa16.45■□□□□ 0.22
PHRF1-205ENST00000533464 IL7P13232 177 aa16.45■□□□□ 0.22
PHRF1-205ENST00000533464 GPX2P18283 190 aa16.45■□□□□ 0.22
PHRF1-205ENST00000533464 DRD5P21918 477 aa16.45■□□□□ 0.22
PHRF1-205ENST00000533464 HOXA9P31269 272 aa16.45■□□□□ 0.22
PHRF1-205ENST00000533464 UGT2B10P36537 528 aa16.45■□□□□ 0.22
PHRF1-205ENST00000533464 YPEL5P62699 121 aa16.45■□□□□ 0.22
PHRF1-205ENST00000533464 NKX3-2P78367 333 aa16.45■□□□□ 0.22
PHRF1-205ENST00000533464 MRPL2Q5T653 305 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms