RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 GPC1P35052 558 aa10.31□□□□□ -0.76
TRAPPC4-213ENST00000533149 OPRM1P35372 400 aa10.31□□□□□ -0.76
TRAPPC4-213ENST00000533149 GSK3BP49841 420 aa10.31□□□□□ -0.76
TRAPPC4-213ENST00000533149 CDK9P50750 372 aaKnown RBP10.31□□□□□ -0.76
TRAPPC4-213ENST00000533149 BTG2P78543 158 aa10.31□□□□□ -0.76
TRAPPC4-213ENST00000533149 LIPEQ05469 1076 aa10.31□□□□□ -0.76
TRAPPC4-213ENST00000533149 HSPB3Q12988 150 aa10.31□□□□□ -0.76
TRAPPC4-213ENST00000533149 GAB1Q13480 694 aa10.31□□□□□ -0.76
TRAPPC4-213ENST00000533149 SF3B4Q15427 424 aaKnown RBP eCLIP10.31□□□□□ -0.76
TRAPPC4-213ENST00000533149 RTL4Q6ZR62 310 aa10.31□□□□□ -0.76
TRAPPC4-213ENST00000533149 HIPK1Q86Z02 1210 aa10.31□□□□□ -0.76
TRAPPC4-213ENST00000533149 ZNF595Q8IYB9 648 aa10.31□□□□□ -0.76
TRAPPC4-213ENST00000533149 TRIML2Q8N7C3 387 aa10.31□□□□□ -0.76
TRAPPC4-213ENST00000533149 GOLM1Q8NBJ4 401 aa10.31□□□□□ -0.76
TRAPPC4-213ENST00000533149 FAM156AQ8NDB6 213 aa10.31□□□□□ -0.76
TRAPPC4-213ENST00000533149 FAM13CQ8NE31 585 aa10.31□□□□□ -0.76
TRAPPC4-213ENST00000533149 ZFP90Q8TF47 636 aa10.31□□□□□ -0.76
TRAPPC4-213ENST00000533149 HSPBAP1Q96EW2 488 aa10.31□□□□□ -0.76
TRAPPC4-213ENST00000533149 SGCZQ96LD1 299 aa10.31□□□□□ -0.76
TRAPPC4-213ENST00000533149 ZNF583Q96ND8 569 aa10.31□□□□□ -0.76
TRAPPC4-213ENST00000533149 ECSITQ9BQ95 431 aa10.31□□□□□ -0.76
TRAPPC4-213ENST00000533149 GSX2Q9BZM3 304 aa10.31□□□□□ -0.76
TRAPPC4-213ENST00000533149 IKZF5Q9H5V7 419 aa10.31□□□□□ -0.76
TRAPPC4-213ENST00000533149 PIF1Q9H611 641 aa10.31□□□□□ -0.76
TRAPPC4-213ENST00000533149 TPT1P8Q9HAU6 139 aa10.31□□□□□ -0.76
TRAPPC4-213ENST00000533149 PRTFDC1Q9NRG1 225 aa10.31□□□□□ -0.76
TRAPPC4-213ENST00000533149 SACM1LQ9NTJ5 587 aa10.31□□□□□ -0.76
TRAPPC4-213ENST00000533149 MRPS33Q9Y291 106 aaKnown RBP10.31□□□□□ -0.76
TRAPPC4-213ENST00000533149 AP3M1Q9Y2T2 418 aa10.31□□□□□ -0.76
TRAPPC4-213ENST00000533149 SNX8Q9Y5X2 465 aa10.31□□□□□ -0.76
TRAPPC4-213ENST00000533149 ARID1AO14497 2285 aa10.3□□□□□ -0.76
TRAPPC4-213ENST00000533149 SCN3AQ9NY46 2000 aa10.3□□□□□ -0.76
TRAPPC4-213ENST00000533149 ARHGAP21Q5T5U3 1957 aa10.3□□□□□ -0.76
TRAPPC4-213ENST00000533149 IGKV3D-11A0A0A0MRZ8 115 aa10.3□□□□□ -0.76
TRAPPC4-213ENST00000533149 SH3D21A4FU49 640 aa10.3□□□□□ -0.76
TRAPPC4-213ENST00000533149 A8MUA0 341 aa10.3□□□□□ -0.76
TRAPPC4-213ENST00000533149 EEF1E1-BLOC1S5C9J1V9 151 aa10.3□□□□□ -0.76
TRAPPC4-213ENST00000533149 H0YHG0 523 aa10.3□□□□□ -0.76
TRAPPC4-213ENST00000533149 EEF1E1O43324 174 aaKnown RBP10.3□□□□□ -0.76
TRAPPC4-213ENST00000533149 OR6B1O95007 311 aa10.3□□□□□ -0.76
TRAPPC4-213ENST00000533149 P04436 131 aa10.3□□□□□ -0.76
TRAPPC4-213ENST00000533149 HSD17B1P14061 328 aa10.3□□□□□ -0.76
TRAPPC4-213ENST00000533149 CPMP14384 443 aa10.3□□□□□ -0.76
TRAPPC4-213ENST00000533149 TCN1P20061 433 aaPredicted RBP10.3□□□□□ -0.76
TRAPPC4-213ENST00000533149 ENDOUP21128 410 aaKnown RBP10.3□□□□□ -0.76
TRAPPC4-213ENST00000533149 MAOAP21397 527 aa10.3□□□□□ -0.76
TRAPPC4-213ENST00000533149 PPIBP23284 216 aaKnown RBP10.3□□□□□ -0.76
TRAPPC4-213ENST00000533149 PPP2R1BP30154 601 aa10.3□□□□□ -0.76
TRAPPC4-213ENST00000533149 SOAT1P35610 550 aa10.3□□□□□ -0.76
TRAPPC4-213ENST00000533149 ZNF136P52737 540 aa10.3□□□□□ -0.76
TRAPPC4-213ENST00000533149 ELF3P78545 371 aaPredicted RBP10.3□□□□□ -0.76
TRAPPC4-213ENST00000533149 MS4A2Q01362 244 aa10.3□□□□□ -0.76
TRAPPC4-213ENST00000533149 FOXO1Q12778 655 aa10.3□□□□□ -0.76
TRAPPC4-213ENST00000533149 ACKR1Q16570 336 aa10.3□□□□□ -0.76
TRAPPC4-213ENST00000533149 SPDYE7PQ495Y7 208 aa10.3□□□□□ -0.76
TRAPPC4-213ENST00000533149 SPATS1Q496A3 300 aa10.3□□□□□ -0.76
TRAPPC4-213ENST00000533149 NET1Q7Z628 596 aaPredicted RBP10.3□□□□□ -0.76
TRAPPC4-213ENST00000533149 IFNEQ86WN2 208 aa10.3□□□□□ -0.76
TRAPPC4-213ENST00000533149 LRRC25Q8N386 305 aaPredicted RBP10.3□□□□□ -0.76
TRAPPC4-213ENST00000533149 OR10A6Q8NH74 314 aa10.3□□□□□ -0.76
TRAPPC4-213ENST00000533149 PSMA8Q8TAA3 256 aa10.3□□□□□ -0.76
TRAPPC4-213ENST00000533149 SLC35A5Q9BS91 424 aa10.3□□□□□ -0.76
TRAPPC4-213ENST00000533149 SIRT3Q9NTG7 399 aaPredicted RBP10.3□□□□□ -0.76
TRAPPC4-213ENST00000533149 JKAMPQ9P055 326 aa10.3□□□□□ -0.76
TRAPPC4-213ENST00000533149 MYOTQ9UBF9 498 aa10.3□□□□□ -0.76
TRAPPC4-213ENST00000533149 PPIEQ9UNP9 301 aaKnown RBP10.3□□□□□ -0.76
TRAPPC4-213ENST00000533149 POMPQ9Y244 141 aa10.3□□□□□ -0.76
TRAPPC4-213ENST00000533149 GMEB1Q9Y692 573 aa10.3□□□□□ -0.76
TRAPPC4-213ENST00000533149 KRT75O95678 551 aa10.29□□□□□ -0.76
TRAPPC4-213ENST00000533149 IL18BPO95998 194 aa10.29□□□□□ -0.76
TRAPPC4-213ENST00000533149 TP53P04637 393 aaPredicted RBP10.29□□□□□ -0.76
TRAPPC4-213ENST00000533149 SLC35E2P0CK97 266 aa10.29□□□□□ -0.76
TRAPPC4-213ENST00000533149 GPX2P18283 190 aa10.29□□□□□ -0.76
TRAPPC4-213ENST00000533149 CTSSP25774 331 aa10.29□□□□□ -0.76
TRAPPC4-213ENST00000533149 CHI3L1P36222 383 aaPredicted RBP10.29□□□□□ -0.76
TRAPPC4-213ENST00000533149 SOX3P41225 446 aa10.29□□□□□ -0.76
TRAPPC4-213ENST00000533149 CCT3P49368 545 aaKnown RBP10.29□□□□□ -0.76
TRAPPC4-213ENST00000533149 GZMMP51124 257 aa10.29□□□□□ -0.76
TRAPPC4-213ENST00000533149 HSD17B7P56937 341 aa10.29□□□□□ -0.76
TRAPPC4-213ENST00000533149 KRTAP1-1Q07627 177 aa10.29□□□□□ -0.76
TRAPPC4-213ENST00000533149 SLC13A2Q13183 592 aa10.29□□□□□ -0.76
TRAPPC4-213ENST00000533149 TRIM25Q14258 630 aaKnown RBP10.29□□□□□ -0.76
TRAPPC4-213ENST00000533149 KPNB1Q14974 876 aaKnown RBP10.29□□□□□ -0.76
TRAPPC4-213ENST00000533149 LTB4RQ15722 352 aa10.29□□□□□ -0.76
TRAPPC4-213ENST00000533149 ACSF3Q4G176 576 aaPredicted RBP10.29□□□□□ -0.76
TRAPPC4-213ENST00000533149 C1orf146Q5VVC0 180 aa10.29□□□□□ -0.76
TRAPPC4-213ENST00000533149 C20orf204Q6ZNR8 217 aa10.29□□□□□ -0.76
TRAPPC4-213ENST00000533149 C6orf120Q7Z4R8 191 aa10.29□□□□□ -0.76
TRAPPC4-213ENST00000533149 CALHM3Q86XJ0 350 aa10.29□□□□□ -0.76
TRAPPC4-213ENST00000533149 C10orf111Q8N326 155 aa10.29□□□□□ -0.76
TRAPPC4-213ENST00000533149 ADCY4Q8NFM4 1077 aa10.29□□□□□ -0.76
TRAPPC4-213ENST00000533149 OR9A2Q8NGT5 310 aa10.29□□□□□ -0.76
TRAPPC4-213ENST00000533149 OR5AK3PQ8NH89 298 aa10.29□□□□□ -0.76
TRAPPC4-213ENST00000533149 PNPT1Q8TCS8 783 aaKnown RBP10.29□□□□□ -0.76
TRAPPC4-213ENST00000533149 DOK4Q8TEW6 326 aa10.29□□□□□ -0.76
TRAPPC4-213ENST00000533149 WDR60Q8WVS4 1066 aa10.29□□□□□ -0.76
TRAPPC4-213ENST00000533149 KAT2AQ92830 837 aa10.29□□□□□ -0.76
TRAPPC4-213ENST00000533149 PPWD1Q96BP3 646 aaKnown RBP10.29□□□□□ -0.76
TRAPPC4-213ENST00000533149 CCDC124Q96CT7 223 aaKnown RBP10.29□□□□□ -0.76
TRAPPC4-213ENST00000533149 ELP4Q96EB1 424 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 124.1 ms