RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 TRBV4-1A0A0J9YWV2 114 aa17.06■□□□□ 0.32
SMPD1-208ENST00000533123 GXYLT2A0PJZ3 443 aa17.06■□□□□ 0.32
SMPD1-208ENST00000533123 MASP2O00187 686 aa17.06■□□□□ 0.32
SMPD1-208ENST00000533123 BCKDKO14874 412 aa17.06■□□□□ 0.32
SMPD1-208ENST00000533123 FRS3O43559 492 aa17.06■□□□□ 0.32
SMPD1-208ENST00000533123 NKX2-2O95096 273 aa17.06■□□□□ 0.32
SMPD1-208ENST00000533123 LGI1O95970 557 aa17.06■□□□□ 0.32
SMPD1-208ENST00000533123 AGR2O95994 175 aa17.06■□□□□ 0.32
SMPD1-208ENST00000533123 ITGAMP11215 1152 aa17.06■□□□□ 0.32
SMPD1-208ENST00000533123 CLK3P49761 638 aaKnown RBP17.06■□□□□ 0.32
SMPD1-208ENST00000533123 PIN1Q13526 163 aaPredicted RBP17.06■□□□□ 0.32
SMPD1-208ENST00000533123 VASH2Q86V25 355 aa17.06■□□□□ 0.32
SMPD1-208ENST00000533123 C8orf59Q8N0T1 100 aaPredicted RBP17.06■□□□□ 0.32
SMPD1-208ENST00000533123 TSPAN14Q8NG11 270 aa17.06■□□□□ 0.32
SMPD1-208ENST00000533123 KIAA1143Q96AT1 154 aaPredicted RBP17.06■□□□□ 0.32
SMPD1-208ENST00000533123 ALPK1Q96QP1 1244 aa17.06■□□□□ 0.32
SMPD1-208ENST00000533123 STACQ99469 402 aa17.06■□□□□ 0.32
SMPD1-208ENST00000533123 SDF2Q99470 211 aa17.06■□□□□ 0.32
SMPD1-208ENST00000533123 NIPSNAP1Q9BPW8 284 aa17.06■□□□□ 0.32
SMPD1-208ENST00000533123 PINK1Q9BXM7 581 aa17.06■□□□□ 0.32
SMPD1-208ENST00000533123 SEMA4CQ9C0C4 833 aa17.06■□□□□ 0.32
SMPD1-208ENST00000533123 CFL2Q9Y281 166 aa17.06■□□□□ 0.32
SMPD1-208ENST00000533123 WDR45Q9Y484 360 aa17.06■□□□□ 0.32
SMPD1-208ENST00000533123 LAMA5O15230 3695 aa17.06■□□□□ 0.32
SMPD1-208ENST00000533123 C2orf92A0A1B0GVN3 265 aa17.05■□□□□ 0.32
SMPD1-208ENST00000533123 CLDN24A6NM45 220 aa17.05■□□□□ 0.32
SMPD1-208ENST00000533123 SLC16A6O15403 523 aa17.05■□□□□ 0.32
SMPD1-208ENST00000533123 LIFP15018 202 aa17.05■□□□□ 0.32
SMPD1-208ENST00000533123 HMGA2P52926 109 aa17.05■□□□□ 0.32
SMPD1-208ENST00000533123 TPD52P55327 224 aaPredicted RBP17.05■□□□□ 0.32
SMPD1-208ENST00000533123 EBPQ15125 230 aaKnown RBP17.05■□□□□ 0.32
SMPD1-208ENST00000533123 NPTX1Q15818 432 aa17.05■□□□□ 0.32
SMPD1-208ENST00000533123 BTBD16Q32M84 506 aa17.05■□□□□ 0.32
SMPD1-208ENST00000533123 DCST2Q5T1A1 773 aa17.05■□□□□ 0.32
SMPD1-208ENST00000533123 VMP1Q96GC9 406 aa17.05■□□□□ 0.32
SMPD1-208ENST00000533123 IMMP1LQ96LU5 166 aa17.05■□□□□ 0.32
SMPD1-208ENST00000533123 MRPS26Q9BYN8 205 aaKnown RBP17.05■□□□□ 0.32
SMPD1-208ENST00000533123 GRIP2Q9C0E4 1043 aa17.05■□□□□ 0.32
SMPD1-208ENST00000533123 LIN28AQ9H9Z2 209 aaKnown RBP17.05■□□□□ 0.32
SMPD1-208ENST00000533123 CTPS2Q9NRF8 586 aa17.05■□□□□ 0.32
SMPD1-208ENST00000533123 SLC9A8Q9Y2E8 581 aa17.05■□□□□ 0.32
SMPD1-208ENST00000533123 NSG1A0A0A6YYJ2 146 aa17.05■□□□□ 0.32
SMPD1-208ENST00000533123 TRBV11-1A0A0K0K1C0 115 aa17.05■□□□□ 0.32
SMPD1-208ENST00000533123 CDC14CA4D256 554 aa17.05■□□□□ 0.32
SMPD1-208ENST00000533123 CELA2AP08217 269 aa17.05■□□□□ 0.32
SMPD1-208ENST00000533123 POU2F1P14859 743 aa17.05■□□□□ 0.32
SMPD1-208ENST00000533123 IL7RP16871 459 aa17.05■□□□□ 0.32
SMPD1-208ENST00000533123 RNF4P78317 190 aa17.05■□□□□ 0.32
SMPD1-208ENST00000533123 SRSF6Q13247 344 aaKnown RBP17.05■□□□□ 0.32
SMPD1-208ENST00000533123 RAPSNQ13702 412 aa17.05■□□□□ 0.32
SMPD1-208ENST00000533123 CTU2Q2VPK5 515 aaKnown RBP17.05■□□□□ 0.32
SMPD1-208ENST00000533123 FGD3Q5JSP0 725 aa17.05■□□□□ 0.32
SMPD1-208ENST00000533123 COLEC12Q5KU26 742 aa17.05■□□□□ 0.32
SMPD1-208ENST00000533123 FIGNL1Q6PIW4 674 aa17.05■□□□□ 0.32
SMPD1-208ENST00000533123 HSDL2Q6YN16 418 aa17.05■□□□□ 0.32
SMPD1-208ENST00000533123 NDUFAF7Q7L592 441 aa17.05■□□□□ 0.32
SMPD1-208ENST00000533123 SLC29A4Q7RTT9 530 aa17.05■□□□□ 0.32
SMPD1-208ENST00000533123 THAP5Q7Z6K1 395 aa17.05■□□□□ 0.32
SMPD1-208ENST00000533123 TAGAPQ8N103 731 aa17.05■□□□□ 0.32
SMPD1-208ENST00000533123 ZSCAN1Q8NBB4 408 aa17.05■□□□□ 0.32
SMPD1-208ENST00000533123 OR52P1PQ8NH57 321 aa17.05■□□□□ 0.32
SMPD1-208ENST00000533123 THAP3Q8WTV1 239 aaPredicted RBP17.05■□□□□ 0.32
SMPD1-208ENST00000533123 ADIPOR1Q96A54 375 aa17.05■□□□□ 0.32
SMPD1-208ENST00000533123 PRR14Q9BWN1 585 aa17.05■□□□□ 0.32
SMPD1-208ENST00000533123 FAM117AQ9C073 453 aa17.05■□□□□ 0.32
SMPD1-208ENST00000533123 ING2Q9H160 280 aa17.05■□□□□ 0.32
SMPD1-208ENST00000533123 ZNF160Q9HCG1 818 aa17.05■□□□□ 0.32
SMPD1-208ENST00000533123 A4GNTQ9UNA3 340 aa17.05■□□□□ 0.32
SMPD1-208ENST00000533123 CCNB2O95067 398 aa17.04■□□□□ 0.32
SMPD1-208ENST00000533123 RFX3P48380 749 aa17.04■□□□□ 0.32
SMPD1-208ENST00000533123 RNF144AP50876 292 aaPredicted RBP17.04■□□□□ 0.32
SMPD1-208ENST00000533123 SEC23BQ15437 767 aa17.04■□□□□ 0.32
SMPD1-208ENST00000533123 GPR68Q15743 365 aa17.04■□□□□ 0.32
SMPD1-208ENST00000533123 ZNF691Q5VV52 312 aa17.04■□□□□ 0.32
SMPD1-208ENST00000533123 CLIP4Q8N3C7 705 aa17.04■□□□□ 0.32
SMPD1-208ENST00000533123 WWTR1Q9GZV5 400 aa17.04■□□□□ 0.32
SMPD1-208ENST00000533123 ZNF350Q9GZX5 532 aa17.04■□□□□ 0.32
SMPD1-208ENST00000533123 NXF5Q9H1B4 397 aaKnown RBP17.04■□□□□ 0.32
SMPD1-208ENST00000533123 P4HTMQ9NXG6 502 aa17.04■□□□□ 0.32
SMPD1-208ENST00000533123 ACAD8Q9UKU7 415 aa17.04■□□□□ 0.32
SMPD1-208ENST00000533123 NPIPA5A0A0B4J1W7 369 aa17.04■□□□□ 0.32
SMPD1-208ENST00000533123 OR6C76A6NM76 312 aa17.04■□□□□ 0.32
SMPD1-208ENST00000533123 NPIPA7E9PJI5 369 aa17.04■□□□□ 0.32
SMPD1-208ENST00000533123 TPST2O60704 377 aa17.04■□□□□ 0.32
SMPD1-208ENST00000533123 NPIPA8P0DM63 369 aa17.04■□□□□ 0.32
SMPD1-208ENST00000533123 PPICP45877 212 aa17.04■□□□□ 0.32
SMPD1-208ENST00000533123 ID4P47928 161 aa17.04■□□□□ 0.32
SMPD1-208ENST00000533123 KCTD21Q4G0X4 260 aa17.04■□□□□ 0.32
SMPD1-208ENST00000533123 HLA-DQA1Q5Y7H0 255 aa17.04■□□□□ 0.32
SMPD1-208ENST00000533123 Q6ZPB1 254 aaPredicted RBP17.04■□□□□ 0.32
SMPD1-208ENST00000533123 MRGPREQ86SM8 312 aa17.04■□□□□ 0.32
SMPD1-208ENST00000533123 NACC2Q96BF6 587 aa17.04■□□□□ 0.32
SMPD1-208ENST00000533123 LMF1Q96S06 567 aa17.04■□□□□ 0.32
SMPD1-208ENST00000533123 Q9N2J8 555 aa17.04■□□□□ 0.32
SMPD1-208ENST00000533123 FBXL4Q9UKA2 621 aa17.04■□□□□ 0.32
SMPD1-208ENST00000533123 OR10H1Q9Y4A9 318 aa17.04■□□□□ 0.32
SMPD1-208ENST00000533123 LOC400499M0QZD8 3231 aa17.03■□□□□ 0.32
SMPD1-208ENST00000533123 A0A1W2PQ72 361 aa17.03■□□□□ 0.32
SMPD1-208ENST00000533123 H1F0P07305 194 aaKnown RBP17.03■□□□□ 0.32
SMPD1-208ENST00000533123 ELAVL4P26378 380 aaKnown RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms