RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 C3orf49Q96BT1 292 aa8.21□□□□□ -1.1
NEDD8-206ENST00000531430 CHMP6Q96FZ7 201 aa8.21□□□□□ -1.1
NEDD8-206ENST00000531430 KLHL15Q96M94 604 aa8.21□□□□□ -1.1
NEDD8-206ENST00000531430 GLIPR2Q9H4G4 154 aa8.21□□□□□ -1.1
NEDD8-206ENST00000531430 GRHL1Q9NZI5 618 aa8.21□□□□□ -1.1
NEDD8-206ENST00000531430 C19orf53Q9UNZ5 99 aaPredicted RBP8.21□□□□□ -1.1
NEDD8-206ENST00000531430 TIMM22Q9Y584 194 aa8.21□□□□□ -1.1
NEDD8-206ENST00000531430 IGHV3-15A0A0B4J1V0 119 aa8.2□□□□□ -1.1
NEDD8-206ENST00000531430 A0A1W2PRB8 838 aa8.2□□□□□ -1.1
NEDD8-206ENST00000531430 MYO1GB0I1T2 1018 aa8.2□□□□□ -1.1
NEDD8-206ENST00000531430 POC1B-GALNT4F8VUJ3 575 aa8.2□□□□□ -1.1
NEDD8-206ENST00000531430 ADAMDEC1O15204 470 aa8.2□□□□□ -1.1
NEDD8-206ENST00000531430 GCM2O75603 506 aaPredicted RBP8.2□□□□□ -1.1
NEDD8-206ENST00000531430 IGKV1D-16P01601 117 aa8.2□□□□□ -1.1
NEDD8-206ENST00000531430 YES1P07947 543 aa8.2□□□□□ -1.1
NEDD8-206ENST00000531430 INHBAP08476 426 aa8.2□□□□□ -1.1
NEDD8-206ENST00000531430 NTSP30990 170 aa8.2□□□□□ -1.1
NEDD8-206ENST00000531430 TIA1P31483 386 aaKnown RBP eCLIP8.2□□□□□ -1.1
NEDD8-206ENST00000531430 HTR6P50406 440 aa8.2□□□□□ -1.1
NEDD8-206ENST00000531430 DSCR9P59020 149 aa8.2□□□□□ -1.1
NEDD8-206ENST00000531430 IRX1P78414 480 aaPredicted RBP8.2□□□□□ -1.1
NEDD8-206ENST00000531430 CAV1Q03135 178 aa8.2□□□□□ -1.1
NEDD8-206ENST00000531430 SLC18A2Q05940 514 aa8.2□□□□□ -1.1
NEDD8-206ENST00000531430 RUNX1T1Q06455 604 aa8.2□□□□□ -1.1
NEDD8-206ENST00000531430 PPA1Q15181 289 aa8.2□□□□□ -1.1
NEDD8-206ENST00000531430 CARTPTQ16568 116 aa8.2□□□□□ -1.1
NEDD8-206ENST00000531430 IMPG1Q17R60 797 aa8.2□□□□□ -1.1
NEDD8-206ENST00000531430 TMEM44Q2T9K0 475 aa8.2□□□□□ -1.1
NEDD8-206ENST00000531430 TMEM176BQ3YBM2 270 aaPredicted RBP8.2□□□□□ -1.1
NEDD8-206ENST00000531430 SPIN4Q56A73 249 aa8.2□□□□□ -1.1
NEDD8-206ENST00000531430 SLC22A25Q6T423 547 aa8.2□□□□□ -1.1
NEDD8-206ENST00000531430 TFAP2EQ6VUC0 442 aa8.2□□□□□ -1.1
NEDD8-206ENST00000531430 GPRIN3Q6ZVF9 776 aa8.2□□□□□ -1.1
NEDD8-206ENST00000531430 FCRLAQ7L513 359 aa8.2□□□□□ -1.1
NEDD8-206ENST00000531430 GABRG1Q8N1C3 465 aa8.2□□□□□ -1.1
NEDD8-206ENST00000531430 FBXL14Q8N1E6 418 aa8.2□□□□□ -1.1
NEDD8-206ENST00000531430 GTPBP8Q8N3Z3 284 aaPredicted RBP8.2□□□□□ -1.1
NEDD8-206ENST00000531430 ZNF525Q8N782 197 aa8.2□□□□□ -1.1
NEDD8-206ENST00000531430 ZNF483Q8TF39 744 aaPredicted RBP8.2□□□□□ -1.1
NEDD8-206ENST00000531430 FAM168AQ92567 244 aa8.2□□□□□ -1.1
NEDD8-206ENST00000531430 ZBTB8AQ96BR9 441 aa8.2□□□□□ -1.1
NEDD8-206ENST00000531430 ELP4Q96EB1 424 aa8.2□□□□□ -1.1
NEDD8-206ENST00000531430 ADGRG7Q96K78 797 aa8.2□□□□□ -1.1
NEDD8-206ENST00000531430 C1QTNF6Q9BXI9 259 aa8.2□□□□□ -1.1
NEDD8-206ENST00000531430 TRIM2Q9C040 744 aa8.2□□□□□ -1.1
NEDD8-206ENST00000531430 MED17Q9NVC6 651 aa8.2□□□□□ -1.1
NEDD8-206ENST00000531430 LPAR3Q9UBY5 353 aa8.2□□□□□ -1.1
NEDD8-206ENST00000531430 PRSS50Q9UI38 385 aa8.2□□□□□ -1.1
NEDD8-206ENST00000531430 CUBNO60494 3623 aa8.2□□□□□ -1.1
NEDD8-206ENST00000531430 FREM1Q5H8C1 2179 aa8.2□□□□□ -1.1
NEDD8-206ENST00000531430 A0A087WV62 115 aa8.19□□□□□ -1.1
NEDD8-206ENST00000531430 LOC100289279A0A1B0GTE1 492 aa8.19□□□□□ -1.1
NEDD8-206ENST00000531430 A0A1W2PR80 420 aa8.19□□□□□ -1.1
NEDD8-206ENST00000531430 CIB4A0PJX0 185 aa8.19□□□□□ -1.1
NEDD8-206ENST00000531430 SCDO00767 359 aa8.19□□□□□ -1.1
NEDD8-206ENST00000531430 KIAA0513O60268 411 aa8.19□□□□□ -1.1
NEDD8-206ENST00000531430 OXSR1O95747 527 aaPredicted RBP8.19□□□□□ -1.1
NEDD8-206ENST00000531430 RPS17P08708 135 aaKnown RBP8.19□□□□□ -1.1
NEDD8-206ENST00000531430 PRPS2P11908 318 aa8.19□□□□□ -1.1
NEDD8-206ENST00000531430 HSD3B1P14060 373 aa8.19□□□□□ -1.1
NEDD8-206ENST00000531430 ZNF16P17020 682 aaPredicted RBP8.19□□□□□ -1.1
NEDD8-206ENST00000531430 ZNF17P17021 662 aa8.19□□□□□ -1.1
NEDD8-206ENST00000531430 TAC1P20366 129 aa8.19□□□□□ -1.1
NEDD8-206ENST00000531430 DDCP20711 480 aa8.19□□□□□ -1.1
NEDD8-206ENST00000531430 USF1P22415 310 aaPredicted RBP8.19□□□□□ -1.1
NEDD8-206ENST00000531430 HSD3B2P26439 372 aa8.19□□□□□ -1.1
NEDD8-206ENST00000531430 SHC1P29353 583 aa8.19□□□□□ -1.1
NEDD8-206ENST00000531430 TTKP33981 857 aa8.19□□□□□ -1.1
NEDD8-206ENST00000531430 PHBP35232 272 aa8.19□□□□□ -1.1
NEDD8-206ENST00000531430 ZNF83P51522 516 aa8.19□□□□□ -1.1
NEDD8-206ENST00000531430 LSM11P83369 360 aaKnown RBP eCLIP8.19□□□□□ -1.1
NEDD8-206ENST00000531430 GUCY2DQ02846 1103 aa8.19□□□□□ -1.1
NEDD8-206ENST00000531430 LOXL1Q08397 574 aaPredicted RBP8.19□□□□□ -1.1
NEDD8-206ENST00000531430 HSPB3Q12988 150 aa8.19□□□□□ -1.1
NEDD8-206ENST00000531430 GGTLC2Q14390 218 aa8.19□□□□□ -1.1
NEDD8-206ENST00000531430 SLC29A2Q14542 456 aa8.19□□□□□ -1.1
NEDD8-206ENST00000531430 P2RY6Q15077 328 aa8.19□□□□□ -1.1
NEDD8-206ENST00000531430 RASA2Q15283 850 aa8.19□□□□□ -1.1
NEDD8-206ENST00000531430 RNPS1Q15287 305 aaKnown RBP8.19□□□□□ -1.1
NEDD8-206ENST00000531430 TSNAXIP1Q2TAA8 658 aa8.19□□□□□ -1.1
NEDD8-206ENST00000531430 UNC50Q53HI1 259 aa8.19□□□□□ -1.1
NEDD8-206ENST00000531430 LIPNQ5VXI9 398 aa8.19□□□□□ -1.1
NEDD8-206ENST00000531430 DNM1P46Q6ZS02 220 aa8.19□□□□□ -1.1
NEDD8-206ENST00000531430 ZNF551Q7Z340 670 aaPredicted RBP8.19□□□□□ -1.1
NEDD8-206ENST00000531430 TRABD2AQ86V40 505 aa8.19□□□□□ -1.1
NEDD8-206ENST00000531430 ZNF100Q8IYN0 542 aa8.19□□□□□ -1.1
NEDD8-206ENST00000531430 DEPDC4Q8N2C3 294 aa8.19□□□□□ -1.1
NEDD8-206ENST00000531430 UBE2J2Q8N2K1 259 aa8.19□□□□□ -1.1
NEDD8-206ENST00000531430 SPATA4Q8NEY3 305 aa8.19□□□□□ -1.1
NEDD8-206ENST00000531430 OR10H5Q8NGA6 315 aa8.19□□□□□ -1.1
NEDD8-206ENST00000531430 B4GALNT2Q8NHY0 566 aa8.19□□□□□ -1.1
NEDD8-206ENST00000531430 RFWD2Q8NHY2 731 aa8.19□□□□□ -1.1
NEDD8-206ENST00000531430 PHOSPHO1Q8TCT1 267 aa8.19□□□□□ -1.1
NEDD8-206ENST00000531430 OTUB1Q96FW1 271 aaPredicted RBP8.19□□□□□ -1.1
NEDD8-206ENST00000531430 RADILQ96JH8 1075 aa8.19□□□□□ -1.1
NEDD8-206ENST00000531430 MRPL57Q9BQC6 102 aaKnown RBP8.19□□□□□ -1.1
NEDD8-206ENST00000531430 LMF2Q9BU23 707 aaKnown RBP8.19□□□□□ -1.1
NEDD8-206ENST00000531430 SRXN1Q9BYN0 137 aa8.19□□□□□ -1.1
NEDD8-206ENST00000531430 POTEKPQ9BYX7 375 aa8.19□□□□□ -1.1
NEDD8-206ENST00000531430 ACPTQ9BZG2 426 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms