RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 MRPS22P82650 360 aaKnown RBP7.21□□□□□ -1.26
CD44-232ENST00000531118 MORF4L2Q15014 288 aa7.21□□□□□ -1.26
CD44-232ENST00000531118 RNPS1Q15287 305 aaKnown RBP7.21□□□□□ -1.26
CD44-232ENST00000531118 ZNF628Q5EBL2 1059 aa7.21□□□□□ -1.26
CD44-232ENST00000531118 CDKL4Q5MAI5 379 aa7.21□□□□□ -1.26
CD44-232ENST00000531118 TEDDM1Q5T9Z0 273 aa7.21□□□□□ -1.26
CD44-232ENST00000531118 HBMQ6B0K9 141 aa7.21□□□□□ -1.26
CD44-232ENST00000531118 SLC48A1Q6P1K1 146 aa7.21□□□□□ -1.26
CD44-232ENST00000531118 SHQ1Q6PI26 577 aaKnown RBP7.21□□□□□ -1.26
CD44-232ENST00000531118 RAD9BQ6WBX8 426 aa7.21□□□□□ -1.26
CD44-232ENST00000531118 ESPNLQ6ZVH7 1005 aa7.21□□□□□ -1.26
CD44-232ENST00000531118 GLCCI1Q86VQ1 547 aa7.21□□□□□ -1.26
CD44-232ENST00000531118 MYLK4Q86YV6 388 aaPredicted RBP7.21□□□□□ -1.26
CD44-232ENST00000531118 WDR75Q8IWA0 830 aaKnown RBP7.21□□□□□ -1.26
CD44-232ENST00000531118 SVOPLQ8N434 492 aa7.21□□□□□ -1.26
CD44-232ENST00000531118 ANKS4BQ8N8V4 417 aa7.21□□□□□ -1.26
CD44-232ENST00000531118 UBTD2Q8WUN7 234 aa7.21□□□□□ -1.26
CD44-232ENST00000531118 KLHL29Q96CT2 875 aa7.21□□□□□ -1.26
CD44-232ENST00000531118 SNX18Q96RF0 628 aa7.21□□□□□ -1.26
CD44-232ENST00000531118 NPAS1Q99742 590 aa7.21□□□□□ -1.26
CD44-232ENST00000531118 INPP5KQ9BT40 448 aa7.21□□□□□ -1.26
CD44-232ENST00000531118 SRXN1Q9BYN0 137 aa7.21□□□□□ -1.26
CD44-232ENST00000531118 DERL2Q9GZP9 239 aa7.21□□□□□ -1.26
CD44-232ENST00000531118 TMEM185BQ9H7F4 350 aa7.21□□□□□ -1.26
CD44-232ENST00000531118 PLAC1Q9HBJ0 212 aa7.21□□□□□ -1.26
CD44-232ENST00000531118 CD274Q9NZQ7 290 aa7.21□□□□□ -1.26
CD44-232ENST00000531118 STOML1Q9UBI4 398 aa7.21□□□□□ -1.26
CD44-232ENST00000531118 PRSS50Q9UI38 385 aa7.21□□□□□ -1.26
CD44-232ENST00000531118 TSC22D4Q9Y3Q8 395 aa7.21□□□□□ -1.26
CD44-232ENST00000531118 EPPK1P58107 5090 aaKnown RBP7.2□□□□□ -1.26
CD44-232ENST00000531118 IGLV3-32A0A0A0MS00 114 aa7.2□□□□□ -1.26
CD44-232ENST00000531118 OR5H1A6NKK0 313 aa7.2□□□□□ -1.26
CD44-232ENST00000531118 GMFGO60234 142 aa7.2□□□□□ -1.26
CD44-232ENST00000531118 RAD51DO75771 328 aa7.2□□□□□ -1.26
CD44-232ENST00000531118 SEMA3DO95025 777 aa7.2□□□□□ -1.26
CD44-232ENST00000531118 WISP3O95389 354 aaPredicted RBP7.2□□□□□ -1.26
CD44-232ENST00000531118 OPN1LWP04000 364 aa7.2□□□□□ -1.26
CD44-232ENST00000531118 S100BP04271 92 aaPredicted RBP7.2□□□□□ -1.26
CD44-232ENST00000531118 PABPC4LP0CB38 370 aaKnown RBP7.2□□□□□ -1.26
CD44-232ENST00000531118 GGT1P19440 569 aa7.2□□□□□ -1.26
CD44-232ENST00000531118 IGHV1-2P23083 117 aa7.2□□□□□ -1.26
CD44-232ENST00000531118 EDNRAP25101 427 aa7.2□□□□□ -1.26
CD44-232ENST00000531118 OR3A2P47893 321 aa7.2□□□□□ -1.26
CD44-232ENST00000531118 SNRPD2P62316 118 aaKnown RBP7.2□□□□□ -1.26
CD44-232ENST00000531118 ID3Q02535 119 aa7.2□□□□□ -1.26
CD44-232ENST00000531118 ZNF155Q12901 538 aaPredicted RBP7.2□□□□□ -1.26
CD44-232ENST00000531118 FOXL1Q12952 345 aa7.2□□□□□ -1.26
CD44-232ENST00000531118 CUL3Q13618 768 aa7.2□□□□□ -1.26
CD44-232ENST00000531118 CCNIQ14094 377 aa7.2□□□□□ -1.26
CD44-232ENST00000531118 OR4D1Q15615 310 aa7.2□□□□□ -1.26
CD44-232ENST00000531118 PDSS1Q5T2R2 415 aa7.2□□□□□ -1.26
CD44-232ENST00000531118 GTF2IRD2BQ6EKJ0 949 aa7.2□□□□□ -1.26
CD44-232ENST00000531118 KLHL17Q6TDP4 642 aa7.2□□□□□ -1.26
CD44-232ENST00000531118 GTF2IRD2Q86UP8 949 aa7.2□□□□□ -1.26
CD44-232ENST00000531118 ZC3HC1Q86WB0 502 aaKnown RBP7.2□□□□□ -1.26
CD44-232ENST00000531118 GTPBP8Q8N3Z3 284 aaPredicted RBP7.2□□□□□ -1.26
CD44-232ENST00000531118 SPATA6LQ8N4H0 392 aa7.2□□□□□ -1.26
CD44-232ENST00000531118 NAT8LQ8N9F0 302 aa7.2□□□□□ -1.26
CD44-232ENST00000531118 ZNF540Q8NDQ6 660 aa7.2□□□□□ -1.26
CD44-232ENST00000531118 OR4N2Q8NGD1 307 aa7.2□□□□□ -1.26
CD44-232ENST00000531118 ZNF675Q8TD23 568 aa7.2□□□□□ -1.26
CD44-232ENST00000531118 CPNE4Q96A23 557 aaPredicted RBP7.2□□□□□ -1.26
CD44-232ENST00000531118 FBXO17Q96EF6 278 aa7.2□□□□□ -1.26
CD44-232ENST00000531118 KLHL15Q96M94 604 aa7.2□□□□□ -1.26
CD44-232ENST00000531118 PKP2Q99959 881 aa7.2□□□□□ -1.26
CD44-232ENST00000531118 ANKRA2Q9H9E1 313 aa7.2□□□□□ -1.26
CD44-232ENST00000531118 POPDC3Q9HBV1 291 aa7.2□□□□□ -1.26
CD44-232ENST00000531118 GP6Q9HCN6 339 aa7.2□□□□□ -1.26
CD44-232ENST00000531118 MYNNQ9NPC7 610 aa7.2□□□□□ -1.26
CD44-232ENST00000531118 ESM1Q9NQ30 184 aa7.2□□□□□ -1.26
CD44-232ENST00000531118 PPANQ9NQ55 473 aaKnown RBP7.2□□□□□ -1.26
CD44-232ENST00000531118 SDHAF3Q9NRP4 125 aa7.2□□□□□ -1.26
CD44-232ENST00000531118 FAM120CQ9NX05 1096 aaKnown RBP7.2□□□□□ -1.26
CD44-232ENST00000531118 CES1P1Q9UKY3 287 aa7.2□□□□□ -1.26
CD44-232ENST00000531118 USP22Q9UPT9 525 aa7.2□□□□□ -1.26
CD44-232ENST00000531118 TRAF6Q9Y4K3 522 aa7.2□□□□□ -1.26
CD44-232ENST00000531118 SPEF1Q9Y4P9 236 aa7.2□□□□□ -1.26
CD44-232ENST00000531118 PCDHA9Q9Y5H5 950 aa7.2□□□□□ -1.26
CD44-232ENST00000531118 PSAT1Q9Y617 370 aa7.2□□□□□ -1.26
CD44-232ENST00000531118 ATP23Q9Y6H3 246 aa7.2□□□□□ -1.26
CD44-232ENST00000531118 NPIPA5A0A0B4J1W7 369 aa7.19□□□□□ -1.26
CD44-232ENST00000531118 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.19□□□□□ -1.26
CD44-232ENST00000531118 C7orf72A4D263 438 aa7.19□□□□□ -1.26
CD44-232ENST00000531118 NPIPA7E9PJI5 369 aa7.19□□□□□ -1.26
CD44-232ENST00000531118 ATP6V1G2-DDX39BF2Z307 99 aa7.19□□□□□ -1.26
CD44-232ENST00000531118 K7EPI3 171 aa7.19□□□□□ -1.26
CD44-232ENST00000531118 M0R1B8 84 aa7.19□□□□□ -1.26
CD44-232ENST00000531118 GSC2O15499 205 aa7.19□□□□□ -1.26
CD44-232ENST00000531118 SNUPNO95149 360 aaKnown RBP7.19□□□□□ -1.26
CD44-232ENST00000531118 PGM3O95394 542 aa7.19□□□□□ -1.26
CD44-232ENST00000531118 STAMBPO95630 424 aa7.19□□□□□ -1.26
CD44-232ENST00000531118 FGGP02679 453 aa7.19□□□□□ -1.26
CD44-232ENST00000531118 CTAGE8P0CG41 777 aa7.19□□□□□ -1.26
CD44-232ENST00000531118 NPIPA8P0DM63 369 aa7.19□□□□□ -1.26
CD44-232ENST00000531118 CD1DP15813 335 aa7.19□□□□□ -1.26
CD44-232ENST00000531118 CSNK2A2P19784 350 aaPredicted RBP7.19□□□□□ -1.26
CD44-232ENST00000531118 PSMA4P25789 261 aaKnown RBP7.19□□□□□ -1.26
CD44-232ENST00000531118 PTX3P26022 381 aaPredicted RBP7.19□□□□□ -1.26
CD44-232ENST00000531118 ZFP36P26651 326 aaKnown RBP7.19□□□□□ -1.26
CD44-232ENST00000531118 GIFP27352 417 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms