RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 ROPN1LQ96C74 230 aa11.49□□□□□ -0.57
CCDC90B-216ENST00000529856 TTYH2Q9BSA4 534 aa11.49□□□□□ -0.57
CCDC90B-216ENST00000529856 TMEM120AQ9BXJ8 343 aa11.49□□□□□ -0.57
CCDC90B-216ENST00000529856 NMUR2Q9GZQ4 415 aa11.49□□□□□ -0.57
CCDC90B-216ENST00000529856 ZNF350Q9GZX5 532 aa11.49□□□□□ -0.57
CCDC90B-216ENST00000529856 PAIP1Q9H074 479 aaKnown RBP11.49□□□□□ -0.57
CCDC90B-216ENST00000529856 SAP130Q9H0E3 1048 aa11.49□□□□□ -0.57
CCDC90B-216ENST00000529856 TPT1P8Q9HAU6 139 aa11.49□□□□□ -0.57
CCDC90B-216ENST00000529856 POLE3Q9NRF9 147 aa11.49□□□□□ -0.57
CCDC90B-216ENST00000529856 PLEKHB1Q9UF11 243 aaPredicted RBP11.49□□□□□ -0.57
CCDC90B-216ENST00000529856 MKLN1Q9UL63 735 aa11.49□□□□□ -0.57
CCDC90B-216ENST00000529856 RPH3AQ9Y2J0 694 aaPredicted RBP11.49□□□□□ -0.57
CCDC90B-216ENST00000529856 DTNAQ9Y4J8 743 aa11.49□□□□□ -0.57
CCDC90B-216ENST00000529856 MED12Q93074 2177 aa11.49□□□□□ -0.57
CCDC90B-216ENST00000529856 UTP20O75691 2785 aaKnown RBP11.49□□□□□ -0.57
CCDC90B-216ENST00000529856 PTPN13Q12923 2485 aa11.48□□□□□ -0.57
CCDC90B-216ENST00000529856 A0A096LPI6 279 aa11.48□□□□□ -0.57
CCDC90B-216ENST00000529856 H3BNH8 94 aa11.48□□□□□ -0.57
CCDC90B-216ENST00000529856 GLI4P10075 376 aa11.48□□□□□ -0.57
CCDC90B-216ENST00000529856 GP1BBP13224 206 aa11.48□□□□□ -0.57
CCDC90B-216ENST00000529856 CAPN3P20807 821 aa11.48□□□□□ -0.57
CCDC90B-216ENST00000529856 TCEA1P23193 301 aaKnown RBP11.48□□□□□ -0.57
CCDC90B-216ENST00000529856 STARP49675 285 aa11.48□□□□□ -0.57
CCDC90B-216ENST00000529856 NUP107P57740 925 aa11.48□□□□□ -0.57
CCDC90B-216ENST00000529856 ART3Q13508 389 aa11.48□□□□□ -0.57
CCDC90B-216ENST00000529856 BCL2A1Q16548 175 aa11.48□□□□□ -0.57
CCDC90B-216ENST00000529856 ZNF630Q2M218 657 aaPredicted RBP11.48□□□□□ -0.57
CCDC90B-216ENST00000529856 GTDC1Q4AE62 458 aa11.48□□□□□ -0.57
CCDC90B-216ENST00000529856 TYW3Q6IPR3 259 aaKnown RBP11.48□□□□□ -0.57
CCDC90B-216ENST00000529856 CGB2Q6NT52 195 aa11.48□□□□□ -0.57
CCDC90B-216ENST00000529856 ARSKQ6UWY0 536 aa11.48□□□□□ -0.57
CCDC90B-216ENST00000529856 DNAJC14Q6Y2X3 702 aaPredicted RBP11.48□□□□□ -0.57
CCDC90B-216ENST00000529856 OLIG3Q7RTU3 272 aa11.48□□□□□ -0.57
CCDC90B-216ENST00000529856 MAMDC2Q7Z304 686 aaPredicted RBP11.48□□□□□ -0.57
CCDC90B-216ENST00000529856 B4GALNT2Q8NHY0 566 aa11.48□□□□□ -0.57
CCDC90B-216ENST00000529856 PNPT1Q8TCS8 783 aaKnown RBP11.48□□□□□ -0.57
CCDC90B-216ENST00000529856 PHOSPHO1Q8TCT1 267 aa11.48□□□□□ -0.57
CCDC90B-216ENST00000529856 RND1Q92730 232 aa11.48□□□□□ -0.57
CCDC90B-216ENST00000529856 SFXN2Q96NB2 322 aa11.48□□□□□ -0.57
CCDC90B-216ENST00000529856 KCNE5Q9UJ90 142 aa11.48□□□□□ -0.57
CCDC90B-216ENST00000529856 CAMK2AQ9UQM7 478 aa11.48□□□□□ -0.57
CCDC90B-216ENST00000529856 LIPT1Q9Y234 373 aa11.48□□□□□ -0.57
CCDC90B-216ENST00000529856 WDR45Q9Y484 360 aa11.48□□□□□ -0.57
CCDC90B-216ENST00000529856 PCDHB14Q9Y5E9 798 aa11.48□□□□□ -0.57
CCDC90B-216ENST00000529856 SPTBN1Q01082 2364 aaKnown RBP11.47□□□□□ -0.57
CCDC90B-216ENST00000529856 A0A087WZY1 265 aa11.47□□□□□ -0.57
CCDC90B-216ENST00000529856 A0A1W2PP18 115 aa11.47□□□□□ -0.57
CCDC90B-216ENST00000529856 LINC01387J3KSC0 135 aa11.47□□□□□ -0.57
CCDC90B-216ENST00000529856 OIP5O43482 229 aa11.47□□□□□ -0.57
CCDC90B-216ENST00000529856 GMFGO60234 142 aa11.47□□□□□ -0.57
CCDC90B-216ENST00000529856 KIAA0513O60268 411 aa11.47□□□□□ -0.57
CCDC90B-216ENST00000529856 UGT2B17O75795 530 aa11.47□□□□□ -0.57
CCDC90B-216ENST00000529856 EPPINO95925 133 aa11.47□□□□□ -0.57
CCDC90B-216ENST00000529856 HOXB9P17482 250 aaPredicted RBP11.47□□□□□ -0.57
CCDC90B-216ENST00000529856 ADH7P40394 386 aa11.47□□□□□ -0.57
CCDC90B-216ENST00000529856 LHX2P50458 406 aa11.47□□□□□ -0.57
CCDC90B-216ENST00000529856 ARFIP2P53365 341 aa11.47□□□□□ -0.57
CCDC90B-216ENST00000529856 ZNF117Q03924 483 aa11.47□□□□□ -0.57
CCDC90B-216ENST00000529856 CHRNEQ04844 493 aa11.47□□□□□ -0.57
CCDC90B-216ENST00000529856 SF3B4Q15427 424 aaKnown RBP eCLIP11.47□□□□□ -0.57
CCDC90B-216ENST00000529856 SYPL1Q16563 259 aa11.47□□□□□ -0.57
CCDC90B-216ENST00000529856 TMEM44Q2T9K0 475 aa11.47□□□□□ -0.57
CCDC90B-216ENST00000529856 ACSF3Q4G176 576 aaPredicted RBP11.47□□□□□ -0.57
CCDC90B-216ENST00000529856 GPAT3Q53EU6 434 aa11.47□□□□□ -0.57
CCDC90B-216ENST00000529856 PAGE3Q5JUK9 113 aa11.47□□□□□ -0.57
CCDC90B-216ENST00000529856 PDZK1Q5T2W1 519 aa11.47□□□□□ -0.57
CCDC90B-216ENST00000529856 LRIF1Q5T3J3 769 aa11.47□□□□□ -0.57
CCDC90B-216ENST00000529856 FRRS1Q6ZNA5 592 aa11.47□□□□□ -0.57
CCDC90B-216ENST00000529856 ANKFN1Q8N957 763 aa11.47□□□□□ -0.57
CCDC90B-216ENST00000529856 ZPLD1Q8TCW7 415 aa11.47□□□□□ -0.57
CCDC90B-216ENST00000529856 OIT3Q8WWZ8 545 aa11.47□□□□□ -0.57
CCDC90B-216ENST00000529856 SH3YL1Q96HL8 342 aaPredicted RBP11.47□□□□□ -0.57
CCDC90B-216ENST00000529856 ZNF317Q96PQ6 595 aaPredicted RBP11.47□□□□□ -0.57
CCDC90B-216ENST00000529856 TRNT1Q96Q11 434 aaKnown RBP11.47□□□□□ -0.57
CCDC90B-216ENST00000529856 KLHDC3Q9BQ90 382 aa11.47□□□□□ -0.57
CCDC90B-216ENST00000529856 PIGQQ9BRB3 760 aa11.47□□□□□ -0.57
CCDC90B-216ENST00000529856 COQ3Q9NZJ6 369 aa11.47□□□□□ -0.57
CCDC90B-216ENST00000529856 ICAM5Q9UMF0 924 aa11.47□□□□□ -0.57
CCDC90B-216ENST00000529856 RNF6Q9Y252 685 aa11.47□□□□□ -0.57
CCDC90B-216ENST00000529856 CARD8Q9Y2G2 431 aa11.47□□□□□ -0.57
CCDC90B-216ENST00000529856 ZNF337Q9Y3M9 751 aa11.47□□□□□ -0.57
CCDC90B-216ENST00000529856 SPTAN1Q13813 2472 aaKnown RBP11.47□□□□□ -0.57
CCDC90B-216ENST00000529856 ARHGAP21Q5T5U3 1957 aa11.47□□□□□ -0.57
CCDC90B-216ENST00000529856 FLNBO75369 2602 aaKnown RBP11.46□□□□□ -0.57
CCDC90B-216ENST00000529856 HECTD1Q9ULT8 2610 aa11.46□□□□□ -0.57
CCDC90B-216ENST00000529856 OR2M5A3KFT3 312 aa11.46□□□□□ -0.57
CCDC90B-216ENST00000529856 SERINC4A6NH21 518 aa11.46□□□□□ -0.57
CCDC90B-216ENST00000529856 KDM4EB2RXH2 506 aaPredicted RBP11.46□□□□□ -0.57
CCDC90B-216ENST00000529856 GTPBP1O00178 669 aaKnown RBP11.46□□□□□ -0.57
CCDC90B-216ENST00000529856 CLIC1O00299 241 aa11.46□□□□□ -0.57
CCDC90B-216ENST00000529856 HCRTR2O43614 444 aa11.46□□□□□ -0.57
CCDC90B-216ENST00000529856 EIF4E2O60573 245 aaKnown RBP11.46□□□□□ -0.57
CCDC90B-216ENST00000529856 TNFRSF21O75509 655 aa11.46□□□□□ -0.57
CCDC90B-216ENST00000529856 H6PDO95479 791 aa11.46□□□□□ -0.57
CCDC90B-216ENST00000529856 CHRM4P08173 479 aa11.46□□□□□ -0.57
CCDC90B-216ENST00000529856 PEPDP12955 493 aa11.46□□□□□ -0.57
CCDC90B-216ENST00000529856 ETFAP13804 333 aa11.46□□□□□ -0.57
CCDC90B-216ENST00000529856 ZNF708P17019 499 aa11.46□□□□□ -0.57
CCDC90B-216ENST00000529856 CRATP43155 626 aa11.46□□□□□ -0.57
CCDC90B-216ENST00000529856 RNF144AP50876 292 aaPredicted RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms