RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 POLR1CO15160 346 aaPredicted RBP13.66□□□□□ -0.22
ECHDC1-220ENST00000528402 CHP2O43745 196 aa13.66□□□□□ -0.22
ECHDC1-220ENST00000528402 MAN1A2O60476 641 aa13.66□□□□□ -0.22
ECHDC1-220ENST00000528402 RAB36O95755 333 aa13.66□□□□□ -0.22
ECHDC1-220ENST00000528402 INHBBP09529 407 aa13.66□□□□□ -0.22
ECHDC1-220ENST00000528402 GIMD1P0DJR0 217 aa13.66□□□□□ -0.22
ECHDC1-220ENST00000528402 BMP7P18075 431 aa13.66□□□□□ -0.22
ECHDC1-220ENST00000528402 HTR2AP28223 471 aa13.66□□□□□ -0.22
ECHDC1-220ENST00000528402 SSTR4P31391 388 aa13.66□□□□□ -0.22
ECHDC1-220ENST00000528402 GRK5P34947 590 aa13.66□□□□□ -0.22
ECHDC1-220ENST00000528402 LIPAP38571 399 aa13.66□□□□□ -0.22
ECHDC1-220ENST00000528402 ADH7P40394 386 aa13.66□□□□□ -0.22
ECHDC1-220ENST00000528402 PPICP45877 212 aa13.66□□□□□ -0.22
ECHDC1-220ENST00000528402 RAB15P59190 212 aa13.66□□□□□ -0.22
ECHDC1-220ENST00000528402 HOXC5Q00444 222 aa13.66□□□□□ -0.22
ECHDC1-220ENST00000528402 ERV3-1Q14264 604 aa13.66□□□□□ -0.22
ECHDC1-220ENST00000528402 MINDY4Q4G0A6 757 aa13.66□□□□□ -0.22
ECHDC1-220ENST00000528402 C3orf38Q5JPI3 329 aa13.66□□□□□ -0.22
ECHDC1-220ENST00000528402 TMEM71Q6P5X7 295 aa13.66□□□□□ -0.22
ECHDC1-220ENST00000528402 C19orf48Q6RUI8 117 aa13.66□□□□□ -0.22
ECHDC1-220ENST00000528402 TTLL10Q6ZVT0 673 aa13.66□□□□□ -0.22
ECHDC1-220ENST00000528402 USP43Q70EL4 1123 aa13.66□□□□□ -0.22
ECHDC1-220ENST00000528402 NANOGP1Q8N7R0 232 aa13.66□□□□□ -0.22
ECHDC1-220ENST00000528402 POGLUT1Q8NBL1 392 aa13.66□□□□□ -0.22
ECHDC1-220ENST00000528402 KBTBD8Q8NFY9 601 aa13.66□□□□□ -0.22
ECHDC1-220ENST00000528402 OR52L1Q8NGH7 329 aa13.66□□□□□ -0.22
ECHDC1-220ENST00000528402 OR9Q1Q8NGQ5 310 aa13.66□□□□□ -0.22
ECHDC1-220ENST00000528402 C16orf52Q8NHV5 167 aa13.66□□□□□ -0.22
ECHDC1-220ENST00000528402 DOK4Q8TEW6 326 aa13.66□□□□□ -0.22
ECHDC1-220ENST00000528402 TMEM255BQ8WV15 326 aa13.66□□□□□ -0.22
ECHDC1-220ENST00000528402 ZHX1-C8orf76Q96EF9 292 aa13.66□□□□□ -0.22
ECHDC1-220ENST00000528402 MGLLQ99685 303 aa13.66□□□□□ -0.22
ECHDC1-220ENST00000528402 RBCK1Q9BYM8 510 aa13.66□□□□□ -0.22
ECHDC1-220ENST00000528402 FN3KQ9H479 309 aa13.66□□□□□ -0.22
ECHDC1-220ENST00000528402 ZNF768Q9H5H4 540 aaKnown RBP13.66□□□□□ -0.22
ECHDC1-220ENST00000528402 EGLN3Q9H6Z9 239 aa13.66□□□□□ -0.22
ECHDC1-220ENST00000528402 SIAEQ9HAT2 523 aa13.66□□□□□ -0.22
ECHDC1-220ENST00000528402 ZNF304Q9HCX3 659 aa13.66□□□□□ -0.22
ECHDC1-220ENST00000528402 LANCL2Q9NS86 450 aa13.66□□□□□ -0.22
ECHDC1-220ENST00000528402 DNAJC27Q9NZQ0 273 aa13.66□□□□□ -0.22
ECHDC1-220ENST00000528402 CNIH4Q9P003 139 aa13.66□□□□□ -0.22
ECHDC1-220ENST00000528402 H2AFY2Q9P0M6 372 aaPredicted RBP13.66□□□□□ -0.22
ECHDC1-220ENST00000528402 KLHL3Q9UH77 587 aa13.66□□□□□ -0.22
ECHDC1-220ENST00000528402 SRPK3Q9UPE1 567 aa13.66□□□□□ -0.22
ECHDC1-220ENST00000528402 ERVK-19Q9WJR5 959 aa13.66□□□□□ -0.22
ECHDC1-220ENST00000528402 EXOSC1Q9Y3B2 195 aaKnown RBP13.66□□□□□ -0.22
ECHDC1-220ENST00000528402 OR10H1Q9Y4A9 318 aa13.66□□□□□ -0.22
ECHDC1-220ENST00000528402 PCDH15Q96QU1 1955 aa13.66□□□□□ -0.22
ECHDC1-220ENST00000528402 A0A0B4J2E0 115 aa13.65□□□□□ -0.22
ECHDC1-220ENST00000528402 A0A1B0GX12 115 aa13.65□□□□□ -0.22
ECHDC1-220ENST00000528402 C17orf105B2RV13 164 aa13.65□□□□□ -0.22
ECHDC1-220ENST00000528402 M0R129 80 aa13.65□□□□□ -0.22
ECHDC1-220ENST00000528402 CDC123O75794 336 aaPredicted RBP13.65□□□□□ -0.22
ECHDC1-220ENST00000528402 LYPD3O95274 346 aa13.65□□□□□ -0.22
ECHDC1-220ENST00000528402 PTHP01270 115 aa13.65□□□□□ -0.22
ECHDC1-220ENST00000528402 SCG5P05408 212 aa13.65□□□□□ -0.22
ECHDC1-220ENST00000528402 CT45A8P0DMV1 189 aa13.65□□□□□ -0.22
ECHDC1-220ENST00000528402 CT45A9P0DMV2 189 aa13.65□□□□□ -0.22
ECHDC1-220ENST00000528402 MAOAP21397 527 aa13.65□□□□□ -0.22
ECHDC1-220ENST00000528402 ALAS2P22557 587 aa13.65□□□□□ -0.22
ECHDC1-220ENST00000528402 RORAP35398 523 aa13.65□□□□□ -0.22
ECHDC1-220ENST00000528402 DHPSP49366 369 aaPredicted RBP13.65□□□□□ -0.22
ECHDC1-220ENST00000528402 TMED1Q13445 227 aa13.65□□□□□ -0.22
ECHDC1-220ENST00000528402 SYT16Q17RD7 645 aa13.65□□□□□ -0.22
ECHDC1-220ENST00000528402 PGGHGQ32M88 737 aa13.65□□□□□ -0.22
ECHDC1-220ENST00000528402 CT45A2Q5DJT8 189 aa13.65□□□□□ -0.22
ECHDC1-220ENST00000528402 ARMC4Q5T2S8 1044 aa13.65□□□□□ -0.22
ECHDC1-220ENST00000528402 PDZK1Q5T2W1 519 aa13.65□□□□□ -0.22
ECHDC1-220ENST00000528402 ULK3Q6PHR2 472 aa13.65□□□□□ -0.22
ECHDC1-220ENST00000528402 BMP8AQ7Z5Y6 402 aa13.65□□□□□ -0.22
ECHDC1-220ENST00000528402 ADCK1Q86TW2 530 aa13.65□□□□□ -0.22
ECHDC1-220ENST00000528402 SLCO6A1Q86UG4 719 aa13.65□□□□□ -0.22
ECHDC1-220ENST00000528402 TMEM151BQ8IW70 566 aa13.65□□□□□ -0.22
ECHDC1-220ENST00000528402 IQCF1Q8N6M8 205 aa13.65□□□□□ -0.22
ECHDC1-220ENST00000528402 ZNF527Q8NB42 609 aa13.65□□□□□ -0.22
ECHDC1-220ENST00000528402 ANKK1Q8NFD2 765 aa13.65□□□□□ -0.22
ECHDC1-220ENST00000528402 DYNC2LI1Q8TCX1 351 aa13.65□□□□□ -0.22
ECHDC1-220ENST00000528402 SENP5Q96HI0 755 aaPredicted RBP13.65□□□□□ -0.22
ECHDC1-220ENST00000528402 PLA2G12AQ9BZM1 189 aa13.65□□□□□ -0.22
ECHDC1-220ENST00000528402 SIDT1Q9NXL6 827 aaKnown RBP13.65□□□□□ -0.22
ECHDC1-220ENST00000528402 DNAJB12Q9NXW2 375 aaKnown RBP13.65□□□□□ -0.22
ECHDC1-220ENST00000528402 RPS6KB2Q9UBS0 482 aa13.65□□□□□ -0.22
ECHDC1-220ENST00000528402 IGKV3D-11A0A0A0MRZ8 115 aa13.64□□□□□ -0.23
ECHDC1-220ENST00000528402 CENPVL1A0A0U1RR11 272 aa13.64□□□□□ -0.23
ECHDC1-220ENST00000528402 A0A1B0GTQ1 180 aa13.64□□□□□ -0.23
ECHDC1-220ENST00000528402 A0A1B0GX78 115 aa13.64□□□□□ -0.23
ECHDC1-220ENST00000528402 MYL12BO14950 172 aa13.64□□□□□ -0.23
ECHDC1-220ENST00000528402 SURF4O15260 269 aa13.64□□□□□ -0.23
ECHDC1-220ENST00000528402 HCN1O60741 890 aa13.64□□□□□ -0.23
ECHDC1-220ENST00000528402 ANKRD34CP0C6C1 535 aa13.64□□□□□ -0.23
ECHDC1-220ENST00000528402 GKN3PP0CG01 181 aa13.64□□□□□ -0.23
ECHDC1-220ENST00000528402 IFI30P13284 250 aa13.64□□□□□ -0.23
ECHDC1-220ENST00000528402 MYL12AP19105 171 aa13.64□□□□□ -0.23
ECHDC1-220ENST00000528402 ENDOUP21128 410 aaKnown RBP13.64□□□□□ -0.23
ECHDC1-220ENST00000528402 FBLP22087 321 aaKnown RBP13.64□□□□□ -0.23
ECHDC1-220ENST00000528402 EPHA8P29322 1005 aaPredicted RBP13.64□□□□□ -0.23
ECHDC1-220ENST00000528402 ACAA2P42765 397 aaKnown RBP13.64□□□□□ -0.23
ECHDC1-220ENST00000528402 SEPHS1P49903 392 aa13.64□□□□□ -0.23
ECHDC1-220ENST00000528402 ENTPD1P49961 510 aa13.64□□□□□ -0.23
ECHDC1-220ENST00000528402 GPR143P51810 404 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms