RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 CHDHQ8NE62 594 aaPredicted RBP23.82■■□□□ 1.4
TSPAN4-217ENST00000527644 LRRC8CQ8TDW0 803 aa23.82■■□□□ 1.4
TSPAN4-217ENST00000527644 ZFP3Q96NJ6 502 aa23.82■■□□□ 1.4
TSPAN4-217ENST00000527644 SDF2Q99470 211 aa23.82■■□□□ 1.4
TSPAN4-217ENST00000527644 SERHL2Q9H4I8 314 aa23.82■■□□□ 1.4
TSPAN4-217ENST00000527644 APCP25054 2843 aa23.82■■□□□ 1.4
TSPAN4-217ENST00000527644 HMGB1P1B2RPK0 211 aaPredicted RBP23.81■■□□□ 1.4
TSPAN4-217ENST00000527644 PGRP06401 933 aa23.81■■□□□ 1.4
TSPAN4-217ENST00000527644 DGKQP52824 942 aa23.81■■□□□ 1.4
TSPAN4-217ENST00000527644 LRRC74AQ0VAA2 488 aa23.81■■□□□ 1.4
TSPAN4-217ENST00000527644 CD226Q15762 336 aa23.81■■□□□ 1.4
TSPAN4-217ENST00000527644 GSTA3Q16772 222 aa23.81■■□□□ 1.4
TSPAN4-217ENST00000527644 TMEM44Q2T9K0 475 aa23.81■■□□□ 1.4
TSPAN4-217ENST00000527644 PDCD4Q53EL6 469 aaKnown RBP23.81■■□□□ 1.4
TSPAN4-217ENST00000527644 DMRTC2Q8IXT2 367 aaPredicted RBP23.81■■□□□ 1.4
TSPAN4-217ENST00000527644 RELL2Q8NC24 303 aaPredicted RBP23.81■■□□□ 1.4
TSPAN4-217ENST00000527644 OR5M1Q8NGP8 315 aa23.81■■□□□ 1.4
TSPAN4-217ENST00000527644 B4GALNT2Q8NHY0 566 aa23.81■■□□□ 1.4
TSPAN4-217ENST00000527644 EXD2Q9NVH0 621 aa23.81■■□□□ 1.4
TSPAN4-217ENST00000527644 CLCF1Q9UBD9 225 aa23.81■■□□□ 1.4
TSPAN4-217ENST00000527644 VDAC3Q9Y277 283 aa23.81■■□□□ 1.4
TSPAN4-217ENST00000527644 AP4B1Q9Y6B7 739 aa23.81■■□□□ 1.4
TSPAN4-217ENST00000527644 USH1CQ9Y6N9 552 aa23.81■■□□□ 1.4
TSPAN4-217ENST00000527644 KIAA1549Q9HCM3 1950 aa23.81■■□□□ 1.4
TSPAN4-217ENST00000527644 NPIPB9F8W1W9 429 aa23.8■■□□□ 1.4
TSPAN4-217ENST00000527644 H3BNH8 94 aa23.8■■□□□ 1.4
TSPAN4-217ENST00000527644 HCRTR2O43614 444 aa23.8■■□□□ 1.4
TSPAN4-217ENST00000527644 RCBTB2O95199 551 aa23.8■■□□□ 1.4
TSPAN4-217ENST00000527644 AGR2O95994 175 aa23.8■■□□□ 1.4
TSPAN4-217ENST00000527644 IL18BPO95998 194 aa23.8■■□□□ 1.4
TSPAN4-217ENST00000527644 ZNF17P17021 662 aa23.8■■□□□ 1.4
TSPAN4-217ENST00000527644 SSTR2P30874 369 aa23.8■■□□□ 1.4
TSPAN4-217ENST00000527644 OPRM1P35372 400 aa23.8■■□□□ 1.4
TSPAN4-217ENST00000527644 SAXO2Q658L1 398 aa23.8■■□□□ 1.4
TSPAN4-217ENST00000527644 UBQLNLQ8IYU4 475 aa23.8■■□□□ 1.4
TSPAN4-217ENST00000527644 PHOSPHO1Q8TCT1 267 aa23.8■■□□□ 1.4
TSPAN4-217ENST00000527644 ZBTB8AQ96BR9 441 aa23.8■■□□□ 1.4
TSPAN4-217ENST00000527644 NEURL3Q96EH8 262 aa23.8■■□□□ 1.4
TSPAN4-217ENST00000527644 C14orf79Q96F83 325 aa23.8■■□□□ 1.4
TSPAN4-217ENST00000527644 LRRC46Q96FV0 321 aa23.8■■□□□ 1.4
TSPAN4-217ENST00000527644 SH3YL1Q96HL8 342 aaPredicted RBP23.8■■□□□ 1.4
TSPAN4-217ENST00000527644 OR52E6Q96RD3 313 aa23.8■■□□□ 1.4
TSPAN4-217ENST00000527644 OR51I1Q9H343 314 aa23.8■■□□□ 1.4
TSPAN4-217ENST00000527644 SLC24A3Q9HC58 644 aa23.8■■□□□ 1.4
TSPAN4-217ENST00000527644 STOML1Q9UBI4 398 aa23.8■■□□□ 1.4
TSPAN4-217ENST00000527644 DOCK7Q96N67 2140 aa23.8■■□□□ 1.4
TSPAN4-217ENST00000527644 NPIPA5A0A0B4J1W7 369 aa23.79■■□□□ 1.4
TSPAN4-217ENST00000527644 NPIPA7E9PJI5 369 aa23.79■■□□□ 1.4
TSPAN4-217ENST00000527644 H3BML4 177 aa23.79■■□□□ 1.4
TSPAN4-217ENST00000527644 SYT5O00445 386 aa23.79■■□□□ 1.4
TSPAN4-217ENST00000527644 SLC22A3O75751 556 aa23.79■■□□□ 1.4
TSPAN4-217ENST00000527644 NPIPA8P0DM63 369 aa23.79■■□□□ 1.4
TSPAN4-217ENST00000527644 TMIGD3P0DMS9 266 aaPredicted RBP23.79■■□□□ 1.4
TSPAN4-217ENST00000527644 ASCL1P50553 236 aa23.79■■□□□ 1.4
TSPAN4-217ENST00000527644 ZNF41P51814 821 aaPredicted RBP23.79■■□□□ 1.4
TSPAN4-217ENST00000527644 ARHGAP11BQ3KRB8 267 aa23.79■■□□□ 1.4
TSPAN4-217ENST00000527644 EPGNQ6UW88 154 aa23.79■■□□□ 1.4
TSPAN4-217ENST00000527644 GRAMD2AQ8IUY3 354 aa23.79■■□□□ 1.4
TSPAN4-217ENST00000527644 TRIML2Q8N7C3 387 aa23.79■■□□□ 1.4
TSPAN4-217ENST00000527644 OR52B2Q96RD2 323 aa23.79■■□□□ 1.4
TSPAN4-217ENST00000527644 PANX1Q96RD7 426 aa23.79■■□□□ 1.4
TSPAN4-217ENST00000527644 SLC35A5Q9BS91 424 aa23.79■■□□□ 1.4
TSPAN4-217ENST00000527644 NMUR2Q9GZQ4 415 aa23.79■■□□□ 1.4
TSPAN4-217ENST00000527644 MED17Q9NVC6 651 aa23.79■■□□□ 1.4
TSPAN4-217ENST00000527644 DTNAQ9Y4J8 743 aa23.79■■□□□ 1.4
TSPAN4-217ENST00000527644 C7orf72A4D263 438 aa23.78■■□□□ 1.4
TSPAN4-217ENST00000527644 C9JVG2 144 aa23.78■■□□□ 1.4
TSPAN4-217ENST00000527644 UBDO15205 165 aa23.78■■□□□ 1.4
TSPAN4-217ENST00000527644 DIAPH2O60879 1101 aa23.78■■□□□ 1.4
TSPAN4-217ENST00000527644 STX11O75558 287 aa23.78■■□□□ 1.4
TSPAN4-217ENST00000527644 TGDSO95455 350 aa23.78■■□□□ 1.4
TSPAN4-217ENST00000527644 IL6P05231 212 aa23.78■■□□□ 1.4
TSPAN4-217ENST00000527644 CHI3L1P36222 383 aaPredicted RBP23.78■■□□□ 1.4
TSPAN4-217ENST00000527644 CLDN15P56746 228 aa23.78■■□□□ 1.4
TSPAN4-217ENST00000527644 FBXL19-AS1Q494R0 122 aa23.78■■□□□ 1.4
TSPAN4-217ENST00000527644 DDX59Q5T1V6 619 aaKnown RBP eCLIP23.78■■□□□ 1.48e-6■■■■■ 27.9
TSPAN4-217ENST00000527644 ATAD3BQ5T9A4 648 aa23.78■■□□□ 1.4
TSPAN4-217ENST00000527644 HEPHL1Q6MZM0 1159 aa23.78■■□□□ 1.4
TSPAN4-217ENST00000527644 C16orf62Q7Z3J2 963 aa23.78■■□□□ 1.4
TSPAN4-217ENST00000527644 GTPBP8Q8N3Z3 284 aaPredicted RBP23.78■■□□□ 1.4
TSPAN4-217ENST00000527644 DYDC1Q8WWB3 177 aa23.78■■□□□ 1.4
TSPAN4-217ENST00000527644 ACBD3Q9H3P7 528 aa23.78■■□□□ 1.4
TSPAN4-217ENST00000527644 ZIM2Q9NZV7 527 aa23.78■■□□□ 1.4
TSPAN4-217ENST00000527644 LRBAP50851 2863 aa23.77■■□□□ 1.4
TSPAN4-217ENST00000527644 DCHS2Q6V1P9 2916 aa23.77■■□□□ 1.4
TSPAN4-217ENST00000527644 CCDC154A6NI56 674 aa23.77■■□□□ 1.4
TSPAN4-217ENST00000527644 SHISA8B8ZZ34 492 aa23.77■■□□□ 1.4
TSPAN4-217ENST00000527644 TNFRSF21O75509 655 aa23.77■■□□□ 1.4
TSPAN4-217ENST00000527644 OR12D1P0DN82 309 aa23.77■■□□□ 1.4
TSPAN4-217ENST00000527644 SUCLG1P53597 346 aaKnown RBP23.77■■□□□ 1.4
TSPAN4-217ENST00000527644 CASP9P55211 416 aa23.77■■□□□ 1.4
TSPAN4-217ENST00000527644 PPP2R2AP63151 447 aa23.77■■□□□ 1.4
TSPAN4-217ENST00000527644 EEF1A1P68104 462 aaKnown RBP23.77■■□□□ 1.4
TSPAN4-217ENST00000527644 ZNF117Q03924 483 aa23.77■■□□□ 1.4
TSPAN4-217ENST00000527644 PLPPR5Q32ZL2 321 aa23.77■■□□□ 1.4
TSPAN4-217ENST00000527644 EEF1A1P5Q5VTE0 462 aa23.77■■□□□ 1.4
TSPAN4-217ENST00000527644 PLXDC2Q6UX71 529 aa23.77■■□□□ 1.4
TSPAN4-217ENST00000527644 XAGE5Q8WWM1 108 aa23.77■■□□□ 1.4
TSPAN4-217ENST00000527644 MARK4Q96L34 752 aa23.77■■□□□ 1.4
TSPAN4-217ENST00000527644 SFXN3Q9BWM7 321 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms