RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 EFHD2Q96C19 240 aaPredicted RBP18.89■□□□□ 0.61
SMCO4-203ENST00000526869 LMF1Q96S06 567 aa18.89■□□□□ 0.61
SMCO4-203ENST00000526869 DGCR6LQ9BY27 220 aa18.89■□□□□ 0.61
SMCO4-203ENST00000526869 GRIP2Q9C0E4 1043 aa18.89■□□□□ 0.61
SMCO4-203ENST00000526869 TEX51A0A1B0GUA7 166 aa18.88■□□□□ 0.61
SMCO4-203ENST00000526869 LOC100130705A0A1B0GUX0 176 aa18.88■□□□□ 0.61
SMCO4-203ENST00000526869 A0A1W2PNU3 283 aaPredicted RBP18.88■□□□□ 0.61
SMCO4-203ENST00000526869 TRAPPC13A5PLN9 417 aa18.88■□□□□ 0.61
SMCO4-203ENST00000526869 CPSF4LA6NMK7 179 aaKnown RBP18.88■□□□□ 0.61
SMCO4-203ENST00000526869 SEC24DO94855 1032 aaPredicted RBP18.88■□□□□ 0.61
SMCO4-203ENST00000526869 TNFAIP8O95379 198 aa18.88■□□□□ 0.61
SMCO4-203ENST00000526869 UTS2O95399 124 aa18.88■□□□□ 0.61
SMCO4-203ENST00000526869 UBTFL6P0CB48 400 aaPredicted RBP18.88■□□□□ 0.61
SMCO4-203ENST00000526869 ENDOUP21128 410 aaKnown RBP18.88■□□□□ 0.61
SMCO4-203ENST00000526869 CSRP1P21291 193 aaKnown RBP18.88■□□□□ 0.61
SMCO4-203ENST00000526869 FUT4P22083 530 aa18.88■□□□□ 0.61
SMCO4-203ENST00000526869 IL12BP29460 328 aa18.88■□□□□ 0.61
SMCO4-203ENST00000526869 IFNGR2P38484 337 aa18.88■□□□□ 0.61
SMCO4-203ENST00000526869 UGT2B15P54855 530 aa18.88■□□□□ 0.61
SMCO4-203ENST00000526869 NRG3P56975 720 aa18.88■□□□□ 0.61
SMCO4-203ENST00000526869 PLCXD2Q0VAA5 305 aa18.88■□□□□ 0.61
SMCO4-203ENST00000526869 PCOLCEQ15113 449 aa18.88■□□□□ 0.61
SMCO4-203ENST00000526869 FNDC7Q5VTL7 733 aa18.88■□□□□ 0.61
SMCO4-203ENST00000526869 ZNF613Q6PF04 617 aa18.88■□□□□ 0.61
SMCO4-203ENST00000526869 CD300LDQ6UXZ3 194 aa18.88■□□□□ 0.61
SMCO4-203ENST00000526869 GALNT5Q7Z7M9 940 aa18.88■□□□□ 0.61
SMCO4-203ENST00000526869 ZNF614Q8N883 585 aa18.88■□□□□ 0.61
SMCO4-203ENST00000526869 OR4C3Q8NH37 302 aa18.88■□□□□ 0.61
SMCO4-203ENST00000526869 ADAMTS16Q8TE57 1224 aa18.88■□□□□ 0.61
SMCO4-203ENST00000526869 SLC41A3Q96GZ6 507 aa18.88■□□□□ 0.61
SMCO4-203ENST00000526869 PITX2Q99697 317 aa18.88■□□□□ 0.61
SMCO4-203ENST00000526869 TRIM2Q9C040 744 aa18.88■□□□□ 0.61
SMCO4-203ENST00000526869 RIBC2Q9H4K1 309 aa18.88■□□□□ 0.61
SMCO4-203ENST00000526869 ZNF696Q9H7X3 374 aa18.88■□□□□ 0.61
SMCO4-203ENST00000526869 RYDENQ9NUL5 291 aaKnown RBP18.88■□□□□ 0.61
SMCO4-203ENST00000526869 HSPE1-MOB4S4R3N1 261 aa18.88■□□□□ 0.61
SMCO4-203ENST00000526869 TRBV11-1A0A0K0K1C0 115 aa18.87■□□□□ 0.61
SMCO4-203ENST00000526869 A0A1W2PQD3 144 aa18.87■□□□□ 0.61
SMCO4-203ENST00000526869 PMS2P1A4D2B8 440 aa18.87■□□□□ 0.61
SMCO4-203ENST00000526869 BCKDKO14874 412 aa18.87■□□□□ 0.61
SMCO4-203ENST00000526869 REM1O75628 298 aa18.87■□□□□ 0.61
SMCO4-203ENST00000526869 ZFAND5O76080 213 aa18.87■□□□□ 0.61
SMCO4-203ENST00000526869 FTH1P19P0C7X4 201 aa18.87■□□□□ 0.61
SMCO4-203ENST00000526869 CYP4B1P13584 511 aa18.87■□□□□ 0.61
SMCO4-203ENST00000526869 PRG2P13727 222 aa18.87■□□□□ 0.61
SMCO4-203ENST00000526869 NAGAP17050 411 aa18.87■□□□□ 0.61
SMCO4-203ENST00000526869 HTR2AP28223 471 aa18.87■□□□□ 0.61
SMCO4-203ENST00000526869 MYBPC1Q00872 1141 aa18.87■□□□□ 0.61
SMCO4-203ENST00000526869 NPRL3Q12980 569 aa18.87■□□□□ 0.61
SMCO4-203ENST00000526869 EXT1Q16394 746 aa18.87■□□□□ 0.61
SMCO4-203ENST00000526869 PGBD2Q6P3X8 592 aa18.87■□□□□ 0.61
SMCO4-203ENST00000526869 MUC6Q6W4X9 2439 aa18.87■□□□□ 0.61
SMCO4-203ENST00000526869 TIPARPQ7Z3E1 657 aaKnown RBP18.87■□□□□ 0.61
SMCO4-203ENST00000526869 GDF7Q7Z4P5 450 aa18.87■□□□□ 0.61
SMCO4-203ENST00000526869 C8orf59Q8N0T1 100 aaPredicted RBP18.87■□□□□ 0.61
SMCO4-203ENST00000526869 ESX1Q8N693 406 aa18.87■□□□□ 0.61
SMCO4-203ENST00000526869 SETD9Q8NE22 299 aa18.87■□□□□ 0.61
SMCO4-203ENST00000526869 CT55Q8WUE5 264 aa18.87■□□□□ 0.61
SMCO4-203ENST00000526869 ACOT11Q8WXI4 607 aaPredicted RBP18.87■□□□□ 0.61
SMCO4-203ENST00000526869 OMA1Q96E52 524 aa18.87■□□□□ 0.61
SMCO4-203ENST00000526869 MUS81Q96NY9 551 aa18.87■□□□□ 0.61
SMCO4-203ENST00000526869 EXOSC3Q9NQT5 275 aaKnown RBP18.87■□□□□ 0.61
SMCO4-203ENST00000526869 IGHV1-45A0A0A0MS14 117 aa18.86■□□□□ 0.61
SMCO4-203ENST00000526869 OR6C70A6NIJ9 312 aa18.86■□□□□ 0.61
SMCO4-203ENST00000526869 SCDO00767 359 aa18.86■□□□□ 0.61
SMCO4-203ENST00000526869 OR10H3O60404 316 aa18.86■□□□□ 0.61
SMCO4-203ENST00000526869 ABCB7O75027 752 aa18.86■□□□□ 0.61
SMCO4-203ENST00000526869 CSTAP01040 98 aa18.86■□□□□ 0.61
SMCO4-203ENST00000526869 HPGDP15428 266 aa18.86■□□□□ 0.61
SMCO4-203ENST00000526869 MMP11P24347 488 aa18.86■□□□□ 0.61
SMCO4-203ENST00000526869 ABCD3P28288 659 aa18.86■□□□□ 0.61
SMCO4-203ENST00000526869 ACAA2P42765 397 aaKnown RBP18.86■□□□□ 0.61
SMCO4-203ENST00000526869 ESRRGP62508 458 aa18.86■□□□□ 0.61
SMCO4-203ENST00000526869 HOXC5Q00444 222 aa18.86■□□□□ 0.61
SMCO4-203ENST00000526869 IL1RL1Q01638 556 aa18.86■□□□□ 0.61
SMCO4-203ENST00000526869 COX10Q12887 443 aa18.86■□□□□ 0.61
SMCO4-203ENST00000526869 BLMHQ13867 455 aa18.86■□□□□ 0.61
SMCO4-203ENST00000526869 EFR3AQ14156 821 aa18.86■□□□□ 0.61
SMCO4-203ENST00000526869 OR1Q1Q15612 314 aa18.86■□□□□ 0.61
SMCO4-203ENST00000526869 ZNF691Q5VV52 312 aa18.86■□□□□ 0.61
SMCO4-203ENST00000526869 THAP5Q7Z6K1 395 aa18.86■□□□□ 0.61
SMCO4-203ENST00000526869 LSMEM1Q8N8F7 131 aa18.86■□□□□ 0.61
SMCO4-203ENST00000526869 OR4K5Q8NGD3 323 aa18.86■□□□□ 0.61
SMCO4-203ENST00000526869 C8orf44Q96CB5 159 aa18.86■□□□□ 0.61
SMCO4-203ENST00000526869 NIPSNAP1Q9BPW8 284 aa18.86■□□□□ 0.61
SMCO4-203ENST00000526869 MESP1Q9BRJ9 268 aa18.86■□□□□ 0.61
SMCO4-203ENST00000526869 PRR14Q9BWN1 585 aa18.86■□□□□ 0.61
SMCO4-203ENST00000526869 YTHDF1Q9BYJ9 559 aaKnown RBP18.86■□□□□ 0.61
SMCO4-203ENST00000526869 UCK2Q9BZX2 261 aa18.86■□□□□ 0.61
SMCO4-203ENST00000526869 NRSN2Q9GZP1 204 aa18.86■□□□□ 0.61
SMCO4-203ENST00000526869 TMEM27Q9HBJ8 222 aa18.86■□□□□ 0.61
SMCO4-203ENST00000526869 SCOCQ9UIL1 159 aa18.86■□□□□ 0.61
SMCO4-203ENST00000526869 NDRG4Q9ULP0 352 aaKnown RBP18.86■□□□□ 0.61
SMCO4-203ENST00000526869 HS3ST3B1Q9Y662 390 aa18.86■□□□□ 0.61
SMCO4-203ENST00000526869 PCNX2A6NKB5 2137 aa18.85■□□□□ 0.61
SMCO4-203ENST00000526869 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.85■□□□□ 0.61
SMCO4-203ENST00000526869 H3BNH8 94 aa18.85■□□□□ 0.61
SMCO4-203ENST00000526869 PRKNO60260 465 aaPredicted RBP18.85■□□□□ 0.61
SMCO4-203ENST00000526869 BCAS1O75363 584 aaPredicted RBP18.85■□□□□ 0.61
SMCO4-203ENST00000526869 LYPD3O95274 346 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms