RNA–Protein interactions for RNA: ENST00000526696.6

SSRP1-203, Transcript of structure specific recognition protein 1, humanhuman

TSL 3

Gene SSRP1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-203ENST00000526696 C1orf226A1L170 272 aa11.77□□□□□ -0.53
SSRP1-203ENST00000526696 H0YIV9 168 aa11.77□□□□□ -0.53
SSRP1-203ENST00000526696 K7EPI3 171 aa11.77□□□□□ -0.53
SSRP1-203ENST00000526696 SNUPNO95149 360 aaKnown RBP11.77□□□□□ -0.53
SSRP1-203ENST00000526696 DAOP14920 347 aa11.77□□□□□ -0.53
SSRP1-203ENST00000526696 SFTPDP35247 375 aa11.77□□□□□ -0.53
SSRP1-203ENST00000526696 FOXG1P55316 489 aaPredicted RBP11.77□□□□□ -0.53
SSRP1-203ENST00000526696 SLC25A3Q00325 362 aa11.77□□□□□ -0.53
SSRP1-203ENST00000526696 C17orf67Q0P5P2 114 aa11.77□□□□□ -0.53
SSRP1-203ENST00000526696 MLC1Q15049 377 aa11.77□□□□□ -0.53
SSRP1-203ENST00000526696 CPSF6Q16630 551 aaKnown RBP eCLIP11.77□□□□□ -0.53
SSRP1-203ENST00000526696 ARL13AQ5H913 290 aaPredicted RBP11.77□□□□□ -0.53
SSRP1-203ENST00000526696 CPTPQ5TA50 214 aa11.77□□□□□ -0.53
SSRP1-203ENST00000526696 SLC46A3Q7Z3Q1 461 aa11.77□□□□□ -0.53
SSRP1-203ENST00000526696 TMEM139Q8IV31 216 aa11.77□□□□□ -0.53
SSRP1-203ENST00000526696 CCDC116Q8IYX3 515 aa11.77□□□□□ -0.53
SSRP1-203ENST00000526696 LILRA2Q8N149 483 aa11.77□□□□□ -0.53
SSRP1-203ENST00000526696 WDR31Q8NA23 367 aa11.77□□□□□ -0.53
SSRP1-203ENST00000526696 OR9A2Q8NGT5 310 aa11.77□□□□□ -0.53
SSRP1-203ENST00000526696 ZNF75CPQ92670 426 aaPredicted RBP11.77□□□□□ -0.53
SSRP1-203ENST00000526696 CPNE4Q96A23 557 aaPredicted RBP11.77□□□□□ -0.53
SSRP1-203ENST00000526696 ZBTB8AQ96BR9 441 aa11.77□□□□□ -0.53
SSRP1-203ENST00000526696 REXO5Q96IC2 774 aaKnown RBP11.77□□□□□ -0.53
SSRP1-203ENST00000526696 ZNF300Q96RE9 604 aaPredicted RBP11.77□□□□□ -0.53
SSRP1-203ENST00000526696 MCMBPQ9BTE3 642 aa11.77□□□□□ -0.53
SSRP1-203ENST00000526696 SUCNR1Q9BXA5 334 aa11.77□□□□□ -0.53
SSRP1-203ENST00000526696 MED17Q9NVC6 651 aa11.77□□□□□ -0.53
SSRP1-203ENST00000526696 NTMQ9P121 344 aa11.77□□□□□ -0.53
SSRP1-203ENST00000526696 PPIAL4AQ9Y536 164 aa11.77□□□□□ -0.53
SSRP1-203ENST00000526696 PCDHGA11Q9Y5H2 935 aa11.77□□□□□ -0.53
SSRP1-203ENST00000526696 TENM3Q9P273 2699 aa11.77□□□□□ -0.53
SSRP1-203ENST00000526696 FOXE1O00358 373 aaPredicted RBP11.76□□□□□ -0.53
SSRP1-203ENST00000526696 SEMA3DO95025 777 aa11.76□□□□□ -0.53
SSRP1-203ENST00000526696 IL33O95760 270 aa11.76□□□□□ -0.53
SSRP1-203ENST00000526696 IGHV3-9P01782 118 aa11.76□□□□□ -0.53
SSRP1-203ENST00000526696 SNRPD2P62316 118 aaKnown RBP11.76□□□□□ -0.53
SSRP1-203ENST00000526696 PSPHP78330 225 aa11.76□□□□□ -0.53
SSRP1-203ENST00000526696 POU4F1Q01851 419 aa11.76□□□□□ -0.53
SSRP1-203ENST00000526696 SH2D4BQ5SQS7 431 aa11.76□□□□□ -0.53
SSRP1-203ENST00000526696 CCNYL2Q5T2Q4 361 aa11.76□□□□□ -0.53
SSRP1-203ENST00000526696 PDSS1Q5T2R2 415 aa11.76□□□□□ -0.53
SSRP1-203ENST00000526696 TRABD2AQ86V40 505 aa11.76□□□□□ -0.53
SSRP1-203ENST00000526696 C1QL4Q86Z23 238 aa11.76□□□□□ -0.53
SSRP1-203ENST00000526696 ZCCHC24Q8N2G6 241 aaKnown RBP11.76□□□□□ -0.53
SSRP1-203ENST00000526696 TEX9Q8N6V9 391 aa11.76□□□□□ -0.53
SSRP1-203ENST00000526696 OR7G2Q8NG99 324 aa11.76□□□□□ -0.53
SSRP1-203ENST00000526696 UBTD2Q8WUN7 234 aa11.76□□□□□ -0.53
SSRP1-203ENST00000526696 MAIP1Q8WWC4 291 aa11.76□□□□□ -0.53
SSRP1-203ENST00000526696 TM4SF18Q96CE8 201 aa11.76□□□□□ -0.53
SSRP1-203ENST00000526696 LRRC37BQ96QE4 947 aa11.76□□□□□ -0.53
SSRP1-203ENST00000526696 MRPL1Q9BYD6 325 aaKnown RBP11.76□□□□□ -0.53
SSRP1-203ENST00000526696 CAB39LQ9H9S4 337 aa11.76□□□□□ -0.53
SSRP1-203ENST00000526696 FKRPQ9H9S5 495 aa11.76□□□□□ -0.53
SSRP1-203ENST00000526696 POPDC3Q9HBV1 291 aa11.76□□□□□ -0.53
SSRP1-203ENST00000526696 OPTCQ9UBM4 332 aa11.76□□□□□ -0.53
SSRP1-203ENST00000526696 EPPK1P58107 5090 aaKnown RBP11.76□□□□□ -0.53
SSRP1-203ENST00000526696 A0A087WZY1 265 aa11.75□□□□□ -0.53
SSRP1-203ENST00000526696 LYNX1G3V0Z9 82 aa11.75□□□□□ -0.53
SSRP1-203ENST00000526696 PHGDHO43175 533 aaKnown RBP11.75□□□□□ -0.53
SSRP1-203ENST00000526696 BCAS2O75934 225 aaPredicted RBP11.75□□□□□ -0.53
SSRP1-203ENST00000526696 UTS2O95399 124 aa11.75□□□□□ -0.53
SSRP1-203ENST00000526696 MSMBP08118 114 aa11.75□□□□□ -0.53
SSRP1-203ENST00000526696 LYNX1P0DP58 116 aa11.75□□□□□ -0.53
SSRP1-203ENST00000526696 PHEXP78562 749 aa11.75□□□□□ -0.53
SSRP1-203ENST00000526696 PRR5P85299 388 aa11.75□□□□□ -0.53
SSRP1-203ENST00000526696 SRSF4Q08170 494 aaKnown RBP11.75□□□□□ -0.53
SSRP1-203ENST00000526696 HP1BP3Q5SSJ5 553 aaPredicted RBP11.75□□□□□ -0.53
SSRP1-203ENST00000526696 LIPJQ5W064 366 aa11.75□□□□□ -0.53
SSRP1-203ENST00000526696 FAHD2BQ6P2I3 314 aaPredicted RBP11.75□□□□□ -0.53
SSRP1-203ENST00000526696 UGT2A3Q6UWM9 527 aa11.75□□□□□ -0.53
SSRP1-203ENST00000526696 ZNF786Q8N393 782 aa11.75□□□□□ -0.53
SSRP1-203ENST00000526696 CFAP36Q96G28 342 aa11.75□□□□□ -0.53
SSRP1-203ENST00000526696 FAHD2AQ96GK7 314 aa11.75□□□□□ -0.53
SSRP1-203ENST00000526696 ACSS1Q9NUB1 689 aaPredicted RBP11.75□□□□□ -0.53
SSRP1-203ENST00000526696 ADAM29Q9UKF5 820 aa11.75□□□□□ -0.53
SSRP1-203ENST00000526696 MOKQ9UQ07 419 aa11.75□□□□□ -0.53
SSRP1-203ENST00000526696 RNF11Q9Y3C5 154 aa11.75□□□□□ -0.53
SSRP1-203ENST00000526696 GRIP1Q9Y3R0 1128 aa11.75□□□□□ -0.53
SSRP1-203ENST00000526696 WNT9BO14905 357 aa11.74□□□□□ -0.53
SSRP1-203ENST00000526696 RGS14O43566 566 aa11.74□□□□□ -0.53
SSRP1-203ENST00000526696 IGKV1D-16P01601 117 aa11.74□□□□□ -0.53
SSRP1-203ENST00000526696 IGFBP1P08833 259 aaPredicted RBP11.74□□□□□ -0.53
SSRP1-203ENST00000526696 NUDT17P0C025 328 aa11.74□□□□□ -0.53
SSRP1-203ENST00000526696 ME2P23368 584 aa11.74□□□□□ -0.53
SSRP1-203ENST00000526696 SERPINF1P36955 418 aa11.74□□□□□ -0.53
SSRP1-203ENST00000526696 IDH3GP51553 393 aaPredicted RBP11.74□□□□□ -0.53
SSRP1-203ENST00000526696 MAPK12P53778 367 aa11.74□□□□□ -0.53
SSRP1-203ENST00000526696 GRAMD1BQ3KR37 738 aa11.74□□□□□ -0.53
SSRP1-203ENST00000526696 CYP27C1Q4G0S4 372 aa11.74□□□□□ -0.53
SSRP1-203ENST00000526696 RNASEH2BQ5TBB1 312 aaKnown RBP11.74□□□□□ -0.53
SSRP1-203ENST00000526696 CARM1Q86X55 608 aa11.74□□□□□ -0.53
SSRP1-203ENST00000526696 TRIM58Q8NG06 486 aa11.74□□□□□ -0.53
SSRP1-203ENST00000526696 CLDND2Q8NHS1 167 aa11.74□□□□□ -0.53
SSRP1-203ENST00000526696 ERP27Q96DN0 273 aa11.74□□□□□ -0.53
SSRP1-203ENST00000526696 MUS81Q96NY9 551 aa11.74□□□□□ -0.53
SSRP1-203ENST00000526696 SERPINI1Q99574 410 aa11.74□□□□□ -0.53
SSRP1-203ENST00000526696 DESI2Q9BSY9 194 aa11.74□□□□□ -0.53
SSRP1-203ENST00000526696 TBL1XR1Q9BZK7 514 aa11.74□□□□□ -0.53
SSRP1-203ENST00000526696 SLITRK2Q9H156 845 aa11.74□□□□□ -0.53
SSRP1-203ENST00000526696 PLK3Q9H4B4 646 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms