RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 PLOD1Q02809 727 aaPredicted RBP3.67□□□□□ -1.82
CSDE1-211ENST00000525970 RGS1Q08116 209 aa3.67□□□□□ -1.82
CSDE1-211ENST00000525970 RIPPLY1Q0D2K3 151 aa3.67□□□□□ -1.82
CSDE1-211ENST00000525970 SIX1Q15475 284 aaPredicted RBP3.67□□□□□ -1.82
CSDE1-211ENST00000525970 MS4A18Q3C1V0 323 aa3.67□□□□□ -1.82
CSDE1-211ENST00000525970 TIGITQ495A1 244 aa3.67□□□□□ -1.82
CSDE1-211ENST00000525970 LCE1FQ5T754 118 aa3.67□□□□□ -1.82
CSDE1-211ENST00000525970 RFWD3Q6PCD5 774 aa3.67□□□□□ -1.82
CSDE1-211ENST00000525970 RUFY3Q7L099 469 aa3.67□□□□□ -1.82
CSDE1-211ENST00000525970 NANOGNBQ7Z5D8 188 aa3.67□□□□□ -1.82
CSDE1-211ENST00000525970 MOB3BQ86TA1 216 aa3.67□□□□□ -1.82
CSDE1-211ENST00000525970 NBPF5PQ86XG9 351 aaPredicted RBP3.67□□□□□ -1.82
CSDE1-211ENST00000525970 PHC2Q8IXK0 858 aa3.67□□□□□ -1.82
CSDE1-211ENST00000525970 BPIFB2Q8N4F0 458 aa3.67□□□□□ -1.82
CSDE1-211ENST00000525970 ZNF614Q8N883 585 aa3.67□□□□□ -1.82
CSDE1-211ENST00000525970 C15orf54Q8N8G6 183 aa3.67□□□□□ -1.82
CSDE1-211ENST00000525970 ZSCAN4Q8NAM6 433 aaPredicted RBP3.67□□□□□ -1.82
CSDE1-211ENST00000525970 TRPV1Q8NER1 839 aa3.67□□□□□ -1.82
CSDE1-211ENST00000525970 STXBP6Q8NFX7 210 aa3.67□□□□□ -1.82
CSDE1-211ENST00000525970 OR9K2Q8NGE7 335 aa3.67□□□□□ -1.82
CSDE1-211ENST00000525970 CNIH3Q8TBE1 160 aa3.67□□□□□ -1.82
CSDE1-211ENST00000525970 SLC2A14Q8TDB8 520 aa3.67□□□□□ -1.82
CSDE1-211ENST00000525970 TBCKQ8TEA7 893 aa3.67□□□□□ -1.82
CSDE1-211ENST00000525970 SCFD1Q8WVM8 642 aa3.67□□□□□ -1.82
CSDE1-211ENST00000525970 TADA1Q96BN2 335 aa3.67□□□□□ -1.82
CSDE1-211ENST00000525970 PLIN2Q99541 437 aa3.67□□□□□ -1.82
CSDE1-211ENST00000525970 SLC39A3Q9BRY0 314 aa3.67□□□□□ -1.82
CSDE1-211ENST00000525970 OCR1Q9BZK8 76 aa3.67□□□□□ -1.82
CSDE1-211ENST00000525970 ROPN1BQ9BZX4 212 aaPredicted RBP3.67□□□□□ -1.82
CSDE1-211ENST00000525970 RNF41Q9H4P4 317 aaPredicted RBP3.67□□□□□ -1.82
CSDE1-211ENST00000525970 MCCC2Q9HCC0 563 aa3.67□□□□□ -1.82
CSDE1-211ENST00000525970 ZFP14Q9HCL3 533 aa3.67□□□□□ -1.82
CSDE1-211ENST00000525970 ASIC3Q9UHC3 531 aa3.67□□□□□ -1.82
CSDE1-211ENST00000525970 BARX2Q9UMQ3 279 aaPredicted RBP3.67□□□□□ -1.82
CSDE1-211ENST00000525970 CAB39Q9Y376 341 aaPredicted RBP3.67□□□□□ -1.82
CSDE1-211ENST00000525970 MMP24Q9Y5R2 645 aa3.67□□□□□ -1.82
CSDE1-211ENST00000525970 USP16Q9Y5T5 823 aa3.67□□□□□ -1.82
CSDE1-211ENST00000525970 FRMPD3Q5JV73 1810 aa3.67□□□□□ -1.82
CSDE1-211ENST00000525970 IGLV4-3A0A075B6K6 122 aa3.66□□□□□ -1.82
CSDE1-211ENST00000525970 IGHV3OR16-12A0A075B7B8 117 aa3.66□□□□□ -1.82
CSDE1-211ENST00000525970 A0A1W2PPE3 182 aa3.66□□□□□ -1.82
CSDE1-211ENST00000525970 LRP5LA4QPB2 252 aa3.66□□□□□ -1.82
CSDE1-211ENST00000525970 DNALI1O14645 258 aaPredicted RBP3.66□□□□□ -1.82
CSDE1-211ENST00000525970 PRKAB2O43741 272 aa3.66□□□□□ -1.82
CSDE1-211ENST00000525970 CACNG3O60359 315 aa3.66□□□□□ -1.82
CSDE1-211ENST00000525970 CIB2O75838 187 aa3.66□□□□□ -1.82
CSDE1-211ENST00000525970 NDUFB10O96000 172 aa3.66□□□□□ -1.82
CSDE1-211ENST00000525970 NCK1P16333 377 aa3.66□□□□□ -1.82
CSDE1-211ENST00000525970 MX1P20591 662 aa3.66□□□□□ -1.82
CSDE1-211ENST00000525970 SLC1A4P43007 532 aa3.66□□□□□ -1.82
CSDE1-211ENST00000525970 GSK3BP49841 420 aa3.66□□□□□ -1.82
CSDE1-211ENST00000525970 EFNB2P52799 333 aa3.66□□□□□ -1.82
CSDE1-211ENST00000525970 PRRX1P54821 245 aa3.66□□□□□ -1.82
CSDE1-211ENST00000525970 ERVK11-1P61568 191 aa3.66□□□□□ -1.82
CSDE1-211ENST00000525970 RPL8P62917 257 aaKnown RBP3.66□□□□□ -1.82
CSDE1-211ENST00000525970 BDH1Q02338 343 aa3.66□□□□□ -1.82
CSDE1-211ENST00000525970 RAB40BQ12829 278 aa3.66□□□□□ -1.82
CSDE1-211ENST00000525970 FASTKD3Q14CZ7 662 aaKnown RBP3.66□□□□□ -1.82
CSDE1-211ENST00000525970 KRT71Q3SY84 523 aa3.66□□□□□ -1.82
CSDE1-211ENST00000525970 ZFP69Q49AA0 526 aa3.66□□□□□ -1.82
CSDE1-211ENST00000525970 HSP90AB3PQ58FF7 597 aa3.66□□□□□ -1.82
CSDE1-211ENST00000525970 MS4A13Q5J8X5 152 aa3.66□□□□□ -1.82
CSDE1-211ENST00000525970 CTSL3PQ5NE16 218 aa3.66□□□□□ -1.82
CSDE1-211ENST00000525970 FAHD2BQ6P2I3 314 aaPredicted RBP3.66□□□□□ -1.82
CSDE1-211ENST00000525970 TTC5Q8N0Z6 440 aa3.66□□□□□ -1.82
CSDE1-211ENST00000525970 UBE2J2Q8N2K1 259 aa3.66□□□□□ -1.82
CSDE1-211ENST00000525970 NECAB1Q8N987 351 aa3.66□□□□□ -1.82
CSDE1-211ENST00000525970 MFSD9Q8NBP5 474 aa3.66□□□□□ -1.82
CSDE1-211ENST00000525970 OR5L2Q8NGL0 311 aa3.66□□□□□ -1.82
CSDE1-211ENST00000525970 CRYGNQ8WXF5 182 aa3.66□□□□□ -1.82
CSDE1-211ENST00000525970 GTF3AQ92664 365 aaKnown RBP3.66□□□□□ -1.82
CSDE1-211ENST00000525970 FAHD2AQ96GK7 314 aa3.66□□□□□ -1.82
CSDE1-211ENST00000525970 TUBGCP2Q9BSJ2 902 aa3.66□□□□□ -1.82
CSDE1-211ENST00000525970 CHRDL1Q9BU40 450 aa3.66□□□□□ -1.82
CSDE1-211ENST00000525970 GLIPR2Q9H4G4 154 aa3.66□□□□□ -1.82
CSDE1-211ENST00000525970 ELL3Q9HB65 397 aaPredicted RBP3.66□□□□□ -1.82
CSDE1-211ENST00000525970 GLRX2Q9NS18 164 aa3.66□□□□□ -1.82
CSDE1-211ENST00000525970 WRAP73Q9P2S5 460 aaPredicted RBP3.66□□□□□ -1.82
CSDE1-211ENST00000525970 THEGQ9P2T0 379 aa3.66□□□□□ -1.82
CSDE1-211ENST00000525970 SCML2Q9UQR0 700 aa3.66□□□□□ -1.82
CSDE1-211ENST00000525970 TIMM10BQ9Y5J6 103 aa3.66□□□□□ -1.82
CSDE1-211ENST00000525970 IGHV3-16A0A0C4DH30 117 aa3.65□□□□□ -1.83
CSDE1-211ENST00000525970 TEX48A0A1B0GUV7 120 aa3.65□□□□□ -1.83
CSDE1-211ENST00000525970 OR6C65A6NJZ3 312 aa3.65□□□□□ -1.83
CSDE1-211ENST00000525970 FOXI3A8MTJ6 420 aaPredicted RBP3.65□□□□□ -1.83
CSDE1-211ENST00000525970 G3V4G9 280 aa3.65□□□□□ -1.83
CSDE1-211ENST00000525970 SOCS3O14543 225 aa3.65□□□□□ -1.83
CSDE1-211ENST00000525970 UPK3AO75631 287 aa3.65□□□□□ -1.83
CSDE1-211ENST00000525970 PGK1P00558 417 aa3.65□□□□□ -1.83
CSDE1-211ENST00000525970 SERPINB2P05120 415 aa3.65□□□□□ -1.83
CSDE1-211ENST00000525970 ASGR1P07306 291 aa3.65□□□□□ -1.83
CSDE1-211ENST00000525970 SNRPCP09234 159 aaKnown RBP3.65□□□□□ -1.83
CSDE1-211ENST00000525970 GZMAP12544 262 aa3.65□□□□□ -1.83
CSDE1-211ENST00000525970 GALP22466 123 aa3.65□□□□□ -1.83
CSDE1-211ENST00000525970 ATP5A1P25705 553 aaKnown RBP3.65□□□□□ -1.83
CSDE1-211ENST00000525970 PPP2R1BP30154 601 aa3.65□□□□□ -1.83
CSDE1-211ENST00000525970 PEX19P40855 299 aa3.65□□□□□ -1.83
CSDE1-211ENST00000525970 FNTAP49354 379 aa3.65□□□□□ -1.83
CSDE1-211ENST00000525970 SRSF5Q13243 272 aaKnown RBP3.65□□□□□ -1.83
CSDE1-211ENST00000525970 LAGE3Q14657 143 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms