RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 MTHFD2LQ9H903 347 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 PNPLA3Q9NST1 481 aa4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 GID8Q9NWU2 228 aa4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 MED11Q9P086 117 aa4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 SPRR3Q9UBC9 169 aa4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 ERRFI1Q9UJM3 462 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 SLC13A4Q9UKG4 626 aa4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 MKLN1Q9UL63 735 aa4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 ZNF232Q9UNY5 417 aa4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 VDAC3Q9Y277 283 aa4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 SLC35A3Q9Y2D2 325 aa4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 MEMO1Q9Y316 297 aa4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 SLC6A5Q9Y345 797 aa4.91□□□□□ -1.62
HMGB1P40-201ENST00000525121 NPIPA5A0A0B4J1W7 369 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 A0A0G2JPF8 293 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 C7orf72A4D263 438 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 CLEC18AA5D8T8 446 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 GMNCA6NCL1 334 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 GJE1A6NN92 205 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 HNRNPCL2B2RXH8 293 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 HNRNPCL3B7ZW38 293 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 NPIPA7E9PJI5 369 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 H3BML4 177 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 MRASO14807 208 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 SEC14L5O43304 696 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 HNRNPCL1O60812 293 aaKnown RBP4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 ZG16O60844 167 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 TNFRSF21O75509 655 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 UGT2B17O75795 530 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 LDLRP01130 860 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 NPPAP01160 153 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 DBIP07108 87 aaKnown RBP4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 UBTFL6P0CB48 400 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 NPIPA8P0DM63 369 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 HNRNPCL4P0DMR1 293 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 FCGR2AP12318 317 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 CPN1P15169 458 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 IL7RP16871 459 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 BMP7P18075 431 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 PGCP20142 388 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 AGAP20933 346 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 SLC6A2P23975 617 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 ELK4P28324 431 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 CHRNB4P30926 498 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 LSP1P33241 339 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 ZFP36L2P47974 494 aaKnown RBP4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 SLC6A8P48029 635 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 P2RX1P51575 399 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 ZNF117Q03924 483 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 SRYQ05066 204 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 CRYZQ08257 329 aaKnown RBP4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 PMPCAQ10713 525 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 KLF10Q13118 480 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 RGNQ15493 299 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 CD226Q15762 336 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 BCL2A1Q16548 175 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 SGCBQ16585 318 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 ZSWIM7Q19AV6 140 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 TRMT5Q32P41 509 aaKnown RBP4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 GTDC1Q4AE62 458 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 COQ5Q5HYK3 327 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 COX20Q5RI15 118 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 PDSS1Q5T2R2 415 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 LRIF1Q5T3J3 769 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 PRAMEF8Q5VWM4 474 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 PRAMEF7Q5VXH5 474 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 VASNQ6EMK4 673 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 TYW3Q6IPR3 259 aaKnown RBP4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 PPP4R4Q6NUP7 873 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 CLEC18BQ6UXF7 455 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 APOOLQ6UXV4 268 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 FRRS1Q6ZNA5 592 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 P4HA3Q7Z4N8 544 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 FGD2Q7Z6J4 655 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 ZAR1Q86SH2 424 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 MRGPRGQ86SM5 289 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 GRAMD2AQ8IUY3 354 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 LACC1Q8IV20 430 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 FUNDC1Q8IVP5 155 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 SLC30A8Q8IWU4 369 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 CHERPQ8IWX8 916 aaKnown RBP4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 ZNF440Q8IYI8 595 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 ULK2Q8IYT8 1036 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 UBQLNLQ8IYU4 475 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 METTL25Q8N6Q8 603 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 ANKFN1Q8N957 763 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 CLEC18CQ8NCF0 446 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 OR5W2Q8NH69 310 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 ZNF563Q8TA94 476 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 BBS10Q8TAM1 723 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 CA5BP1Q8WTZ4 195 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 WDR60Q8WVS4 1066 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 C10orf82Q8WW14 230 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 SMPDL3BQ92485 455 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 SDCCAG3Q96C92 435 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 NTNG2Q96CW9 530 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 AURKBQ96GD4 344 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 CCDC120Q96HB5 630 aa4.9□□□□□ -1.63
HMGB1P40-201ENST00000525121 ZNF317Q96PQ6 595 aaPredicted RBP4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms